RCPedia: Genes

Summary

Gene Name	Gpatch11	Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Mus musculus
Full Name	G patch domain containing 11
Also known as	2310002B06Rik\|Ccdc75
Coordinate	chr17:79142897-79155737
Strand	+
Gene summary	Predicted to enable nucleic acid binding activity. Predicted to be located in chromosome, centromeric region. Predicted to be active in kinetochore. Orthologous to human GPATCH11 (G-patch domain containing 11). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Gpatch11

Retroname	Coord	Strand	Genomic Region	ENSG
Gpatch11P1	chrX:63987732-63988626	+	Intergenic	ENSMUSG00000081514	UCSC

Expression

Transcript Sequences

>NM_181649.6
GGGTCCTGCGCCAATTGCACGGCGCATGCGCAGCGCGACCTCCGCGGAGCTGGTTCCGGGCAGTAAAGCTCCGGCTTCAGGGTGTGCGGGCGCTCAGGAGAATGACAGAGGTCGGTGCAAGTTGGCTGTGACTGCCTATCACAGCGTCAGCTACGCCCCATCCGAACAAGATCACCAAGACTTGTATTCTTTGTGGTTGTGAACCAATTATTTAGCCACAttgagcctcagttttccctGCTGGAAAGTGGAACTAATACTTCTTATCTACTGGGCTGCTCCTAAGCTAGGTAGTGTTGTCAGATGAAGGAGAgcatgacagaagaggaggaCTATATGTCGGATTCCTTCATTAATGTTCAAGAAGATGTCAGACCCGGTGTGCCGATGCTGAGGCAGATCCGAGAAGCCCGTcggaaagaagaaaagcaacagCAAGCTAATCTGAGAAACAGGCAGAAGAGCGTAAAAGAAGAAGAGCGGGAAAGACGTGACATCGGGTTGAAGAATGCACTCGGCTGTGAAAACAAAGGGTTCGCTCTGCTCCAAAAGATGGGATACAAGAGTGGGCAGGCTCTAGGCAAGAGCGGAGATGGTATTGTTGAACCAATTCCTCTCAATGTCAAAACAGGAAAAAGTGGCATAGGTCATGAGTCATCATTAAAACGGAAAGCGGAGGAGAGGCTGGAAAACTACAGGAGAAAAATTCAcatgaaaaaccaaaatgaagcaAAGGCCGCCGAGGAGTTTCGGATGCGACTGAAGAGTAAGCAGGATGAAATGAGGCTCGAAGGAGACCTGAGAAGAAGCCAGCGAGCTTGCCAGCAGCTGGATGCCCAGAAGAATATTCAGGTTCCCAGGGAGGCGTGGTACTGGCTGAGGCCTGAAGAGGAGaccgaggaagaggaagaggaaaaggaagaacagGATGAAGATGAGTGCCCGAGTGAAgatttgagtGTGCTAGAAAAGCTGCAGATCCTCACTGGCTACTTGCGAGAAGAGCACCTGTATTGCATTTGGTGTGGGACAGCCTATGAAGATAAAGAAGACTTATCTTCGAATTGCCCAGGACCGACCTCTGCGGATCACGACTGAGATTGTTCCCAATAAAGGGAAATCATTTACGTGAGTGGGGAAAGGAGGCCTTTGTATAGCACTTTATTCTTTCTGAAATGTGTTCTTTGGATAAAACTgctcactgatttagaaaaatgttACTCTTACTTCCAAATACAACTATCATAGACATGAACAGTTACAAGTGATGTGGCATTGTGACGTTTGTCCAGTTTAAGGGTACCAACAGGTTACGTACTCAGTCCCCTCCTTACTTTGGATAAATTGAGAAGTAAGATCGGAATCAGGAAGAAGCCAGTTGTCTGCTTTAGCCTTGCGATGCACCTGTATGGTAGAGGGCCTGCCTAGCCTGTGCAGGACAGGATCCTGAGTTCAGCCGCCAGCACAAGCTAAGCTCATTGGCGTGAAGCTGGAATCCAGGACAAGGCCAGCTCTTTCTAACCAAACTACCTAAGAGTAATTTGGAGAAATGGCACGCCCGGCCTCTGCTGTGGAGTCTGCTTTGTGTTCTAGAACTGGTGTCTTGAAGTAGTTTTATCCTGATTTGTCTTTCAACATAGCTGTTGAGAATACCAGATAGCATTTTCTAGGCGCTAGTTCTCTGGAGTAAAGAGCACACCACTGGCTGAGTAGTCTGTCAGATTAAAACACTTCTCTGttggaaaggaaggaatgaagagtcAGAGGATTCCATACTTCTGGGTCATGTCCAGGGTCAGACCTCAAAGTCATGGGTGTTTTTCCAAGTGTGCATGCTCAAGGATCCCCTCTAGTGGACCCATCTGAACTGGTCAGTACTTAAATACCCACTTTTTAAACTCCAAGAGTATGCGGCAGCATGCGTTGCTTTCTGAAACACCACACCATCACAAGGGAAAACGTTCCAGAGGAGTGCCTGAAGGGACGCAAAGTGGTCAGCACAGTGCAGCCCGGATCAGCGGGAGGACTAGAGCCAACTTACCCTGGGTGACCAGGCAACATCCCTGTGGCACTACACTACACTGTGGTGACCAGGCGACATCCCAGTGGCACTACACTATGCTCTGGGTGACCAGGCGACATCCCAGTGGCACTACACTACACTCTGGGTGACCAGGCGACATCCCAGTGGCACTACACTACGCTCTGGGTGACCAGGCGACATCCCAGTGGCACTGCACTACGCTGTGGGTGACCAGGCGACATCCCAGTGGCACTACACTACGCTGTGGGTGACCAGGCGACATCCCAGTGGCACTGCACTACGCTGTGGGTGACCAGGCGACATCCCAGTGGCACTACACTACGCTCTGGGTGACCAGGCGACATCCCAGTGGCACTACACTATACTCTGGGTGACCAGGCGACATCCCAGTGGCACTACACTACAGTTAGGATTAAAGTCAGTGCTGGTATAACTGTACCTATCTAAACCATGGGGACACCACGAGTCACTTCCTGGGTATGGCATTCCACAGACATATGACTAGTTCCTCAAGCAAATGTTGagagtaaagaaaacacatggagtaTGCCGTCAAGTAAAAGGACATGTCACCCAAAAGTAACCGTGGATCTTCCTGATTTTTAAGATTGTAAACTGAATTTGGACTAATTATGTGAAAATTATACTTCTTAGTTTGTCTGAGAAACAGTGGTATATGATTTTGTTACTGTTACAAAGAACTTACCTATTACAAGtcaacttttaaatatttatagggGGTTGgcaagatggatcagtgggtaagaacactgactgctctaccaaaggtcctgagttcaaatccacatggtggctcacaaccacctataatgagatctgatgccctcttctgatgtgtctgaagacagcaacagtgtacttaattataataataaatatatctttcggcctgagcaagcagagttgaccggTCGAGCGTGGTGGGGCCGACCAGAgggagcagggttgaccagagcaaacAAAagccctaaaaattcaattcccaacaaccacatgaaggctcacatccatctgtacagctacagtgtactcacatacataaatcttttaaaaaaaaaaaaagaatgacagccTAAATATTTATGGCTACAACTGAGGAGCTCAGCATAAcaacaaaggtaaaatatttGTTAAGGCTGCACAATGATATATATACAGACTCACTCTTGGGTGTTTGAAGATGAAAATTGTGAGGATTAATATTGAACAAAAATATTCCTTACAATAAAATGTTAATGTGCCTCGAGTTCTGGTGACCATTCAAGTAGGAATGTTTGTTATGTCTGACTAGTGAGTCTGCAGATGGTGGAGACTTGGAGAAGCTGACAGTCAGACATGCATGTAGCTATGTACACAAGGTACACTTAATGGGCATGCAGCCCGTACAGTTGCATAAGACCATGCAACTGTCCCACACTTAGCCTCTGAAAAAGCACCCTATATTGCATTTTAAACTGGGTGCCACCATTATGCAACCaaccatacatgtatataataacataaatatatgtgtgtatggatagATTATGACTATATCTGATATAGTTATATTACATCTACAGGTATGTGTTTGTgacatatatgtatttaatagAAATGATATATTTACTCGGATAAAAATTTCCTAGTGAAGCCACCAGGTAAAAAAGTTTCTTTCAAAAGTGCCCCTGGCATGAGTAAGTGAGGCTCTACTCTGCCCTGCTGTTCCCTGAGTAAGATACTTGGGATTTCCTGGTTTGGAGGCTGAGAAAATATATCCTTAGAAGTACATAAAAATGCCAAAAAGATAACATACATATTTCATAATGTAAAAATACCAGTAAGAGAAGGGTAAAATGTTATACTCTCCCTGACCATATTATTTTGGTATTCCTCTTAAATAGAGGAATTTGTTCATCAAAGCTAATATTAGTCTGTTTTCAAAGAAATTTCaaagaaatttgaaaaatgtAGGCCAAATACCTACGTATCTTCATTTCTATGTGGCAGTGGCTAACATCTCCCACAgctgctctctctttcttctttctctgtaactctagctccagggcatctgatgccctattTTGGCCTGGGCTGTCACTACGCTCACATACAAAGACATggacatgcaaataaaataaatatttttttaaaagaata