Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name GAR1
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name GAR1 ribonucleoprotein
Also known as NOLA1
Coordinate chr4:109815510-109824737
Strand +
Gene summary This gene is a member of the H/ACA snoRNPs (small nucleolar ribonucleoproteins) gene family. snoRNPs are involved in various aspects of rRNA processing and modification and have been classified into two families: C/D and H/ACA. The H/ACA snoRNPs also include the DKC1, NOLA2 and NOLA3 proteins. These four H/ACA snoRNP proteins localize to the dense fibrillar components of nucleoli and to coiled (Cajal) bodies in the nucleus. Both 18S rRNA production and rRNA pseudouridylation are impaired if any one of the four proteins is depleted. These four H/ACA snoRNP proteins are also components of the telomerase complex. The encoded protein of this gene contains two glycine- and arginine-rich domains and is related to Saccharomyces cerevisiae Gar1p. Two splice variants have been found for this gene. [provided by RefSeq, Jul 2008]

Retrocopy(s) from GAR1

Retroname Coord Strand Genomic Region ENSG
GAR1P1 chr4:184558892-184559822 - Intergenic
 ENSG00000249056 UCSC

Expression

Transcript Sequences

>NM_018983.4
GGGTGTGTGCGCAAGGCCAGGGCCAGAGGGGCACGTGGCGCCGGGAGGAGAGAGAATGTCTTTTCGAGGCGGAGGTCGTGGAGGCTTTAATCGAGGTGGTGGAGGTGGCGGCTTCAACCGAGGTGGCAGCAGCAACCACTTCCGAggtggaggcggcggtggaggcggcggCAATTTCAGAGGCGGCGGCAGGGGAGGATTTGGACGAGGGGGTGGCCGCGGAGGCTTTAACAAAGGCCAAGACCAAGGACCTCCAGAACGTGTAGTCTTATTAGGAGAGTTCCTGCATCCCTGTGAAGATGACATAGTTTGTAAATGTACCACAGATGAAAATAAGGTGCCTTATTTCAATGCTCCTGTTTACTTAGAAAACAAAGAACAAATTGGAAAAGTGGATGAAATATTTGGACAACTCAGAGATTTTTATTTTTCAGTTAAGTTGTCAGAAAACATGAAGGCTTCATCCTTTAAAAAACTACAGAAGTTTTATATAGACCCATATAAGCTGCTGCCACTGCAGAGGTTTTTACCTCGACCTCCAGGTGAGAAAGGACCTCCAAgaggtggtggcaggggaggccgaggaggaggaagaggaggaggtggcagaggtggtggcagaggcgGTGGTTTTAGAGGTGGAAGAGGAGGTGGAGGTGGGGGCTTCAGAGGAGGAAGAGGTGGTGGTTTCAGAGGGAGAGGACATTAAGTGAAACAGTTGACAGACATCACCAGTTGACTTCTGCATTAACCTGCATGATCTGTTTCTACTATGGATTGGAAACTTGTTTCTTGAACAAGTCTTGAAGATCTTGGTCATTTTATGACAATGGATCTAAAATGTCAGCATCATGCAAAGTGCAACGGAATAGTGAATTTTgctctaaaagagcatgaacaagtctttctaatgttttgtacagtgcctggcactctgtgggtgctcaataaatgGATAGGAGTTTTCATTTGAAGCATATTTGAATTTTTAAAATAAAGTGTTTTATTCCCTTAA