Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ATP6V1E1
Plot displaying the genomic locations of a parental gene (in chr22) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ATPase H+ transporting V1 subunit E1
Also known as ARCL2C|ATP6E|ATP6E2|ATP6V1E|P31|Vma4
Coordinate chr22:17592136-17628822
Strand -
Gene summary This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A, three B, and two G subunits, as well as a C, D, E, F, and H subunit. The V1 domain contains the ATP catalytic site. This gene encodes alternate transcriptional splice variants, encoding different V1 domain E subunit isoforms. Pseudogenes for this gene have been found in the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from ATP6V1E1

Retroname Coord Strand Genomic Region ENSG
ATP6V1E1P2 chr18:26951693-26952553 - Intragenic
ENSG00000266549 UCSC
ATP6V1E1P4 chr12:64337948-64338905 - Intragenic
N/A UCSC
ATP6V1E1P1 chr1:42903135-42904421 + Intergenic
ENSG00000225099 UCSC

Expression

Transcript Sequences

>NM_001039366.1
CTCTTCCCATTGGCTGAGAAGGGTCATGAGGATGAACTGTGCAGTCACCTGGCAGGAACCGGAACCCGCGGTTATAAAGTAAAGGAACCCGAGATCTGCGCAGGGGTTCCCTTTGCCGATTTCTCTCACCTCACCTTTCAAACCTAAACTCGAGCCTACTGTTCACCGGCCTAGCATTGCTCTCGCCATGGCTCTCAGCGATGCTGACGTGCAAAAGCAGGCAGAAGAAGAGTTCAACATAGAGAAAGGTCGGCTTGTGCAAACCCAAAGACTAAAGATTATGGAATATTATGAGAAGAAAGAGAAACAGATTGAGCAGCAGAAGAAAATTCAGATGTCCAATTTGATGAATCAAGCGAGACTCAAAGTCCTCAGAGCAAGAGATGACCTTATCACAGACCTACTAAATGAAGCAAAACAGAGACTCAGCAAGGTGGTAAAAGATACAACCAGGTACCAAGTGCTGCTGGATGGACTGGTTCTCCAGGGTTTGTACCAGTTGCTGGAGCCCCGAATGATTGTTCGTTGCAGGAAACAAGATTTCCCTCTGGTAAAGGCTGCAGTGCAGAAGGCAATTCCTATGTACAAAATTGCCACCAAAAACGATGTTGATGTCCAAATTGACCAGGAGTCCTACCTGCCTGAAGACATAGCTGGTGGAGTTGAGATCTATAATGGAGATCGTAAAATAAAGGTTTCCAACACCCTGGAAAGCCGGCTGGATCTCATAGCCCAGCAGATGATGCCAGAAGTCCGGGGAGCCTTGTTTGGTGCAAATGCCAACAGGAAGTTTTTGGACTAAGCCTTCAGGAGGTGGAGCTCGTCGTCAGCTCTCCTGCTGTGATGTGGAAGCTTCTGATATTTGAAGAAACACGAATGTCTCTGTAGCTTCCTCTTCACTGCCCCAGTATTGCTCTGTATTTATCAGCGATGCCCCTCTGTCACTCATGCCTTGCCTAATTGTTCACAATGGTGGAAAGCTTCATGTAATATGATCAGGACCCACCTCCAGTTCTTCTGAAAGTGTGACAGTGTCCAGCCGGTTCTGCAGCACTAGGGGAGGGGGCAGATGGTGGTTGCATGGGCTTCCTGGGTCTCCACTCTCCGTCTGGCCTAAAGGTGATGTATTTGGTGTTTGGCCCTGCAGTCCCCACTCTTGAGGCTTAAGGCGCATGTGGCACACCACTCCTTCCAGCAGTAGTCGCTTTACTGTTACCTGTTTAGGCCTAGAAGTTTTCCCTCATCTGTAAATGTGATTTAAAATCTAAGCCATGAATATGCTTTATTTATTAAAAGAGTTATGCGGATTTAATGTGATTTCTAGTGTAAGGCACTACAAA
>NM_001039367.1
CTCTTCCCATTGGCTGAGAAGGGTCATGAGGATGAACTGTGCAGTCACCTGGCAGGAACCGGAACCCGCGGTTATAAAGTAAAGGAACCCGAGATCTGCGCAGGGGTTCCCTTTGCCGATTTCTCTCACCTCACCTTTCAAACCTAAACTCGAGCCTACTGTTCACCGGCCTAGCATTGCTCTCGCCATGGCTCTCAGCGATGCTGACGTGCAAAAGCAGATAAAGCATATGATGGCTTTCATTGAACAAGAAGCCAATGAGAAAGCAGAAGAAATAGATGCAAAGGCAGAAGAAGAGTTCAACATAGAGAAAGGTCGGCTTGTGCAAACCCAAAGACTAAAGATTATGGAATATTATGAGAAGAAAGAGAAACAGATTGAGCAGCAGAAGAAAATTCAGATGTCCAATTTGATGAATCAAGCGAGACTCAAAGTCCTCAGAGCAAGAGATGACCTTATCACAGGTTTGTACCAGTTGCTGGAGCCCCGAATGATTGTTCGTTGCAGGAAACAAGATTTCCCTCTGGTAAAGGCTGCAGTGCAGAAGGCAATTCCTATGTACAAAATTGCCACCAAAAACGATGTTGATGTCCAAATTGACCAGGAGTCCTACCTGCCTGAAGACATAGCTGGTGGAGTTGAGATCTATAATGGAGATCGTAAAATAAAGGTTTCCAACACCCTGGAAAGCCGGCTGGATCTCATAGCCCAGCAGATGATGCCAGAAGTCCGGGGAGCCTTGTTTGGTGCAAATGCCAACAGGAAGTTTTTGGACTAAGCCTTCAGGAGGTGGAGCTCGTCGTCAGCTCTCCTGCTGTGATGTGGAAGCTTCTGATATTTGAAGAAACACGAATGTCTCTGTAGCTTCCTCTTCACTGCCCCAGTATTGCTCTGTATTTATCAGCGATGCCCCTCTGTCACTCATGCCTTGCCTAATTGTTCACAATGGTGGAAAGCTTCATGTAATATGATCAGGACCCACCTCCAGTTCTTCTGAAAGTGTGACAGTGTCCAGCCGGTTCTGCAGCACTAGGGGAGGGGGCAGATGGTGGTTGCATGGGCTTCCTGGGTCTCCACTCTCCGTCTGGCCTAAAGGTGATGTATTTGGTGTTTGGCCCTGCAGTCCCCACTCTTGAGGCTTAAGGCGCATGTGGCACACCACTCCTTCCAGCAGTAGTCGCTTTACTGTTACCTGTTTAGGCCTAGAAGTTTTCCCTCATCTGTAAATGTGATTTAAAATCTAAGCCATGAATATGCTTTATTTATTAAAAGAGTTATGCGGATTTAATGTGATTTCTAGTGTAAGGCACTACAAA
>NM_001696.4
ATAAAGTAAAGGAACCCGAGATCTGCGCAGGGGTTCCCTTTGCCGATTTCTCTCACCTCACCTTTCAAACCTAAACTCGAGCCTACTGTTCACCGGCCTAGCATTGCTCTCGCCATGGCTCTCAGCGATGCTGACGTGCAAAAGCAGATAAAGCATATGATGGCTTTCATTGAACAAGAAGCCAATGAGAAAGCAGAAGAAATAGATGCAAAGGCAGAAGAAGAGTTCAACATAGAGAAAGGTCGGCTTGTGCAAACCCAAAGACTAAAGATTATGGAATATTATGAGAAGAAAGAGAAACAGATTGAGCAGCAGAAGAAAATTCAGATGTCCAATTTGATGAATCAAGCGAGACTCAAAGTCCTCAGAGCAAGAGATGACCTTATCACAGACCTACTAAATGAAGCAAAACAGAGACTCAGCAAGGTGGTAAAAGATACAACCAGGTACCAAGTGCTGCTGGATGGACTGGTTCTCCAGGGTTTGTACCAGTTGCTGGAGCCCCGAATGATTGTTCGTTGCAGGAAACAAGATTTCCCTCTGGTAAAGGCTGCAGTGCAGAAGGCAATTCCTATGTACAAAATTGCCACCAAAAACGATGTTGATGTCCAAATTGACCAGGAGTCCTACCTGCCTGAAGACATAGCTGGTGGAGTTGAGATCTATAATGGAGATCGTAAAATAAAGGTTTCCAACACCCTGGAAAGCCGGCTGGATCTCATAGCCCAGCAGATGATGCCAGAAGTCCGGGGAGCCTTGTTTGGTGCAAATGCCAACAGGAAGTTTTTGGACTAAGCCTTCAGGAGGTGGAGCTCGTCGTCAGCTCTCCTGCTGTGATGTGGAAGCTTCTGATATTTGAAGAAACACGAATGTCTCTGTAGCTTCCTCTTCACTGCCCCAGTATTGCTCTGTATTTATCAGCGATGCCCCTCTGTCACTCATGCCTTGCCTAATTGTTCACAATGGTGGAAAGCTTCATGTAATATGATCAGGACCCACCTCCAGTTCTTCTGAAAGTGTGACAGTGTCCAGCCGGTTCTGCAGCACTAGGGGAGGGGGCAGATGGTGGTTGCATGGGCTTCCTGGGTCTCCACTCTCCGTCTGGCCTAAAGGTGATGTATTTGGTGTTTGGCCCTGCAGTCCCCACTCTTGAGGCTTAAGGCGCATGTGGCACACCACTCCTTCCAGCAGTAGTCGCTTTACTGTTACCTGTTTAGGCCTAGAAGTTTTCCCTCATCTGTAAATGTGATTTAAAATCTAAGCCATGAATATGCTTTATTTATTAAAAGAGTTATGCGGATTTAATGTGATTTCTAGTGTAAGGCACTACAAA