Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SPA17
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name sperm autoantigenic protein 17
Also known as CT22|SP17|SP17-1
Coordinate chr11:124673904-124697518
Strand +
Gene summary This gene encodes a protein present at the cell surface. The N-terminus has sequence similarity to human cAMP-dependent protein kinase A (PKA) type II alpha regulatory subunit (RIIa) while the C-terminus has an IQ calmodulin-binding motif. The central portion of the protein has carbohydrate binding motifs and likely functions in cell-cell adhesion. The protein was initially characterized by its involvement in the binding of sperm to the zona pellucida of the oocyte. Recent studies indicate that it is also involved in additional cell-cell adhesion functions such as immune cell migration and metastasis. A retrotransposed pseudogene is present on chromosome 10q22.[provided by RefSeq, Jan 2009]

Retrocopy(s) from SPA17

Retroname Coord Strand Genomic Region ENSG
SPA17P1 chr10:75382216-75382899 - Intergenic
ENSG00000236797 UCSC

Expression

Transcript Sequences

>NM_017425.4
AACTAGAAAAACAACCGGAACCGGCGGCACCAGCTCGGAGAGAAAGGAGGTTCCATAGGCAGTTCTTACCAAGAAGATGTCGATTCCATTCTCCAACACCCACTACCGAATTCCACAAGGATTTGGGAATCTTCTTGAAGGGCTGACACGCGAGATTCTGAGAGAGCAACCGGACAATATACCAGCTTTTGCAGCAGCCTATTTTGAGAGCCTTCTAGAGAAAAGAGAGAAAACCAACTTTGATCCAGCAGAATGGGGGAGTAAGGTAGAAGACCGCTTCTATAACAATCATGCATTCGAGGAGCAAGAACCACCTGAGAAAAGTGATCCTAAACAAGAAGAGTCTCAGATATCTGGGAAGGAGGAAGAGACATCAGTCACCATCTTAGACTCTTCTGAGGAAGATAAGGAAAAAGAAGAGGTTGCTGCTGTCAAAATCCAAGCTGCCTTCCGGGGACACATAGCCAGAGAGGAGGCAAAGAAAATGAAAACAAATAGTCTTCAAAATGAGGAAAAAGAGGAAAACAAGTGAGGACACTGGTTTTACCTCCAGGAAACATGAAAAATAATCCAAATCCATCAACCTTCTTATTAATGTCATTTCTTCCTGAGGAAGGAAGATTTGATGTTGTGAAATAACATTCGTTACTGTTGTGAAAATCTGTCATGAGCATTTGTTTAATAAGCATACCATTGAAACATGCCACTTGAAGATTTCTCTGAGATCATGAGTTTGTTTACACTTGTCTCAAGCCTATCTATAGAGACCCTTGGATTTAGAATTatagaactaaagtatctgagattacagagatctcagaggttatgtgttctaactattatcaaatgaataaatcctctctatcacatcccccaaaaatgttctttagctcctgtttcactcctagtggtaaagaatttcactgctttttaaggatagtctatttaattttggaatttttagaaagataagctgggacaaaaatctgcctccttcagcctggccaacatggtgaaaccccatgtctactaaaagtacaaaaattggccaggcgtggtgcgcacacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacctgggaagtggaggctgcagtaagccgagatcgcaccactgcactccagcctgggcgacagagcaagactctgtctcaaaaacaaaacaaaacaaaaaaaaGCCTCTGCCTCCTTGTAAGTTTAACCCACTGGTTTTCATTTATCATACATGTATTCAATCATTTATTGAAAATGTATTGAGTACTATTCATGTGCTGGGAATTAGTAGTGAATACTTGTTCTTACACTCATACAACTTACAATGCTTTATTgttttgctctccagaaccacacagaacaagactaataacatcatattgtaaaaagcaaaagctatcatatcatgctgccttcttcagttaaaacttcccaagtttttAAATATACAATGGTAATGCctgtttaacaaactcagaggctttatctcttttatgttttcaatgattcattcaaatccctagtgccttagttttagaaagttccgtctctcctttttgaggcctctccacccttgattgtccaagaaactgagggttcatgtcttagaccaaagggtgcagttctcttcccaatacaaaaggtagaaagtggagtcttaccatttagttaatgctgttgccttctaccataatgttgtagcatagtccagcagactGAGGTGATTCTCTGGCTGGTTCCAATTCCTGCCTGCACCATAGTGGATGGCCCATGATTTAGTTCCAGGATTACATCTCTCTTGGTTTATAGTCACAAAGCCAGTGTTCCCCCAAAGCTTAAAAACAAGCCAGGATGGCTCAGTCCTGAGGAGATTCTAAAACCAGGTCTATGTTGTCACAACAAATACTCTCCTACAAACACTTTGATCCTTGTCCTAGGCTTAGACATGCTCTTTCTGCAAAGCAGTTTTATTTCAGGTGCCTCACTGCCCTTCCCTGGCACTGAGCCTTTATCAGGCTCTGCAACAGAGGTTCCCCCAAGTGATCGCCACTCAAACACAGTTGATTCACACCAACCCTTTCAAGGTTGTGGCTTTCATTCTCTAATGTCCACTCATACAGGCAGCCTTTCTCCTTCCAAAATCTTGCTGCCACTGTAGAGAGTTTCATGCTAGCTAAACACAAGTCTCTAATATCCCCCTTCCTCTCCTCCTTAACCCCTCTCCTCCAGGCTTACAGAGGAAAAGAAATCAGTTCTCCTCCAGGATTCCAGCTGTTCGTCCCTCCCATTCCACTGAAAGCACCAGCTTCTAACACCTTCCCCTCTCAGACAGAGCCATCCTGCTTAGCGGATTGTCAAGGGGGGACCCAGAATTTATGCAAAGACTTAGATTCCCTGACCTGGAGAGATCAGAAGAGGAAAAAAGGGATTTTTTCCCTAGTGAGTATATAGCAGGAAAAAAAAAAAAGATGAGTTAGCTTTTTCAGTAATTCTCCTGTTATACACATAAAGTGACTAGCACTATGCATTCcatacacacacacacacacacacaGATCTCATGGTAGTGATATTGGTAGTGAAGGAGGAAAAGGAAAAGGTGAGCAATGGATGTGATATTATGAGAACAACACATATGAATGACACTTTATTAGAacttatctggttttcctcttatctctctggctgttccttctcaattcccttcactggtaactcttcaactccccaaccactaaatgctaagtgcccttaggctcagtctttcgaccccatttctacactcacttgatttcctgcagtttcatagctttaaaatccaatcttcttaatgatcactcccagacctttctctcctctgcctgcgaacttctatattcaactgcctacataacatccccatttggatgtctataggcatctcaaaagtaacatataaaaaatgaatcctgatattgcccccaaatctgaaacttcccccacacccaagtttttccattcaaaaatggctgctccattcttccatttgctcaggccaaaaaccttggattcatctttaatgcgtcactttctttcacaccccatatacaatctatcagcaaaacctgtgggctgtacctataaaataatactcagaatctgcctacttctaaccacttccattgttaccgccttggtcctagttcccatgatagccttgtgaattattgcaataacctATATTGGCCAGTGATTATCTCActactactgcacaacccattccaaagttagtggtttaagacaattatattttctcctgggtctgtaggtcagtggtaatgtagctaagctaggctggACTACAATCTCAAGGTTAGGTTCAGGTCAGCTCTAAGCTGTGGGTTTGTGGGCTGACAGGAAGGTCTGCTTCAGGCTGTGGGCCCAAGGGTCAGCTGCAGCACAGTGCCTCTGCTTCACGTGTCCTTTTCTGAGCCCCTGCTGAAAGACGTTATCCAGGACAAGCTCTTCTCATGCTGGTCACAGAAGACAAGCAGGAAAACCCAGCATGCAAGAATATTTCAAGCTTTTGCTC