Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Tsnax
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name translin-associated factor X
Also known as Trax
Coordinate chr8:125739780-125760947
Strand +
Gene summary Predicted to enable A2A adenosine receptor binding activity; RNA binding activity; and endoribonuclease activity. Predicted to contribute to sequence-specific DNA binding activity and single-stranded DNA binding activity. Predicted to act upstream of or within cell differentiation and spermatogenesis. Located in cytoplasm. Is expressed in several structures, including body cavity or lining; genitourinary system; respiratory system; tail; and vertebral axis musculature. Orthologous to human TSNAX (translin associated factor X). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Tsnax

Retroname Coord Strand Genomic Region ENSG
TsnaxP2 chrX:136003713-136005536 - Intergenic
ENSMUSG00000084086 UCSC
TsnaxP1 chr1:177970723-177972951 + Intragenic
ENSMUSG00000102493 UCSC

Expression

Transcript Sequences

>NM_016909.3
AGGCTGCGTGAAGGATCCGCTTCCGGCGGCCGCCTACTGCGACCAGGGTGGTGTGCGCTGTCACCCACGGGCTCAGCGCGGCGTCCCGCGACGGCCTTTCGCTGAGCTGGCCCGGCGGCTGCGATCCCTGCGCGTGCAAGCCGAGGCCCCGCGGCCATGAACGGCAAAGAAGGACCAGGAGGGTTCAGGAAGAGGAAGCATGACACCTTCCCACATAAccaaaggagagaggggaaggatgCCAGTTTGTCTTCGCCGGTGATGCTGGCCTTCAAATCATTTCAGCAGGAGCTGGACGCCAGGCACGACAAATATGAGAGACTCGTGAAGCTAAGCCGGGATATTACTGTGGAGAGTAAGAGGACAATTTTTCTTCTCCATAGGATTACAAGTGCTCCTGATATGGAGGAGATACTGACTGAATCAGAAAGTAAGCTGGATGGTGTCAGACAGAAGATCCTGCAGGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACCACAGgaCTGCAGGAATACGTGGAGGCTGTCTCTTTTCAACACTTCATCAAAACTCGTTCATTGATCAGTATGGAAGAGATTAACAAGCAGTTGACATTTACAGCAGAAGACAGTGGGAAAGAGAGCAAGACTCCTCCCGCGGAAGGACAAGAGAAGCAGCTGGTTACATGGAGACTGAAGCTCACCCCTGTTGACTACCTGCTGGGCGTGGCCGACCTAACTGGAGAGTTGATGCGGATGTGTATTAACAGTGTGGGGAACGGGGACATCGACACCCCCTTTGAAGTGAGCCAGTTTTTACGCCAGGTTTACGATGGGTTCTCGTTCATTGGCAACACTGGGCCCTATGAGGTCTCTAAGAAGCTGTACACCTTGAAACAGAGCCTGGCCAAAGTGGAGAACGCTTGCTATGCCCTTAAAGTCCGGGGTTCTGAGATTCCTAAGCACATGCTGGCAGATGTGTTTTCAGTTAAAACAGACATGATTGATCAGGAAGAGAGCATTTCTTAAGCAGCCCCACTCTGCTCTCTAAGGAGCTCCTGGGCGACCAGTTGGTGAGACTGTTCTGAGTGTGCATCTGAGTTTATTGTGGCTTCTGTAGACGTTCCAAGTTGTACTAGTTTGAAGTTGTAAACAGCTGTATATAAGTTTGTCCACAGGGAGGTTGTTTCTTACACTCCCGCGCATTTGCATACAGTGTTTGTATATGTGCTCGCTCTATTGTTGTGTGAACGTGCTTCCGATTGCACTTTCTGCCACACCTACTTTAGTTCACTTTGAACTTGGAGTGACATTTTGGGTGGAAGGAAGTCTCTTAAGTGGGTGATTCTGTCTATGGAGGGAAAAGTGTGGAGAAGCTTCCTGCGTGCCTACGTTCCTCAGCAGGATCATGGCAGGCCTTTAACGTGGCTCAGTACGTGAAACAGCAGTTTAAATATGGAAGTTATCAGTGTTTTCTAAGTGCAAGTTTTGGTGGTGGTATAATGAGAATTCACTTAAAATTCTGGTCAAGTTTAGGTCGTTTTGAATTCGTAGGAAGCAGTTTTCCTGAAGAGTTGATGGGTATCTGGATGTTCACTTTCCCACGttgtcttttcctttctcacCGATGTGGGAAGGAAGGAGCTGACACTGGTCATCACTGGTGACGCTGAGTAACTGACTCCACACTCGTGTGTAGGTTGTGAGCAGCCAGGCCCTTTGTCGTGTGTTAGGTGTGGTGCACTTGTCTACCCCAGCCGTCCTGGGACCCCAGAGGAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAGCCTTGACCCTGCCCTTGGTGTGAGCTAGCGATGTtgccaaagaaaaagaattgtgaGTAATTCAGCAATAAGACGATGGCCAACACTGGAGGGAGCGTCGGGCGTGGGTTCATCTCCCCAGTCAGTCAGAGTCATCTGTGGTGAGAGCCTGGCTTGAGCGTGGCCTGCGGCTGTCAACGCCACATGCTTTCAACGAGTTCTGTGACTTTTCACAACTTAGATACTGGGCTTTATTTTTGGAAAGAATATCTATTTGTAAGGCTGGTTCTTTGAAAGTGTAATTTTCCAAAAAGTCTcaccaaaagtaaaataaagtgtGTACATGCCTGGTAAGTTAGACTTGTTGTCCTGGTGGTGATGAGGCTTCGCCTTCCTGTAGTAAGATGGACTCCTGAGCTGTAGTCAGTCCTGGTACctgctctgtctgtctggtttttttcAGCTACTTCAAGTGGAATTTATAATGTTAAAATAATGGATTGAAGAATGTTTTACAGAAATTTAAAGcaaactttaaataaaatattaaaatacagcAGCCCTCTGGTTAA