Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name LIMS2
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name LIM zinc finger domain containing 2
Also known as LGMD2W|MDRCMTT|PINCH-2|PINCH2
Coordinate chr2:127638421-127681786
Strand -
Gene summary This gene encodes a member of a small family of focal adhesion proteins which interacts with ILK (integrin-linked kinase), a protein which effects protein-protein interactions with the extraceullar matrix. The encoded protein has five LIM domains, each domain forming two zinc fingers, which permit interactions which regulate cell shape and migration. A pseudogene of this gene is located on chromosome 4. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2011]

Retrocopy(s) from LIMS2

Retroname Coord Strand Genomic Region ENSG
LIMS2P1 chr4:36065162-36065660 - Intergenic
ENSG00000248466 UCSC

Expression

Transcript Sequences

>NM_001161403.3
GAGGTGGCGAGCAGAGCCCGGGTTGGGAAGGACTTGACCCGCGCCCGCCGCTGGCCGCGCTCCGTGTCCCTGGAGCTGGGGCTGTGCGGGAGCGGGGcccaccctctacctttacccctacttttacccccactcccacccccgcctcactctcacccctccaaccccaccgtcagccccacctttaacccccacccctccaaccctacccgccgccacccccacctgccacccccacccccacctatactcccgcaacctcccaccgtcacctccccaacacccccaccaccctcagccttgacctccccatcccaccccgccccgcgggccccaccctgccacccccgcccACCCCTCTCGCGGGCGGAGCGGCTCTTGGCCTTTTTTGGGCGTCTCCCTGCTCCGCGGCCcgggctggcgggcgggcgctcggctggcggCTGCAGCAGCAGAGGGAGACCCGCGGCAACCCCGGCAACCCAGGGCTCGGCGTCGCTGCCACCATGACGGGAAGCAATATGTCGGACGCCTTGGCCAACGCCGTGTGCCAGCGCTGCCAGGCCCGCTTCTCCCCCGCCGAGCGCATTGTCAACAGCAATGGGGAGCTGTACCATGAGCACTGCTTCGTGTGTGCCCAGTGCTTCCGGCCCTTCCCCGAGGGGCTCTTCTATGAGTTTGAAGGCCGGAAGTACTGCGAACACGACTTCCAAATGCTGTTTGCTCCGTGCTGTGGATCCTGCGGTGAGTTCATCATTGGCCGCGTCATCAAGGCCATGAACAACAACTGGCACCCGGGCTGCTTCCGCTGCGAGCTGTGTGATGTGGAGCTGGCTGACCTGGGCTTTGTGAAGAATGCCGGCAGGCATCTCTGCCGGCCTTGCCACAACCGTGAGAAGGCCAAGGGCCTGGGCAAGTACATCTGCCAGCGGTGCCACCTGGTCATCGACGAGCAGCCCCTCATGTTCAGGAGCGACGCCTACCACCCTGACCACTTCAACTGCACCCACTGTGGGAAGGAGCTGACAGCCGAGGCCCGCGAGCTGAAGGGTGAGCTCTACTGCCTGCCCTGCCATGACAAGATGGGCGTCCCCATCTGCGGGGCCTGCCGCCGGCCCATCGAGGGCCGAGTGGTCAACGCGCTGGGCAAGCAGTGGCACGTGGAGCACTTTGTCTGTGCCAAGTGTGAGAAGCCATTCCTGGGGCACCGGCACTATGAGAAGAAGGGCCTGGCCTACTGCGAGACTCACTACAACCAGCTCTTCGGGGACGTCTGCTACAACTGCAGCCATGTGATTGAAGGCGATGTGGTGTCGGCCCTCAACAAGGCCTGGTGTGTGAGCTGCTTCTCCTGCTCCACCTGCAACAGCAAGCTCACCCTGAAGAACAAGTTTGTGGAGTTCGACATGAAGCCCGTGTGTAAGAGGTGCTACGAGAAGTTCCCGCTGGAGCTGAAGAAGCGGCTGAAGAAGCTGTCGGAGCTGACCTCCCGCAAGGCCCAGCCCAAGGCCACAGACCTCAACTCTGCCTGAAGGCCCTCTTGCGCAGCTGCCTCTCGGCCCCTCCGCCTTCTCCCCTCCTGCTGTCCATGCTTGGCCCCCTCGTCCCCATCCACCTGTGCCCTCCGCATCTTACCCTCCCTTTCTCTTTCCTCATTGCCTTCTCCCTTCCTGTTCCCTCATCTCTGCCTTCCCCATGTCTCTCCTCTCCTTGGCCGTGGCTTCTGTCTGTGAGGAGGCAGGAGCTGGGGAGTGGGAGCCTATGACCCCACGTCTGACAGCCATGTCCACCTGTGCCCACAGCTTCCGCCCACAGACCTCCAGGGACAGGAGCAAATTGCACCACAGCTCCCCGCCTGGCCTGGCCCTCCCCAGGCGGCTCAGTGGCTCATGCTGTCCTGTGAGAGCCCCTGCCCCAGAGCGGCCCCACTAAGCGCATGTGGCTCCTGGGCTACCCACAGCCAGGGCAGCCTGCTGGAGCCACAGGGCCAGGGCCATGCAGATGGAGGCCTCTGGGAGCCACCTCCAATCCCTCACCACTCACTCAACCAGTGGCACAGTGTCCTTGTGCCCACACTGAGCCAGCAAGTCCTGCTGTCCACACCCACAAGCTACCTGGAGGGACAGGACCCACCTCCATCCTTCGGAAGGCCTTCCTGGAATCCCACCTTGGCCTCCGCCCTCGGTTCCGCCCCGCCCCTCTCCCCCCGACCTTGGGGCTTGTGTCGAGCCCTTGGGTGGGGCCAGGAGGAGGTGATGGCGTCAGAGGAGGTGTGGTCAGAGGTGACTTGTTCCCACCTCCAGGGAGGACGCTTCGTCTTCGGCCAGCGCAGACCTGGTGTTTGTTTGTTGGGCTCACGCTTGCACAATGAAGGCTTGTTCACACAA