Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snrpa
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name small nuclear ribonucleoprotein polypeptide A
Also known as C430021M15Rik|Rnu1a-1|Rnu1a1|U1-A|U1A
Coordinate chr7:26886431-26895696
Strand -
Gene summary Predicted to enable U1 snRNA binding activity; U1 snRNP binding activity; and identical protein binding activity. Predicted to be involved in mRNA splicing, via spliceosome and regulation of mRNA polyadenylation. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in nucleoplasm. Predicted to be part of U1 snRNP and spliceosomal complex. Is expressed in central nervous system and sensory organ. Human ortholog(s) of this gene implicated in connective tissue disease. Orthologous to human SNRPA (small nuclear ribonucleoprotein polypeptide A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrpa

Retroname Coord Strand Genomic Region ENSG
SnrpaP3 chr12:87732016-87733194 - Intergenic
ENSMUSG00000113280 UCSC
SnrpaP4 chr17:20790455-20791661 + Intergenic
ENSMUSG00000071273 UCSC
SnrpaP2 chr9:101325496-101326672 - Intergenic
ENSMUSG00000061486 UCSC
SnrpaP1 chr1:95183474-95184539 - Intergenic
ENSMUSG00000099592 UCSC

Expression

Transcript Sequences

>NM_001046637.1
CGTAGTTAACCTCTCTAGCTCTCCCTTAGCACGCGGGTTGGAGAAGCGGGGGCCTGTGCTGGCTTTGTTGCTAAGCTGTGACATCCTCTTCCAATTCCGGTCTTACTCGACTTCCTCTTGGAAGGGCGATCCCTGAGCATCAGCCCTTTGGAACAAAGAATTTGGGAAACTTAGGGCTAAAGTcgctttttcctcctctttaagCCGTACCTGAACATCTCACACCATGGCCACCATAGCCACCATGCCAGTTCCCGAGACCCGTGCCAACCACACTATTTATATCAACAATCTCAATGAGAAGATCAAGAAGGATGAGCTCAAGAAGTCCCTGTATGCCATCTTCTCCCAGTTTGGCCAGATCCTGGATATCCTGGTGTCTCGGATCATGAAGATGAGGGGCCAGGCCTTCGTCATCTTCAAGGAGGTCACCAGCGCCACCAATGCCCTGCGCTCCATGCAGGGCTTCCCTTTCTACGACAAGCCCATGCGCATCCAGTACGCAAAGACTGACTCGGACATCATTGCCAAGATGAAGGGCACCTATGTGGAGAGAGATCGCAAacgagagaagaggaagcccaagAGTCAGGAGACACCTGCTGCCAAAAAGGCTGTTCAGGGTGGGGCAGCTGCGCCCGTGGTGGGGGCTGTCCAGCCCGTACCGGGCATGCCACCGATGCCTCAGGCACCCCGCATCATGCACCATATGCCAGGACAGCCTCCCTACATGCCGCCACCTGGCATGATCCCGCCACCAGGCCTCGCTCCTGGCCAGATCCCCCCTGGGGCCATGCCCCCACAGCAGCTCATGCCTGGGCAGATGCCGCCTGCCCAGCCTCTCTCCGAGAACCCACCCAATCACATCCTGTTCCTCACCAACCTGCCTGAGGAGACCAACGAGCTCATGCTCTCCATGCTCTTCAACCAGTTCCCTGGCTTCAAGGAGGTGCGTCTGGTCCCTGGGCGCCATGACATCGCCTTCGTGGAGTTTGACAATGAAGTGCAGGCTGGGGCAGCACGAGATGCCCTGCAAGGCTTTAAGATCACACAAAACAATGCTATGAAGATCTCTTTTGCCAAGAAGTAGCGCCTTTCCCTATGGAGTACCCCagtcccttccccccctcccttgGCTCAGTCCCTGAAGGTAAGTCCCCCTTAGGGACCTTCTCAGAGCCGTGTGTGTGTGGTTGCCACACAGCATTGTACCCAGAGTCTGTCCCCAGACATTGCACCTGGCGCTGTTAGATTGTGATTAAAGTGAGTTTTTGAGGTTTGGTTTTTTA
>NM_015782.3
GCTTCCGAAAGGCAGTCTTAGAATGCACCAGAGCTCTAACCATGTCCCAATTGGCCAGAAGCTCGTGCCCTTCTTTGATTGGTCCGTTCCCTCGCGTCCAGGGGGCGGGACCCCAAGTGTTCCTTTGGCAGACGCTGAGGCCGGGGGAGAGACTCTGAACTTACCGAGTTTGCCCGCCGTGATTAGCTCGCGGAAGGGAGAAGCCGTTGCCGGGGAAGATAGTTGTGTGTCTGTGCAGCGTAGCTCGGCGGGCGTTGTCGGCGGGAGCGACGGCTCAGGTGCCGTACCTGAACATCTCACACCATGGCCACCATAGCCACCATGCCAGTTCCCGAGACCCGTGCCAACCACACTATTTATATCAACAATCTCAATGAGAAGATCAAGAAGGATGAGCTCAAGAAGTCCCTGTATGCCATCTTCTCCCAGTTTGGCCAGATCCTGGATATCCTGGTGTCTCGGATCATGAAGATGAGGGGCCAGGCCTTCGTCATCTTCAAGGAGGTCACCAGCGCCACCAATGCCCTGCGCTCCATGCAGGGCTTCCCTTTCTACGACAAGCCCATGCGCATCCAGTACGCAAAGACTGACTCGGACATCATTGCCAAGATGAAGGGCACCTATGTGGAGAGAGATCGCAAacgagagaagaggaagcccaagAGTCAGGAGACACCTGCTGCCAAAAAGGCTGTTCAGGGTGGGGCAGCTGCGCCCGTGGTGGGGGCTGTCCAGCCCGTACCGGGCATGCCACCGATGCCTCAGGCACCCCGCATCATGCACCATATGCCAGGACAGCCTCCCTACATGCCGCCACCTGGCATGATCCCGCCACCAGGCCTCGCTCCTGGCCAGATCCCCCCTGGGGCCATGCCCCCACAGCAGCTCATGCCTGGGCAGATGCCGCCTGCCCAGCCTCTCTCCGAGAACCCACCCAATCACATCCTGTTCCTCACCAACCTGCCTGAGGAGACCAACGAGCTCATGCTCTCCATGCTCTTCAACCAGTTCCCTGGCTTCAAGGAGGTGCGTCTGGTCCCTGGGCGCCATGACATCGCCTTCGTGGAGTTTGACAATGAAGTGCAGGCTGGGGCAGCACGAGATGCCCTGCAAGGCTTTAAGATCACACAAAACAATGCTATGAAGATCTCTTTTGCCAAGAAGTAGCGCCTTTCCCTATGGAGTACCCCagtcccttccccccctcccttgGCTCAGTCCCTGAAGGTAAGTCCCCCTTAGGGACCTTCTCAGAGCCGTGTGTGTGTGGTTGCCACACAGCATTGTACCCAGAGTCTGTCCCCAGACATTGCACCTGGCGCTGTTAGATTGTGATTAAAGTGAGTTTTTGAGGTTTGGTTTTTTA