Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Crxos
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name cone-rod homeobox, opposite strand
Also known as Crxos1|Egam1
Coordinate chr7:15630049-15637955
Strand +
Gene summary Predicted to enable transcription cis-regulatory region binding activity. Acts upstream of or within blastocyst hatching. Predicted to be active in nucleus. Is expressed in central nervous system; early conceptus; and retina. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Crxos

Retroname Coord Strand Genomic Region ENSG
CrxosP7 chr14:45367500-45367938 + Intergenic
ENSMUSG00000115054 UCSC
CrxosP2 chr4:71692021-71692460 + Intergenic
N/A UCSC
CrxosP5 chr11:85154043-85154384 - Intragenic
N/A UCSC
CrxosP14 chr18:38843452-38843870 + Intragenic
Intragenic
N/A UCSC
CrxosP8 chr14:94742791-94743154 - Intergenic
ENSMUSG00000115059 UCSC
CrxosP9 chr14:99528555-99529106 - Intergenic
ENSMUSG00000100172 UCSC
CrxosP1 chr2:89978762-89979316 + Intragenic
ENSMUSG00000091703 UCSC
CrxosP6 chr14:118504632-118505184 + Intergenic
ENSMUSG00000092109 UCSC
CrxosP3 chr9:72379368-72379784 - Intragenic
N/A UCSC
CrxosP12 chr17:20010868-20011415 + Intragenic
N/A UCSC
CrxosP15 chr19:29809373-29809513 - Intergenic
N/A UCSC
CrxosP10 chr15:12031043-12032122 - Intergenic
ENSMUSG00000107344 UCSC
CrxosP4 chr9:87009082-87011172 + Intergenic
ENSMUSG00000099539 UCSC
CrxosP16 chrX:104208000-104209002 - Intragenic
ENSMUSG00000083889 UCSC
CrxosP11 chr16:29600769-29601362 - Intragenic
N/A UCSC
CrxosP13 chr17:6268345-6269080 - Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001033638.2
GGCTACAGGTTGGAGGGTCCCTGCTCAGTGCGCCCAACTTGAAGCTCAGTTTGAATCCTAAATCCTTAGAGCATACCTTCAATCACAACTGAAGTGAGCTACAGGCGAAATGGAAGCATCTCCACGTTCCCTGACCTCCTGTACCCTGGGTCCCCTTGACCAGAAGTTCAGTTGGGAGCAGCTTTCAGAGCTGGAAGCATACTTCAAGGTGGAACCATACCCAGACCTCCAGGATCGAAAGATCATGGCCACCAGACTGAAACTGAAAGAGGAACAAGTTGAGGCTTGGTTCATCCAGAGATCCTTGGAGGAGGAGATGCGGCCCCCCTTGGCCAGGCTGCAGCAGTCTGCCCTGGATGGTACCTCTTCTCCTTCCCACAAAGCCCTGTGCTGCAGGCCACCAAGCTGGAAGTACAGGCTCATTCCCATCAATCCCCCTGAGTCCTCGACCAGCTgCTTAAAGGATAGCAAAACTGTATTAATTTCAAAGACGGAGTTGACCGATGAGCAGTTCCAGAAGCTAAGAAAGCACTTCGAGACAGACCGTTGCCCTAATGAGGAAACTCTGCAGGCCTTCGCTGAGGAACTCAAACTACGGAAAGACCTCATCAGATCCTGGTTCATCACTCAGCGTCACAGAATGAGGGGGTACAGACGGTTATTTATGCGCTACTACAGGGATTGGAAAACGTCCCGTGAGTACTCTACAACAAGAAGTTTCGACAGGCAGAAGAACTCCAAGGAGTGCTCTCAGAATGACCCTGGACTCCCCGAAGCATTGGAAGCCTTGAAGAGGCTCAAGCTCTCTTCTGGGTACCAAAGCAGAGATGGCATGTCACAAGATTTCTGACTTTTCAACTTCTTGGTGGGGGCAGGCGTCTGTCTATGGGAGAAGGTACATTAATAATAAAGCGTGCATTCATAGAGTCGAAAATGactgcttt
>NM_001145190.2
AGTCCTAGAGAAGAGCCTCAAACTGAAGGAGGGAACTCAAGTGGGCAGCAGCCTCGTGATGGAAGAAATCGACGGGATGATAGTTCAAATGCgCTTAAAGGATAGCAAAACTGTATTAATTTCAAAGACGGAGTTGACCGATGAGCAGTTCCAGAAGCTAAGAAAGCACTTCGAGACAGACCGTTGCCCTAATGAGGAAACTCTGCAGGCCTTCGCTGAGGAACTCAAACTACGGAAAGACCTCATCAGATCCTGGTTCATCACTCAGCGTCACAGAATGAGGGGGTACAGACGGTTATTTATGCGCTACTACAGGGATTGGAAAACGTCCCGTGAGTACTCTACAACAAGAAGTTTCGACAGGCAGAAGAACTCCAAGGAGTGCTCTCAGAATGACCCTGGACTCCCCGAAGCATTGGAAGCCTTGAAGAGGCTCAAGCTCTCTTCTGGGTACCAAAGCAGAGATGGCATGTCACAAGATTTCTGACTTTTCAACTTCTTGGTGGGGGCAGGCGTCTGTCTATGGGAGAAGGTACATTAATAATAAAGCGTGCATTCATAGAGTCGAAAATGactgcttt
>NM_001205274.1
GGCTACAGGTTGGAGGGTCCCTGCTCAGTGCGCCCAACTTGAAGCTCAGTTTGAATCCTAAATCCTTAGAGCATACCTTCAATCACAACTGAAGTGAGCTACAGGCGAAATGGAAGCATCTCCACGTTCCCTGACCTCCTGTACCCTGGGTCCCCTTGACCAGAAGTTCAGTTGGGAGCAGCTTTCAGAGCTGGAAGCATACTTCAAGGTGGAACCATACCCAGACCTCCAGGATCGAAAGATCATGGCCACCAGACTGAAACTGAAAGAGGAACAAGTTGAGGCTTGGTTCATCCAGAGATCCTTGGAGGAGGAGATGCGGCCCCCCTTGGCCAGGCTGCAGCAGTCTGCCCTGGATGGTACCTCTTCTCCTTCCCACAAAGCCCTGTGCTGCAGGCCACCAAGCTGGAAGTACAGGCTCATTCCCATCAATCCCCCTGAGTCCTCGACCAGCTGTAAGCACAGTTGCTGATCCTCCTTCCCCATGGGCCACTCCAACATGTACCACAAAAACTGTTTCCCCAATTCCCCACCCCCTATCACAGGCCTGGCTGCACCAAACTCATCAAATGGTGGATGCCTCCCAGAACCCTCAGGGTCAATGTTTGAATACCTGGGTGCCAGGACAGATGACATTGGACAGAAATGGTGCAGAAATGGTGTTGAGTCTCCACCTAGGGCCTCCACTTGAATGTCCAGGGCCAAACCCCACTGCTGTGGTTCCACTTCTTTTAACAGCCTCCCCTCAAAAGTGGCCTCTCCTTCAGGATAGCTATCAACTCAATGTGCAGCACAGTATCACACTGACTTCTTGCCTCCTTTCCCAAGGCATGGTTACAGGCTGACATATACTGCCAGAACAACCACTTCCCAAGAGATTGACTGGCTAACAAGGCTGGATTTTTATTCCCTCTGACCTTGATCACTCATCTTGTACCAATGAGTAACTTATTGGTTTGTGTGTGATtggattgtattttttttttggtctattgGTGTTTCTGAGGCACCTGCTTGGGGATTTAGATCTTGGAGTGGCTCATTGATAACATGAAATTGTTGACaaattggttttttaaaaaagcttgtGTTGTTTTCACAAAAAAATACTTTGTGTGGAAGCTGGCTGTTGTATAGAAGTCAGGACAAAGGACAGCATAGGATTAGGGtctcctggtgctggagtggagcTTAGCTCTTCAGGCTTCCTGCCAAAGGTCTTTCATCACAGTCGCCTCAATAGCTAGGTTTCTTATTTGTGCGTGATGCTCTTTGAGGTAAAAGTTTCACTGTGATACTTCTAGCTGGCCTGGACTTTGCACCATTAACCTTGAATCTGAATTAACTCCAGATGTGCCTAGCTCTGCCTCAAAGTGCTGGTATATAAGGCTCATACCACCACTGTGCTATCCCTGATCCCAAAGTCTTTAAGCTTAGACTTGAAGTTGAGGAAACTCCCTCCCGAGAGTTTGATTAACACCTGGACATAATGGAAAATCAGGaatttattgtatatgtatggACTACACTAGTGAGACCGGTTACAGCAGGACTAGAAGCCTCTGCATGGACCATCCCTGCctatggagatcaggctggccttgaactcacagaactctgcctgcctttgcctcttgagtaATGGAAGTGAAGGTCTGCTCCGACATGCGCAGGCTGCAGATGACATTCCTTGGGTTTGGTGGAAGTTACTGTTGTGATCATACTTTAGAAAAGGTGAAGGATTTATATTGTTATAGGTATGGCTACACTGCGGCCCTGGACAGCCCAGGATGACTTTGCTTTAACCACACACGGTCTCCAAATGCTAACAAAGCAACCtcattgtttgggttttgttattAAAACAGGGTCTCTAAGTAACACTGGCTGCTCTAGAATGCTctatgcagaccaggttggccctcaaatctcagagatccacctgtcttctTCCCACCACACCCCCAGTGCTCTCatcaaaggcatgggccacctgACTTGGTTCCCTGTAGAATCCTCCAAACAGACAAGGGTGACATGGAAATTTATATTCCTGATAACTTCAGTTCCTGAGACAGGGATTGATGTTGTCAATTCAGTCAGGTGATGTTTCAATAAATTATTCAATGTCTATAAAT