Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ddx21
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name DExD box helicase 21
Also known as D10Ertd645e|D10Wsu42e
Coordinate chr10:62416026-62438077
Strand -
Gene summary Enables double-stranded RNA binding activity and identical protein binding activity. Involved in positive regulation of I-kappaB kinase/NF-kappaB signaling and positive regulation of myeloid dendritic cell cytokine production. Acts upstream of or within response to exogenous dsRNA and response to virus. Located in cytosol. Is expressed in several structures, including 1st branchial arch; early conceptus; genitourinary system; and limb. Orthologous to human DDX21 (DExD-box helicase 21). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ddx21

Retroname Coord Strand Genomic Region ENSG
Ddx21P2 chr10:85562680-85564312 - Intergenic
ENSMUSG00000112451 UCSC
Ddx21P3 chr10:86386887-86388516 - Intergenic
ENSMUSG00000112893 UCSC
Ddx21P1 chr3:13494618-13495225 + Intergenic
ENSMUSG00000104065 UCSC

Expression

Transcript Sequences

>NM_019553.2
GAGGGGCGGTCCGCTTTCTCTGTCGCCCTCTCTCCTAGCACGCGGTTGAGGAAGCCGGTAGGCCTGAGAAGCTGCTGCTGAATAATGCCGGGAAAACTCCGCAGTGGGGCCAAGTTGGGCTCAGACGGGGCCGAGGAGAGCATGGAGACGCTGCCGAAGCCAAGCGAGAAGAAAACtagaaaagagaagacaaaatCAAAGACCGAAGAAGCAACAGAAGGAATGGAAGAGGCCGTTTCctccaaagcaaagaaaacaaacaagaaagggcCTTCTGAGGATGATGTGGATCCCCCTAAATCCAggaaggccaagaagcaggaggaggagcctcAAGACGACACTGCTTCTACAAGCAAAACCtccaagaagaaaaaggagccccTTGAGAAGCAAGCAGACTCTGAAACCAAAGAGATAATAACAGAGGAGCCTTCCGAAGAAGAGGCAGACATGCCTAAGCCCAAGAAgatgaagaaagggaaagaagcaaACGGAGATGCCGGAGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGCAGACATTCCTAAGCCCAAGAAgatgaagaaagggaaagaagcaaACGGAGATGCTGGAGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGTAGACATTCCTAAGCCCAAGAAgatgaagaaagggaaagaagcaaGCGGAGATGCGGGAGAGAAAAGCCCCAGGCTGAAGGATGGACTCTCCCAACCTTCTGAACCGAAATCCAACTCCAGTGATGCTCCTGGTGAGGAAAGTAGTAGCGAGACAGAAAagGAAATACCTGTGGAGCAGAAAGAGGGAGCTTTCTCTAATTTTCCCATTTCTGAAGAGACTGTCAAGCTTCTCAAAGCTCGTGGGGTGAACTTCCTGTTTCCTATACAAGCCAAGACCTTTCATCATGTGTACAGTGGGAAAGACTTAATTGCCCAGGCACGGACAGGAACCGGAAAGACATTCTCTTTTGCCATCCCTTTAATTGAGAAACTTCAAGGTGGGCtacaagagaggaagagaggccgAGCCCCTCAGGTGCTAGTCCTTGCACCCACAAGAGAATTAGCAAATCAAGTGAGCAAAGACTTCAGCGACATCACCAAAAAGCTCTCTGTAGCTTGTTTTTATGGTGGAACACCCTACGGTGGTCAGATTGAACGAATGCGGAGTGGGATTGATATCCTGGTTGGGACCCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAAGCTAGATCTCACCAAACTTAAACATGTTGTCCTGGATGAAGTCGACCAGATGTTGGATATGGGTTTTGCTGATCAAGTGGAAGAAATTTTATGTGTTGCATACAAGAAAGATTCTGAAGACAACCCCCAAACATTGCTTTTCTCTGCAACTTGCCCTCATTGGGTGTTTAATGTTGCTAAGAAATACATGAAATCTACATACGAACAGGTGGACCTGATTGGTAAAAAGACTCAGAAAGCAGCTATAACTGTGGAGcACCTGGCGATTAAGTGTCACTGGACAGAAAGGGCAGCGGTGATTGGGGATGTGATCCGAGTGTACAGTGGTCATCAAGGGCGCACGATCATCTTCTGTGAAACCAAGAAGGATGCCCAGGAGCTATCTCAGAACACGTGCATAAAGCAGGATGCCCAGTCCTTACATGGCGACATTCCACAGAAGCAAAGGGAAATCACCCTGAAAGGTTTCCGAAATGGCAATTTTGGAGTTTTGGTGGCAACCAATGTTGCTGCCCGTGGGTTAGACATCCCTGAGGTTGACTTGGTTGTTCAGAGCTGCCCACCAAAGGATGTGGAGTCTTACATTCATCGTTCGGGGCGGACAGGCAGAGCTGGAAGGACAGGAGTTTGCATCTGCTTTTACCAGAACAAAGAAGAGTACCAGTTAGCACAAGTGGAGCAGAAAGCGGGAATTAAATTTAAACGGATAGGTGTTCCTTCTGCAACGGAAATAATAAAAGCCTCCAGCAAAGACGCCATCAGGCTCTTGGATTCTGTGCCTCCCACTGCCATTAGCCATTTCAAGCAGTCAGCTGAGAAGCTGATTGAGGAGAAGGGAGCTGTAGAGGCCTTGGCAGCTGCTCTGGCCCACATCTCAGGAGCCACATCAGTCGATCAGCGCTCCCTGATCAACTCGCAAGCAGGCTTTGTGACCATGATCCTGCGGTGCTCCATTGAGATGCCCAACATCAGTTACGCTTGGAAAGAACTTAAGGAGCAGCTGGGCGAGAGCATCGATGCCAAAGTGAAGGGAATGGTCTTCCTCAAAGGAAAACTGGGGGTTTGTTTTGATGTCCGAACTGAAGCAGTCACAGAAATAcagGAGAAGTGGCATGATTCGAGACGCTGGCAGCTCACCGTGGCCACCGAGCAGCCAGAGCTGGAGGGACCTCCAGACGGATATCGAGGCCGCATGGGTCAGCGTGATGGCAGCCGTGGTGCTTTCAGAGGACAGcggggtggaagcaggaacttccGGGGACAGGGACAGCGAGGAGGAAGTAGAAACTTCCGAGGACAGCGACCAGGAGGTGGCAACAGAGGCCAGAAGCGGAGTTTTAGTAAAGCGTTTGGTCAGTGAGTAGAGGCCAGAAGGGACTGTTCCCACTGTGGACCCCAGGGTCCACCCTGCTGACAAAGCCCGAgtgcttccttcctttttttaccACTTCTCAGCGCCCCCTTTCTTGCAGAGAGGCTTCTGAACTGTCCACTAACCATCACAAATTCTTCATTTTGAAAAAGGATAAGAATTCATTGCATCGTTTTCCAACATACTTTTAGATTTACAAAGTAAAACCAACCATGGATCTGCCTATCTTGGTGTGTCGATCTTGTaattttatctttgtgtgtgtgtgtgtgtgtgtgtgtgcactcactggGGCCTAAGCTCAGAACCTCACACAGGCAGAGTATACACACGCCCTGCAACTAAACTGCATCTCTAGTCCCTATACATGTGTCCTACTCATCCTTCAAAGTGAGTCCCTAGGGGATGCCTCAGTCTCTGGAGGATTGCAAGAGCCAGGGCGGAATGTGTTTGTTTGCATTCCTTGGCATCCTGGACTCTTGCAAACAATTGCTGTGTTCATATGTGTCTGCTGAGGTTTGATGCTGAGCAGAGCTTTTCAAGAGCCGCTTCAGACTTAGCTGATTGAATAGTTTGTGCCCGGCTCTGGGTGTTGAGCGTAGAACAGACAGCAGATTCACTCCAGTGTCTTCACACACTCATTAGGTGTTTTCTGTTCCAGTGAAGTCTCCAGACAAGGGTATATAGAAAGACATTTTTATAGGACCCAGTGTAAAGTTCAGGCCCAAATGCCTAACATGTCTAGGTGTTTTTGTCAGTAATGAGACTGGATAAATGGTATGTAAGTGCTTGCACCCCACTTTTGGAAGATTAATTTACCAAGAAGCATGGGGTTCAGTTGGTGTTGCTGACAAATATCTCAAAAAAGCCACAAAGGTGTCTTTGATCGTGACAGGTGAGGAGGTGGAGAAGCGTGCTTTGAGTGGTGAGCAGGTCCTGACTCGTGGCTCCTGGAGGGGCTGTGTCTGCTAGTGTGCAGTCTGGGGCTGTTAAAGGGGCACAGTGGGACAGGCTTGTTTTCAGTGGCTTAGATCTTAAACCACAACGTAAAATCTATTTCTGTTAAGCAGCTTCTCTGAAAAATTATCACAGCTCAGAGAGCCCTTCTATGACAAGCTGTGCCATTTTAAGCTCTTACTTTGAGGGAACTGAAGCATAGCCCCTGCCTACTGCTGGTGTTCTTTATTTGGGAATCATCCCGCCTAGCACAGAAGCTTGAGTGGTGGGGTCCTCTAGCTGTACTAGAGATTCTGCGCAGGGCTCTTAGAACAGGCTTGGGAGGAAAGTCAGAACCACGCActgtcattttggtttttttttaatttttcttaattgtttGGATCAACTAAGACCTTCATTTTAGTATGGTCCTTACCTCCTAACTGGCCTTTACCTGGCATTAAAGGGCTCTGATAACCAATCAGCTCCCGGTAGCTGAAGCAGTGCccttttttctatttaaattcaGTTTTCCCCTTGAACTCTGACCAGATGGCTCATCCTCTGTGCTCAGgatttgttgggttttgtttttcttgttttctttgttgatAACTGTAGCTTGTAAGAAATGTGGGCATGGTTTAATGAAGCATGTCACTGTTGGGATAAAAGAGTTTGCCAGTTCAAGATGATGAAAGGACATACTGGCTCTGCTTGCAGGAGGAAAGGCTAAAAGACATTTTGAATTAATGGGTTACCCTATAGAAAAATGATCTGTCATAAACCAAACagtgaaggggaagaagggaagaattcCAATTGACACAATTTAAATGAAACATGACTTTTCAAACAAATGAAGTTTCTTTTGGATTGCAGAAACTAAgcaatatttatatgtataattcaACTATTATTTGGTTTAAATGGGCTTGTTGGGAAATGTTatcatttttactattttctacagagaaaatattttccactttATCAAATAAATCTGGACTTTGAAATTACAGCCTGTTTTTATGTTCCAGCTGTCTATGTATGTTTTCCTGAAACTGTACATAAAATgtttttacattaaaatgaatTGCTGTATAAAGTACTGCATTATGCCATAATAAAGATACCGatgctttatattta