Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Pqbp1
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name polyglutamine binding protein 1
Also known as PQBP-1|Sfc2|npw38
Coordinate chrX:7760758-7765508
Strand -
Gene summary Predicted to enable double-stranded DNA binding activity; protein C-terminus binding activity; and ribonucleoprotein complex binding activity. Involved in alternative mRNA splicing, via spliceosome and neuron projection development. Acts upstream of or within regulation of dendrite morphogenesis. Located in cytoplasmic stress granule; neuronal ribonucleoprotein granule; and nuclear speck. Is expressed in several structures, including 1st branchial arch maxillary component; adrenal cortex; central nervous system; eye; and limb. Used to study Renpenning syndrome. Human ortholog(s) of this gene implicated in Renpenning syndrome. Orthologous to human PQBP1 (polyglutamine binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pqbp1

Retroname Coord Strand Genomic Region ENSG
Pqbp1P1 chr12:97629687-97630526 + Intergenic
 ENSMUSG00000112584 UCSC

Expression

Transcript Sequences

>NM_019478.4
GAGGAACGTTGGGTGATCCCATTTCTGGGTTGCGGGTGTGTGGCACTTGGTCCCTTGGGTGATGGGTGGAGCCTTGGTCTAGAGAGGAACTGGGTCTTTGGTCCATCCGGTCTCCAGTGCCTGGGTCCGGAGAGTTCTGCTGATCCTAATTCTGGCCATATTGCTACATATCTCTTTTATCTTTTAGCacgcatttttgttctcttccaGCTACTGTTGCAGTTacgtagGTCTGGTCAGCTACCCACTATGCCGCTTCCTGTTGCGCTGCAGACCCGCTTGGCGAAGAGGGGCATCCTCAAACATCTGGAGCCGGAGCCAGAGGAAGAGATTATTGCTGAAGACTACGATGATGATCCTGTTGACTATGAGGCCACCCGGATAGAGGGTCTGCCACCGAGCTGGTACAAGGTGTTTGACCCTTCTTGCGGACTCCCTTACTATTGGAATGTGGAGACAGACCTTGTGTCGTGGCTCTCACCACATGATCCTAACTTTGTCGTTACCAAATCCGCCAAGAAAGTCAGGAACAATAATGCAGATGCTGAGGACAAGTCGGACCGGAATCTTGAAAAGGTGGACAGAAATCATGAGAAGTCAGATCGTAGTCATGAGAAGCCAGACAGGAGCCACGAGAAGGCAGACCGAAACCACGAGAAGAATGACAGAGAACGAGAGCGCAACTACGACAAagtggatagagagagagatcggGACAGGGAACGAGAGCGGGCATTTGACAAGGCAGACCGGGAAGAGGGCAAAGACCGACGCCACCATCGCAGAGAGGAACTGGCTCCTTACCCCAAGAACAAGAAAGCGACGAGCCGCAAAGATGAAGAATTAGACCCCATGGACCCCAGCTCATACTCAGATGCACCCCGGGGCACATGGTCAACAGGACTCCCCAAGAGGAACGAGGCCAAGACAGGTGCTGACACCACGGCAGCTGGGCCCCTCTTCCAGCAGCGCCCTTACCCTTCCCCGGGCGCTGTGCTCCGCGCCAATGCAGAAGCCTCCCGAACCAAACAGCAGGACTGACTGACCCCTTGTTCCCTGTAGCTTTGGCAGTTTGCgtttctgtgtttcttccttgTGGCTCTGGGACAGGAGCCATGGCTTCTATGTGCTGCATTATTATTCCACCAGTGAGCTACACTCCCGGCCCCTTTAGTGTTGTTTGTAAACAACAAGCCCTTGTTGTTTAATAAAAGCTTTTTTTGTGGAACATAT