Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rplp1
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein, large, P1
Also known as 2410042H16Rik|Arpp1|C430017H15Rik
Coordinate chr9:61820565-61821792
Strand -
Gene summary Predicted to enable protein kinase activator activity and ribonucleoprotein complex binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within regulation of translation. Predicted to be located in cytosolic ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPLP1 (ribosomal protein lateral stalk subunit P1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rplp1

Retroname Coord Strand Genomic Region ENSG
Rplp1P10 chr11:45927250-45927617 + Intergenic
ENSMUSG00000082870 UCSC
Rplp1P1 chr2:90861081-90861532 - Intergenic
ENSMUSG00000082108 UCSC
Rplp1P2 chr3:90946879-90947089 + Intergenic
ENSMUSG00000105919 UCSC
Rplp1P4 chr4:32964805-32965273 + Intergenic
ENSMUSG00000094344 UCSC
Rplp1P3 chr4:145196233-145196674 - Intergenic
ENSMUSG00000087076 UCSC
Rplp1P6 chr6:4390849-4391051 + Intergenic
ENSMUSG00000107450 UCSC
Rplp1P7 chr7:126885171-126885639 - Intergenic
ENSMUSG00000090460 UCSC
Rplp1P8 chr7:136769491-136769813 + Intergenic
ENSMUSG00000110174 UCSC
Rplp1P9 chr8:107299596-107300064 - Intragenic
ENSMUSG00000060019 UCSC
Rplp1P13 chrX:69696770-69697238 - Intragenic
ENSMUSG00000084185 UCSC
Rplp1P12 chr19:12824228-12824612 + Intergenic
ENSMUSG00000091014 UCSC
Rplp1P5 chr5:30425871-30426210 - Intergenic
N/A UCSC
Rplp1P11 chr17:45678789-45678940 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_018853.3
GTCCTTCCGAGGAAGCTAAGGCCGCGTTGGGGTGAGGCCCTCACTTCATCCGGCGACTAGCACCGTGCCGGCAGTCTACAGCATGGCTTCCGTCTCCGAGCTCGCTTGCATCTACTCCGCCCTCATCCTGCACGACGACGAGGTGACGGTCACGGAGGATAAGATCAATGCCCTCATTAAAGCAGCTGGTGTCAGCGTCGAACCTTTCTGGCCTGGCTTGTTTGCCAAGGCTCTGGCCAATGTCAACATTGGGAGCCTCATCTGCAATGTAGGGGCTGGTGGGCCCGCTCCAGCAGCTGGAGCTGCGCCTGCTGGTGGTGCTGCTCCATCCACTGCCGCCGCCCCAGCTGAGGAGAAGAAAGTGGAGGCAAAGAAGGAAGAGTCCGAGGAGTCTGAAGATGACATGGGCTTCGGTCTTTTTGACTAAACTGCTTTTGTTAAGTTGGCTAATAAAGAGCTGAACCTGTA