Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pdlim1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name PDZ and LIM domain 1 (elfin)
Also known as CLP36|Clim1|mClim1
Coordinate chr19:40210683-40260060
Strand -
Gene summary Enables transcription coactivator activity. Acts upstream of or within regulation of transcription by RNA polymerase II. Part of transcription regulator complex. Is expressed in several structures, including alimentary system; branchial arch; genitourinary system; heart; and sensory organ. Orthologous to human PDLIM1 (PDZ and LIM domain 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pdlim1

Retroname Coord Strand Genomic Region ENSG
Pdlim1P2 chr11:30856619-30857961 - Intragenic
 ENSMUSG00000084146 UCSC
Pdlim1P1 chr5:32577271-32578676 + Intergenic
 ENSMUSG00000107211 UCSC

Expression

Transcript Sequences

>NM_016861.4
GGGGCTGCAGCGACGCGGCCGGGGCGGATCTGTCCCCGCCCTCGCTCGCGACCCCGCCCGTCCCAGGATCTCCCAACTCCCGCCGCGCGCTCTTTCTCCGACAGCTGCTCCGGGAGCCCCGCGCGCCGTGCAGTTCTGTGCCTTGCCTGTCTGTCCCTTCCGATTGTGCCTAGCGATGACCACCCAGCAGATTGTTCTCCAGGGCCCGGGTCCCTGGGGTTTCCGCCTCGTGGGCGGCAAGGACTTCGAACAACCTCTCGCCATTTCCCGGGTCACTCCCGGAAGCAAGGCTGCTATAGCGAATTTATGTATTGGAGATTTAATCACAGCCATCGATGGGGAAGATACCAGCAGCATGACACACTTGGAAGCTCAGAACAAAATCAAGGGCTGCGCAGACAACATGACGCTCACAGTATCCAGGTCTGAACAGAAGATTTGGTCTCCTCTAGTGACCGAGGAGGGGAAACGTCATCCCTACAAGATGAATTTAGCGTCGGAACCCCAAGAAGTCCTGCACATAGGAAGTGCCCACAACCGAAGTGCCATGCCATTTACTGCCTCACCTGCTCCCAGCACCCGGGTCATCACAAACCAGTACAACAGCCCAACTGGCCTCTACTCATCCGAAAACATCTCTAACTTCAACAATGCTGTGGAGTCGAAGACCTCAGCCAGTGGGGAGGAGGCGAACAGCAGGCCCGTGGTTCAGCCTCATCCCTCCGGCAGCCTTATCATTGACAAGGACTCTGAAGTTTACAAGATGCTTCAGGAGAAGCAAGAATTAAACGAGCCCCCCAAACAGTCCACATCCTTCCTGGTTCTGCAGGAGATCCTGGAGTCAGATGGGAAAGGGGATCCCAACAAGCCATCAGGATTTAGAAGTGTTAAAGCTCCAGTCACCAAAGTGGCTGCATCTGTTGGAAATGCTCAGAAGCTGCCCATCTGTGACAAATGTGGAACTGGTATTGTTGGTGTGTTTGTGAAGCTGAGGGATCACCATCGCCACCCTGAATGCTATGTGTGCACCGACTGTGGCATCAACCTGAAACAGAAGGGCCATTTCTTTGTAGAGGATCAGATCTACTGTGAAAAGCATGCCCGGGAGCGGGTCACTCCGCCTGAGGGCTACGATGTGGTCACAGTGTTCCGCGAGTGATGGAGAGGACCTGCCCTGTCTACTGCCCTCCAGCCAGCCTGCTGCACCTGGTTCTCGGAATATTCTGGCTCTCTCCTCCCTGACAGTCCTGTGCTTACTTAGTGTTAGTCATGCGCAATAAACATTGGGTTTCGTCTGGGCTGACTGACTCCCACTGGCAGGGTGACATCTGCTTTTATATTATTGGGAGATGGTTTTGTCCCTGTCCCTTCACCCACACCTCAATGCACCTTCTTCACTTGGAGTCTTCTCTGCTGCAAATGGACATTGGTCCATTGGAACTAAGCCAAATGTAGTATCTCTGATGTTACTTGGTTTTACTTAATAAATTTAGACTTTAAAGCAA