Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Scoc
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name short coiled-coil protein
Also known as 0610011C06Rik|2810002J11Rik|SCOCO
Coordinate chr8:84161121-84185055
Strand -
Gene summary Predicted to be involved in positive regulation of macroautophagy and regulation of protein complex stability. Predicted to be located in Golgi apparatus and nucleoplasm. Predicted to colocalize with endosome and trans-Golgi network. Is expressed in ganglia. Orthologous to human SCOC (short coiled-coil protein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Scoc

Retroname Coord Strand Genomic Region ENSG
ScocP2 chr17:38023031-38024831 - Intergenic
ENSMUSG00000067189 UCSC
ScocP1 chr3:135665958-135669589 - Intergenic
ENSMUSG00000105937 UCSC

Expression

Transcript Sequences

>NM_019708.4
GTCAATGCCCTTTTGTTAGGGCAAAGGTGGACCCCGGTGCTCTGCCACAGGCCTGTCGAGGCGTCCAGCAGCCAGTGCGCAGGCGTGCAATTTCCAGTTAGGATTGGTGGGAGGACGCCTCCTCGCTCGGCGCACGCTCCGTGGGCGGGAAGGGCGGGGCTGACGCTGTCAGTTGGTCGGAGAGCCGCGCGGCCTGAGGCTTCCTACCCATCCCGCCTCTTCCCGGCGCTTCAGACGCAAGACCATTCTTTAAAGAGTTGGCGTTCGAGGGCTGAAAGTCTGCTACCCAAGATGATGAATGCTGACATGGACGCAGTTGATGCTGAAAATCAGGTGGAACTGGAAGAAAAGACTCGACTTATTAATCAGGTGTTGGAACTCCAACACACACTTGAAGATCTTTCTGCAAGAGTAGATGCAGTTAAGGAAGAAAATCTGAAGCTAAAGTCGGAAAATCAAGTTCTCGGACAATATATAGAAAACCTCATGTCTGCTTCTAGTGTTTTTCAAACAACTGatacaaaaagcaaaaggaagtAAAGGGCTCACCTCCCTCTCTTCTATGGATTGctgctttttttcttcccccttaAGGCTTGGATATGATCCAAAAGTTAGAGTATCTTTGTTCTTCCCTGAGTATTTATAAAGAGAATGTCACATCTAGGTAACACTAATGCTGAACAGGAGCATCTCTGAGTTAACGCTATATGTATACGTTAGTCTATGAAAATGTGCACATGTAGAGACTTTATATTAGAATTACAGATATTTATGAAACTTGAAGATGAATGTTTTGCCAatttgcttatatatatataggttTAGCACTGTCTTTTATCATAAGCCTAACtagtaaaatatacaaaaaaataacCATGTTGTGAAAAGTGACCAAAACCATGTACTGAATGCACAGCTTCTGTACCTTGTGCACCGTCTTGTGcctctcccatctccctccctgaCGGTAACTTCAGCAGTTTCTCCTACAAGAGTAACCTAAACTAGAATTGTTGACACTTAACCAAAATAAGACACTTTCTTATCTAAGGCTTGCCGTTTGTGATATTTAGTAATAAGATAGGATTGCTGGTTTCTCTTTAATCAATCGAAAGTAGATTGAAGCTATAGAAAATGAAGAGTTTTCTTTGAAATGTAAACTGCCACACTGAGAAGCTAAAAACTCCCTATTGCATAAAATAGTTCATTTGGTGTTGAAAAGATAGGAATGCTGGTCATATGTGTgtgagaaattaaaaaacaacaaacaaacaaaaaacttgagaAAAGATAGGAATAAGAAGGAAAACTGGATTAACAGAAATAACCAGCTCGCAGTGTTTTCCCTCTAAATGTGTATTACCTCTGGCCCACAGCTGCACTTTGGGGACATATATGAAAGTGGACTGAGTCTAATGTAAGTGGATTAAGAGAGACTAGTTAAGAGTTTGGTCTCAAAGTTTATTTGTACCCAGGAAATGAACTTTTGCAAAATTAATTGAGAGTATATTAATATCAGAATCATGAATATAAGAGTTTTGTATATGTGATAATTATTAACCTCGGTATTTTATCTCAGTTGTTTTCCCAGAATTTCTGTAAACTCAACTACTTAGTTTGCAGAATTTTAGTCATTCttttaacaaattttaaaaatttagtttgTAGCTTCCATTTGATAAGGAGCTGATATCAGAAATAATAGTGAAGTCTTATAATAGGAAAGATCCACTAATGCAGCTGGTGGCTCTTAGGCTGGGCTGCTTTGACTTGTGGAATTATCTAATGTATTAATGTAAGCCTTGATGAGTGACGTTAGCTATATGGATGTGTAATCCTCACATTGCAGACATTTTGCAACCCTTTTGTGACCTTGTTACAGATATTTAAAATTGTGTTCAAGTTCTGCTTTGCTGTTTAATAAAAAGCTGTTTcagaggttt