Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name PTCD3
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name pentatricopeptide repeat domain 3
Also known as COXPD51|MRP-S39
Coordinate chr2:86106235-86142157
Strand +
Gene summary Enables rRNA binding activity and ribosomal small subunit binding activity. Involved in mitochondrial translation. Located in several cellular components, including cytosol; mitochondrion; and nucleoplasm. Implicated in combined oxidative phosphorylation deficiency 51. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from PTCD3

Retroname Coord Strand Genomic Region ENSG
PTCD3P1 chr19:57175217-57178888 + Intergenic
 ENSG00000268379 UCSC

Expression

Transcript Sequences

>NM_017952.6
AGAGAAATCAAAGATGGCGGTTGTATCTGCTGTTCGCTGGCTGGGCCTCCGCAGCAGGCTTGGCCAGCCGCTGACGGGTCGGCGGGCGGGTTTGTGTGAACAGGCACGCAGCTGCAGATTTTATTCTGGTAGTGCAACCCTCTCAAAGGTTGAAGGAACTGATGTAACAGGGATTGAAGAAGTAGTAATTCCAAAAAAGAAAACTTGGGATAAAGTAGCCGTTCTTCAGGCACTTGCATCCACAGTAAACAGGGATACCACAGCTGTGCCTTATGTGTTTCAAGATGATCCTTACCTTATGCCAGCATCATCTTTGGAATCTCGTTCATTTTTACTGGCAAAGAAATCCGGGGAGAATGTGGCCAAGTTTATTATTAATTCATACCCCAAATATTTTCAGAAGGACATAGCTGAACCTCATATACCGTGTTTAATGCCTGAGTACTTTGAACCTCAGATCAAAGACATAAGTGAAGCCGCCCTGAAGGAACGAATTGAGCTCAGAAAAGTCAAAGCCTCTGTGGACATGTTTGATCAGCTTTTGCAAGCAGGAACCACTGTGTCTCTTGAAACAACAAATAGTCTCTTGGATTTATTGTGTTACTATGGTGACCAGGAGCCCTCAACTGATTACCATTTTCAACAAACTGGACAGTCAGAAGCATTGGAAGAGGAAAATGATGAGACATCTAGGAGGAAAGCTGGTCATCAGTTTGGAGTTACATGGCGAGCAAAAAACAACGCTGAGAGAATCTTTTCTCTAATGCCAGAGAAAAATGAACATTCCTATTGCACAATGATCCGAGGAATGGTGAAGCACCGAGCTTATGAGCAGGCATTAAACTTGTACACTGAGTTACTAAACAACAGACTCCATGCTGATGTATACACATTTAATGCATTGATTGAAGCAACAGTATGTGCGATAAATGAGAAATTTGAGGAAAAATGGAGTAAAATACTGGAGCTGCTAAGACACATGGTTGCACAGAAGGTGAAACCAAATCTTCAGACTTTTAATACCATTCTGAAATGTCTCCGAAGATTTCATGTGTTTGCAAGATCGCCAGCCTTACAGGTTTTACGTGAAATGAAAGCCATTGGAATAGAACCCTCGCTTGCAACATATCACCATATTATTCGCCTGTTTGATCAACCTGGAGACCCTTTAAAGAGATCATCCTTCATCATTTATGATATAATGAATGAATTAATGGGAAAGAGATTTTCTCCAAAGGACCCGGATGATGATAAGTTTTTTCAGTCAGCCATGAGCATATGCTCATCTCTCAGAGATCTAGAACTTGCCTACCAAGTACATGGCCTTTTAAAAACCGGAGACAACTGGAAATTCATTGGACCTGATCAACATCGTAATTTCTATTATTCCAAGTTCTTCGATTTGATTTGTCTAATGGAACAAATTGATGTTACCTTGAAGTGGTATGAGGACCTGATACCTTCAGCCTACTTTCCCCACTCCCAAACAATGATACATCTTCTCCAAGCATTGGATGTGGCCAATCGGCTAGAAGTGATTCCTAAAATTTGGAAAGATAGTAAAGAATATGGTCATACTTTCCGCAGTGACCTGAGAGAAGAGATCCTGATGCTCATGGCAAGGGACAAGCACCCACCAGAGCTTCAGGTGGCATTTGCTGACTGTGCTGCTGATATCAAATCTGCGTATGAAAGCCAACCCATCAGACAGACTGCTCAGGATTGGCCAGCCACCTCTCTCAACTGTATAGCTATCCTCTTTTTAAGGGCTGGGAGAACTCAGGAAGCCTGGAAAATGTTGGGGCTTTTCAGGAAGCATAATAAGATTCCTAGAAGTGAGTTGCTGAATGAGCTTATGGACAGTGCAAAAGTGTCTAACAGCCCTTCCCAGGCCATTGAAGTAGTAGAGCTGGCAAGTGCCTTCAGCTTACCTATTTGTGAGGGCCTCACCCAGAGAGTAATGAGTGATTTTGCAATCAACCAGGAACAAAAGGAAGCCCTAAGTAATCTAACTGCATTGACcagtgacagtgatactgacagcagcagtgacagcgacaGTGACACCAGTGAAGGCAAATGAAAGTGGAGATTCAGGAGCAGCAATGGGTCTCACCATAGCTGCTGGAATCACACCTGAGAACTGAGATATACCAATATTTAACATTGTTACAAAGAAGAAAAGATACAGATTTGGTGAATTTGTTACTGTGAGGTACAGTCAGTACACAGCTGACTTATGTAGATTTAAGCTGCTAATATGCTACTTAACCATCTATTAATGCACCATTAAAGGCTTAGCATTTAAGTAGCAACATTGCGGTTTTCAGACACATGGTGAGGTCCATGGCTCTTGTCATCAGGATAAGCCTGCACACCTAGAGTGTCGGTGAGCTGACCTCACGATGCTGTCCTCGTGCGATTGCCCTCTCCTGCTGCTGGACTTCTGCCTTTGTTGGCCTGATGTGCTGCTGTGATGCTGGTCCTTCATCTTAGGTGTTCATGCAGTTCTAACACAGTTGGGGTTGGGTCAATAGTTTCCCAATTTCAGGATATTTCGATGTCAGAAATAACGCATCTTAGGAATGACTAAACAAGATAATGGCAGTTTAGGCTGCACAACTGGTAAAATGACTGTAGATAAATGTTGTAATTAGTGTACACGTTTGTATTTTTGTTAATATAGCCGCTGCCATAGTTTTCTAACTTGAACAGCCATGAATGTTTCATGTCTCCCTTTTTTTTTGTCTATAGCTGTTACCTATTTTAGTGGTTGAAATGAGAGCTAGTGATGACAGAAGGATGTGGAATGTCTTCTTGACATCATTGTGTATTGCTGGTAATCAAGTTGGTAACGACTACTTCTAGCAGCTCTTACCACTATGACTTAAGTGGTCCTGGAAGGCAGTAAGTGGAGGTTTGCAGCATTCCTGCCTTCATGAGGGCTTCTACCACTGACCACTTTGCACGTACCTGGCTCCCAGATTTACTTAGGTACCCCACGAGTTGTCCACATAAGCAGCTTCATCTTTACCTTGCCAGAGTTGACAATTATGGGATACTCTAGTCTACTTATACTTGTGTTCCCATCTGTCTGCCATCCTCTGAAGGCCGGGACCCAGTCATACATCCTTAGAAACCAAAGTATGGTTTTTGTTTTCTCTTGGAATGTCAGGTCTTAAGGCATTTAATTGAGGGACAAAAAAAAAAAAAGCCGATATAGTAGCTAGCTACTTAAGCATCCATGGGTATTGCTCCATATCAAAGCAGATTTGCAGGACAGAGAGAGTAAATTAGCCTTCAGTCTTGGTTTACAGCTTCCAAGGAGAGCCTTGGCCACCTGAAATGTTAACTCGGTCCCTTCCTGTCTCTAGTTCATCAGCACCTGCAGATGCCTGACTCTTGTTAGCCTTACTATTCAATACAGTCCTTAGATTCACGGTATGCCTCTTCCTATCCAGGCACCTATTCTGAATCACCATGTTGCTCTGCAGCTAGAGTTGATAGGAGAAAATCCATTTGGGTAGATGGCCTATGAATTTGTAGTAGACTTTCAAAATGAGTGATTTGTTAGCTTGGTACTTTTAAGTTTGTGGTACAGATCCTCCAAACCCATACTCTGAGCAATTAACTGCCTTGAACATAGAGAAAAATTAAGGCCTCACAGGATGAGTCTCCATTCTCTGTAAATGCTTATTTTATCATAGTCTTTAGCCTCTACTATGAGTAAAATGTTCTCTTCggccgggtgtggtgactcacacctgtaacctcagcactttgggaggcagaggtgggaggatcacttaggtccaggagttcgagactagcctgggcaacatagtgagacaccggatctacaaaaaaataaaaagccagactggtggtatgtatctgtgtcccagctaattgggagggtgagttgggaggattgtttgagcctaggagagggaggttgcagtgagccgtgattgcaccactgcactccagcctgggcaacagagcaagaccctgtctTGGAGAAACCAGAATTTTGGAAGAGCAAATGGggctgagtgcagtggctcatgcctgtaatcccagcacttagggtgccaatgtggattacctgagcccaggagtttgagaccagcctgggtaacagtgagacccccctccctacaaaagattttaataattagttgggcgtagtggtgcatgcctgtaatcccagctactctggagacaggtggaggggattgcttgagcctgggaagctgaggctgcagtagccatgactgcaccactgcattccagcctggttgacagagtgacccttgtctccaagaaaaaaaaaaaGCAAATGGGATTAAGGACTCATGGAATGGGAAGGGGAAGGGGAGTCTTACTATATGTGGAATAAACTTGCTCAGTGTTGCCACAGAGTTACATTACCAATGTGTAGAAGTCAGAAACTAGACTTCTAGTTTGGTTCAACATTTGAGGGTTGTTTTATAGCCATCAAAGTATTCAAGAGGTTGGATGGCACTCAAAAGATTCTACATGTCTAGAATCAAACTCAAATCTGGCACGTAGGTGCTTCTTAGTAAATGCTTAATGAATGCCACCAACTCTGCAAAGTATTCATTGATTTTGAGACCTTAGTCATGTTGCTACTAAAAGTAGGGCATATGACCGCCTAAGAAACAGAACTTCGAGAAGTCCTAACGTAACCACAGTAAAGCAGACTCCCCTTTCAGCAACCTCAAAGCaaaaaaaaaaaaaaaaaaaCCAGTTAGCTGCTATATAAACACTATACCAAGCACTAGGCTTAGAGGAAAAGATGTCAGATTGTACTGTCACTGGCTATGTACCCATATTCTCTAAGACAGGGTAGCATTTGTCTTTCAAACTGCAGGGTTTGAAATCAGTTTTTGTGGGTGATTGCAATTTTTTAATGAAATGCATTAGAACATCTAAGCACGTCACCTACAGTTTTGTGATGGTGCATTTTTGCATTGCAGTATAGAtctgtgcatagatatatgcattaagtgtagcaaatcgtgatgtaaattttttactgctggtcatggtcaaaaaGTAAGATACGCTAGGAAATTGAGTCACTAGGAGCATGGATGTATAAGGCAGGTTTTATACAACCATTTAGATTCAACATTAATGGTAGAGTGGCATTTTACCAAAAAAATGGGTGTATTTGATTTGGGTGCTGTAAGGCAATTTGCTAGGACATGGGATAATCAGATTACACAAAATCTAGGCAGTGAACAAGTCTTCATCCTGGCCCAGGAAATAGCCTATTAAAAAATGCTGTCCAggccaggcacagtggctcacacctgtaatcccaggacttcgggaggctgaggctggaggattgcttgagttcaagaccagcctgagcaacacagtgaaaacccatctcaaaaaaaaaaaaaaaaaACCAAAAAAACTGTCCAGCTGTGGACTTTCAGGATTCAGGACTGCTGGGGATCAAGCCCAAGGATGTTTTTCAGAGCTCTGTGATTTAAGATGCTCGAAAAGAGTGTCCAAGAGGAGTAAAGGTCATGACAGAATTTACTCCCAGGACAATCTAAGTTCTGCCACAAGTACCCGTGGTGTCTGTTCCCACAACAATGGCCCTTTCACAAGCTCTTGCCTCACAACCCCTGCAGAAGTCCTTCAACAAAACTAATAATAGACTAGTGAAACCTACTCCTCACATGGGTAAGAGTTGCAGTGGGCAGGTGACCCTCCTCCCTGCCCCCATCCTTTGCTTCCTCAAGCTCCCTGCCAACCTCTGGATACATCAATGGGAAGGAAACCAGGGAAGCATAGACCTATAGTACAACAGGGGTGTAGTGACCACTGGACCTGATGAAGCGAATCTGCCTGAAATTTAATACGCCTTTTTATTTCCCTTCTGTGTTAAATCAAATGATCTGTTCTGCACTGAGCCAAGCAAGTTACTTTTAAAACTGGTGGCACCACTCATTTGGGACTTGGAGACTGCTTTTATCCAGAACCTGTTAAGAGAACAGGGGATTTAAATACAAAGGAATATGAAGGTGGTGTGCCTTAAAGACAGTCTAAAATTAGGTTTTAGTTTGTTACATTATTTTGAAATATTAAACATGAAAATGTTAAATCAGGATGTGTGAGTTTTAAGATGTTGAACACTGTCCTACATCAGTGAGGAGGGAGGCAATAAAGTAATTTCAGAGTAAAACAGATTGAGGATGAAACCAAGACAGAAGTGATGATTTGGCTTTTTATGATTTTTGCTGTGGAAATGGCAGTCGTGTGACTTTTCACTTGCAGTTTAAATGAAAGGGTGAAGAGAAGCCTACCTGCCCTAATGGCTCAGGGCTATATCCACCTCCCGGATAACCCTGGCCCTTGGGACTCCATCATCTCCTTGAAGTAGCACTGAGAATCCAAGAAGAGGCTCCGCTGCTTTTTGCACATGTTACTGAGTTACATCTCAGGAAGATTTTTAAGCACGAGGAAGGAAAATACAGGCCTGGCCAAGCAGGGTCCCCTTTTCGGTATCATCTTTGTTCCTAATAAGCAATCAAGGGGGGTGGGTGTGTTGGCTGGTAAAGGAACTACTAAGATTCAGAAGCTTGTAGTCTTCATTATTTTGTTTTACAGGTTAAAATAAACCACTTgactggg