Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl36
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L36
Also known as -
Coordinate chr17:56917094-56921246
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in synapse. Is expressed in brain. Orthologous to human RPL36 (ribosomal protein L36). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl36

Retroname Coord Strand Genomic Region ENSG
Rpl36P1 chr1:181227999-181228221 - Intragenic
ENSMUSG00000089888 UCSC
Rpl36P19 chr10:69401842-69402226 - Intragenic
ENSMUSG00000112729 UCSC
Rpl36P17 chr10:116475195-116475364 + Intergenic
ENSMUSG00000112436 UCSC
Rpl36P18 chr10:129999686-129999858 + Intergenic
ENSMUSG00000112688 UCSC
Rpl36P20 chr11:10326739-10326992 - Intergenic
ENSMUSG00000084045 UCSC
Rpl36P22 chr11:76492106-76492485 + Intergenic
ENSMUSG00000024205 UCSC
Rpl36P21 chr11:116395406-116395683 + Intergenic
ENSMUSG00000081318 UCSC
Rpl36P23 chr12:12961987-12962373 + Intergenic
ENSMUSG00000066629 UCSC
Rpl36P24 chr12:31284655-31284877 + Intergenic
ENSMUSG00000112518 UCSC
Rpl36P25 chr15:82404078-82404441 - Intergenic
ENSMUSG00000116490 UCSC
Rpl36P26 chr15:96664623-96664783 - Intergenic
ENSMUSG00000095638 UCSC
Rpl36P27 chr15:98903922-98904258 + Intergenic
ENSMUSG00000064081 UCSC
Rpl36P30 chr17:94915575-94915961 + Intergenic
ENSMUSG00000117476 UCSC
Rpl36P31 chr18:64561401-64561656 - Intergenic
ENSMUSG00000118375 UCSC
Rpl36P32 chr18:82747921-82748099 - Intergenic
ENSMUSG00000117849 UCSC
Rpl36P33 chr19:38330832-38331089 - Intergenic
ENSMUSG00000118381 UCSC
Rpl36P2 chr2:32161821-32162207 + Intergenic
ENSMUSG00000066068 UCSC
Rpl36P3 chr2:35381212-35381539 - Intergenic
ENSMUSG00000081421 UCSC
Rpl36P4 chr2:48278012-48278397 + Intergenic
ENSMUSG00000083866 UCSC
Rpl36P5 chr3:99915639-99916025 + Intragenic
ENSMUSG00000080754 UCSC
Rpl36P7 chr4:45338725-45338998 - Intergenic
ENSMUSG00000083541 UCSC
Rpl36P6 chr4:116697080-116697419 - Intergenic
ENSMUSG00000075390 UCSC
Rpl36P9 chr5:56314860-56315012 + Intergenic
ENSMUSG00000105685 UCSC
Rpl36P8 chr5:137431213-137431565 + Intragenic
ENSMUSG00000106476 UCSC
Rpl36P10 chr6:108117092-108117470 - Intragenic
ENSMUSG00000091845 UCSC
Rpl36P12 chr8:123563258-123563523 + Intergenic
ENSMUSG00000110525 UCSC
Rpl36P14 chr9:35192780-35193166 - Intergenic
ENSMUSG00000066771 UCSC
Rpl36P15 chr9:44521675-44522040 - Intragenic
ENSMUSG00000111301 UCSC
Rpl36P16 chr9:73082680-73083041 - Intragenic
ENSMUSG00000066478 UCSC
Rpl36P34 chrX:51871537-51871930 - Intergenic
ENSMUSG00000081843 UCSC
Rpl36P35 chrX:70541946-70542204 - Intergenic
ENSMUSG00000084114 UCSC
Rpl36P29 chr17:88228510-88228845 + Intragenic
ENSMUSG00000093922 UCSC
Rpl36P11 chr7:30009567-30009781 - Intragenic
N/A UCSC
Rpl36P13 chr9:110618859-110619245 - Intergenic
N/A UCSC
Rpl36P28 chr17:64499524-64499792 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_018730.3
AGGATTCTGCGCGGTGCCGTTCTTCCTGTCCCGGCCGCCATCGGAGAGCATCAGCCATGGCTCTGCGCTACCCCATGGCCGTGGGCCTCAACAAGGGCCACAAGGTGACGAAAAACGTCAGTAAGCCGAGACACAGCCGGCGACGCGGGCGCCTCACCAAACACACCAAGTTCGTGCGGGACATGATCCGGGAGGTGTGCGGCTTCGCACCCTACGAGCGGCGAGCCATGGAGTTGCTCAAAGTGTCCAAGGACAAGCGCGCACTCAAGTTCATCAAGAAGAGGGTGGGCACGCACATCCGCGCCAAGAGAAAGCGGGAGGAGCTGAGCAACGTGCTGGCAGCCATGAGGAAGGCGGCGGCCAAGAAGGATTGATGAACCCTCCCCCAATAAAAGATGGTTCCTaca