Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name CAB39
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name calcium binding protein 39
Also known as CGI-66|MO25
Coordinate chr2:230712842-230821075
Strand +
Gene summary Enables kinase binding activity and protein serine/threonine kinase activator activity. Involved in intracellular signal transduction; peptidyl-serine phosphorylation; and positive regulation of protein phosphorylation. Located in extracellular exosome. Implicated in hepatocellular carcinoma. Biomarker of hepatocellular carcinoma and pancreatic cancer. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from CAB39

Retroname Coord Strand Genomic Region ENSG
CAB39P1 chr5:60630761-60630977 + Intergenic
ENSG00000251303 UCSC

Expression

Transcript Sequences

>XM_011511350.2
GCAGTGCGCACGTCAAAGCCGGGCTCGGGCCGCAAGCGGGGCGAGGGGTTCGGGGAGCGGCGCGGCCTGGGAGACACAGAGCCTTCAGGCGCCGGGGCGGGGGCACAGGCGAAGACTAAGGCGGCGCCGGGCCccacagcagcagccgcagcccaagcgagcgcagcagcgcggcggcagccgcgggagcccctgggcagccgtccgcccgcgcagccgccgccgccgcgggagccCGTCGCCGGGAGCAGGAGCGGGCGGAAGACAACGGAGGGGCCGAGCGTCCGAGCCACTCCGCGGGGACCGAACGAGCAGCCCGAAGCGGCGGCGGCCGAGGACGGGGACAGCGACGACGCGGAGGCAGAGAAGGGAACGCCCGGCCCAGCCCCGTAGCACAGGCGGAGTGCAGCGGAGGCCCCTGCCGCTGCCGTCATGCCGTTCCCGTTTGGGAAGTCTCACAAATCTCCAGCAGACATTGTGAAGAATCTGAAGGAGAGCATGGCTGTTCTGGAAAAGCAAGACATTTCTGATAAAAAAGCAGAAAAGGCTACAGAAGAAGTTTCCAAAAATCTGGTTGCCATGAAAGAAATTCTGTATGGCACAAATGAAAAAGAGCCTCAGACAGAAGCAGTAGCTCAACTTGCTCAAGAACTCTATAATAGTGGGCTCCTTAGCACCCTGGTAGCTGATTTACAGCTCATTGACTTTGAGGGCAAAAAAGACGTGGCTCAAATTTTCAACAATATTCTCAGAAGACAAATTGGTACGAGAACTCCTACTGTTGAATACATCTGCACCCAACAGAATATTTTGTTCATGTTATTGAAAGGGTATGAATCTCCAGAAATAGCTCTAAATTGTGGAATAATGTTAAGAGAATGCATCAGACATGAACCACTTGCAAAAATCATTTTGTGGTCGGAACAGTTTTATGATTTCTTCAGATATGTCGAAATGTCAACATTTGACATAGCTTCAGATGCATTTGCCACATTCAAGGATTTACTTACAAGACATAAATTGCTCAGTGCAGAATTTTTGGAACAGCATTATGATAGATTGCCCCACATTTCTGCTGCATACAAATAGAGAGAAagggaggcagcagctgataggatgagagcagcactggccagaggggacgggagcccggctctgctcctgctctactgctcactcctttgtggccatggccaaggcagttaaccgcttggggacttagaagtccgtccttattgtaaaatgaggacattggactagcttgtcggtaaggtcccttccagcactgaGTCAATGTCAGATGTTCCTGGTAATAGTGTCCCCCAGAGATTTGTCAATGATTTCCAGAGTGCTTGATAGCTTGATTTCCCTAGACCCGCACAACTGCCTCTAGGGCTGCCATGTGAAATGATCTCTTCCACCACTGCCAGTTCTGCCAGCCTCAGGAGGATCTTCCACAATACCCACAAGCACTGTTGTGATGTACTGGTTTAACTACACATCGTCGAAGATTCTGATAGGTACCCGTAAAGAGGTTAGAAGAATGACAATCCACTTAAAACTCCTGTCTATCCTGCAAAATTTGGTTTAGATTTTAATTTTTCCACTACTCATTTAAATTTTTGAAATCCTGAGTATTATTAATACTTCATTATTCACTTTGCTGTTCAAATACATTCTGAGATTCTTAGAGGCAAAAATCTATGCTTGCTTGTTCTTTTGTGGGTTTTTTTCCCTGTCTTTTCCCCCTGCCCTCCACTCCCAGTAAGAACATAACACAACACTGAGCACACAAGTCCTTCATAAGTAGCCTCATAAATGGCTTAAAAATTGCTGGTCCTTTATTTTTATTTCAGCTCATGTGTATTTGGATATGGGTGCGTTTCTTGTATGTTCATTGCTTTAAAATGGCAGTTCTGTCATCATCAGGGCCTTTTTacagtagatagaagcatggacttgagccttggactgcctggattctggctgcaagtctcagccctaccatgggctggtaggacttcagcaactgccttcatgcaccctctgtgccttcaggatcttccaccctgaagaaagctcttcatatagtacctgtctactgggatcatcatgaggattagataagaacgtgtatgtgacgtgcatggcacagtgcctggaacacaggaagcacttaataaacgttagttCATTTATCATCACCACAAAGATTTTTCAACATACTAGTAATTTAAGGCCTACCAAAGACACAGACTAGCTGATTTCCAAGACATTTGCTACAGTGAAATCTGTTTAATCTTGCAGTAAAATAGCTTCCTACATGTTGTTAATAGATGACATCAGTTAACAGGATTTTAGAAGAACATATGTGAGGCAACAAATCTATAGAAAGCAGTCAGATCTTATAGAGGGAGAAGCAGTGGGGGATGTGGGTAATTtaaagccacaggtgaggttattacaccaaaataacatgctctaaattctgatccagtttggctctgagctttctaataaccaaagcgtagaaagaaataaaacaattaaaagatgacagtatttgtagagtaaaattcatgctggctgctcaaaagaaacgtagcctttcctagcactgggacctgaaaccggtttctctccttggcgttcttaaaggagagtcaagttacagtatcatgtagtggacagtcattgccgtggcattgcagtaaataaaatgctcaactccgatgcagttccctgaaagcaagtctttgaggaacccagaagtgggtgggaggacaggtatctaggtttgttacttactctttgtctgtcctaatacagagaagaaaaaatctaacataacctgaaggaaacaggggccacatacatacttttcaggcagttctccatgaaaagtttcttgcaaccaagcttatccaaagatgcagcagaaaatcttaacttgcattttctgtatatataagaacttgagatgtatatattttgttactgattaaaagcaggtccagttgttttgatcatcagtttgatgataatttgagaaggtagacttaacagctttttctgaaaagagagaaatctaactcaaatacataccaaatagatggccagctcacctctgccaagaggcaggcagaagaaataATGTATAATTCTGTGTTAGCTCTAAACCAagaaggccagaaagcaaatttttgaggctttgtaagccatgtggtctctgttgactctcctgtctgttgttctatgaaagcagctgtaaataatacataaacTTTTCAGTGAATTCATGTTCAGTAAACAAACGAGCATGGGATGTGTTCCAGAAAAACTTTTCACAAACAGGCAGCAGGCCATAGTTTGCCATCCCTTGCTCTAGACCACAGATGAATGGCTAATGAGGACCCATCATAAAGCATGGACACCAGTAGTTCTCTCATGGACAGATGACAAAGCAGGCATCCCCCGGCACTCGCGATGACCAAAGGAAAGTCTCAGGAAAGCACGAAGATCCAACAGTCATACTAGTGCTGCAGACTTTCAGAATGTTTTAAACCTATCTGTGGTTTAAACAGACAGACAAAAAATAAAATCTTAAGGCTAACTGGCCTTGTCTACTAGGTTTTTGAAGGATAGCCTTGGCCCCCAAGTGCCTGTCATTTCGGTTTTGTAACTCTGCTTTAATGGGCTTCTAGCCTTCACCATCCAGCAGTGCCACTCTTGTCAGTGACCGCTGTTTTGAAGGTCTAGTGGACCTGTCAGTTCTTAAATTTGTGGCATTTTGTTCTCCCCGGGGCTTCATTCATACTATGTCCTTCCTTTTTTATCTGCCCAGATTCTCTTTTCTCCCCTCCATTTCTGAGTGAAATCCCTCCCATCCGACAGGTCTGAGACTAAGCCCCACCTTCGTTGTCGGCCTGGTTAACACAATGCTGAATTTCTCCTCTCTTAATTTCTATTCCGAATTACTTTTTCTCTTTGCCTGATACATTGAAAGAGCAGATAACTTTTCTCTTTGTGGTTGTGCTTTGAACAAATTGAATTCTTGTTTATATAAAATACGAGTTTTTCAATCTAACATCAAGATATGAGAGCAGACTCAACAAGCAAAAGTGTGAGGGGTATGGGAGTTAGGTTTTGTGCATAGGGAGCTTGGGGTGACAGAGAGGCCTGGATTTAAGCTCTGTCTGCAGGCCTGGCTGGAACTGGGAAGGGGCTCAGTCCCAGGAGCCCTCTTCATGGAAGGGATTGGTGGGATCACCTGAGAGTCTCAGAGCAAACATGTCAGAGGAAGACATGAAAGAGAGTGGCAGGGGAGCCAGGGCAGCTGTTGGCCTTCATGGTGTGAGAAATGTGTCCTTAAGCTAATTTACAATGTTACCTACCAGTCttttttttttt