Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name ZNF444
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name zinc finger protein 444
Also known as EZF-2|EZF2|ZSCAN17
Coordinate chr19:56132509-56160893
Strand +
Gene summary This gene encodes a zinc finger protein which activates transcription of a scavenger receptor gene involved in the degradation of acetylated low density lipoprotein (Ac-LDL) (PMID: 11978792). This gene is located in a cluster of zinc finger genes on chromosome 19 at q13.4. A pseudogene of this gene is located on chromosome 15. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2011]

Retrocopy(s) from ZNF444

Retroname Coord Strand Genomic Region ENSG
ZNF444P1 chr15:58864621-58865303 + Intergenic
 ENSG00000259738 UCSC

Expression

Transcript Sequences

>XM_005259034.2
AGTTCGGGGTGAGGCCGGGGCTTCATGGGGAGTTGTTGGGCTGAACGAGCGGCTCGGAGTATGGGATTGGGGGAGGGGGACGGGGGAGTTTGGCGCAAAGCCTGCTGGGGCATGGAGTCCCGGCGAGCTTTGTGCGCATGTGCGGGGAGGTGAGGGGGCTTGGGGGGCCTCGCCTGAGAGAGTGAGtcaacgaaatggagatacagggtattacaaaaggtgccttgtacctcgtccaaggacacagagctggtaggaggcagagctggaatttgccccagagcctttgtgccgtagGACAGGCTGCGGGAGGAGCTGCAGGACTGAGGTACAGAGGCCAGGGGCCCAGGGCAGGACCCAGCCTGGACTTGACTCCCTGGGATCCCAGGAAGGGCACACCCTTTCCTCACCACCCGAGTGAGCGCTGCCCCCTCACAGAGACCTCTTTGccccctgggccaggcagagcagGCGCTGCGGTCCGGGAGGCCCCATGGAGGTGGCGGTGCCCGTGAAGCAGGAGGCCGAGGGCCTGGCGCTGGACTCCCCGTGGCACCGCTTCCGCCGCTTCCACCTGGGCGACGCGCCGGGCCCGCGGGAGGCGCTGGGGCTGCTCCGCGCCCTGTGCCGGGACTGGCTGCGGCCCGAGGTGCACACCAAGGAGCAGATGTTGGAGCTGCTGGTGCTGGAACAGTTCCTGAGCGCGCTGCCCGCCGACACGCAGGCCTGGGTGTGCAGCCGGCAGCCGCAGAGCGGGGAGGAGGCGGTGGCCCTGCTGGAGGAGCTCTGGGGGCCAGCAGCCTCCCCCGATGGGTCGTCAGCAACGAGGGTGCCTCAGGATGTGACGCAGGGCCCTGGGGCCACAGGTGGAAAGGAGGACAGTGGGATGATTCCCTTAGCAGGCACCGCCCCTGGGGCTGAGGGGCCGGCGCCTGGGGACTCCCAGGCTGTGCGCCCCTACAAGCAGGAGCCCAGCAGCCCCCCGCTGGCGCCTGGCCTGCCCGCCTTCCTAGCGGCCCCGGGCACCACGTCCTGCCCCGAGTGCGGCAAAACGTCCCTGAAACCAGCTCACCTGCTGCGCCACCGGCAGAGCCACTCGGGCGAGAAGCCGCACGCCTGCCCTGAGTGCGGGAAGGCCTTTCGGCGCAAGGAGCACCTGCGGCGCCACCGCGACACGCACCCCGGCAGCCCCGGCAGCCCCGGGCCCGCGCTGCGCCCTCTGCCCGCCCGTGAGAAGCCCCACGCGTGCTGCGAGTGTGGCAAGACCTTCTACTGGCGCGAGCACCTGGTGCGCCACCGCAAGACGCACTCGGGAGCGCGGCCCTTTGCCTGCTGGGAGTGTGGCAAGGGCTTCGGGCGCCGCGAGCACGTGCTGCGCCACCAGCGCATCCACGGCCGGGCAGCGGCCAGCGCGCAGGGGGCGGTAGCTCCGGGCCCGGATGGTGGAGGCCCCTTCCCGCCCTGGCCCTTGGGTTAGCCGCCTCCCGGCCAGCGCCATCTCCCGCCCTTGGTGCTGCCCCCGGGCGGTACCTGCTCTCTCCCAGCGCCACTTGGcctcttcctctcctccttccctcccatcgtcctcctccacctgcgcctccCTTGTCTGAACTTCCCAACGCCTTCCTATTCCTTTCCAACTCCTTTTCCCCCAAATTTCACTTTCCTTCTCAGGTCTCACCTCAGCCCCCCCCTTCTCCCTGATTTCTCGGCCTCTCTCTCTGTGTGAAGGGGCCTCTCCCTAATGTCTcctccttcccccctcttctctctcctgcggcccagcctccctctccctcctccattcctctctccctgccctTTTCCTGCCTGAAGAGCAGAGGTGAGGACCTGGGACCCCTGAGGGGCAGGCCAGGAGGAGCTCGGGCGCAGGCCAGGCCCCCTTGGTGAAGCAGAGGCTGAAGGAAAGGGGTCTGGGTCTTGTCCCTAGGAATTCTCCTCCCTCAGGAGATTGGGGGTTGGGGGAGGCAGCGGGTGATGGCTCTGAAGCTGAACCCAGGGCCTGGCTGTGGTCTTCTTGGTCTTGCTGCCCCCTGTGACCCAAAGGCATGGGATGGACAGAGATGCCTGCCCCCGTGAAGCTGGTTGGGGAGGGCAGTTCACCAGCATCCATAGAGTAATAAAGTCACTGTGTGTAGACCCGGA