Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Pdlim5
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name PDZ and LIM domain 5
Also known as 1110001A05Rik|Enh|Enh1|Enh2|Enh3|LIM
Coordinate chr3:141945346-142101480
Strand -
Gene summary Predicted to enable cytoskeletal protein binding activity; protein N-terminus binding activity; and protein kinase C binding activity. Predicted to be involved in actin cytoskeleton organization; cell growth involved in cardiac muscle cell development; and regulation of synapse organization. Located in Z disc. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; limb mesenchyme; and musculoskeletal system. Used to study dilated cardiomyopathy. Orthologous to human PDLIM5 (PDZ and LIM domain 5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pdlim5

Retroname Coord Strand Genomic Region ENSG
Pdlim5P1 chr8:22897466-22899302 + Intergenic
ENSMUSG00000109938 UCSC

Expression

Transcript Sequences

>NM_019809.3
GGCGAGCGCGGAGGCGGAAGTTCCCCACCGGCTTGAGAGGGACGGCGCAGGCACCGCGAGCCACTTGTCAGCGCTGGTCTGAGGCGGAGGGTGCGCCGCGCCGGTCAGGAGtttctttcattttctagaaCTGCACGTTGAACCCTGGGAACCATGAGCAACTACAGTGTGTCATTGGTCGGCCCAGCTCCTTGGGGTTTCCGGCTCCAAGGTGGCAAGGATTTCAACATGCCTCTGACAATCTCTAGTCTGAAGGATGGTGGCAAGGCATCTCAGGCACATGTCAGAATAGGGGACGTGGTTCTCAGCATCGATGGGATCAGTGCACAGGGAATGACGCATCTTGAAGCCCAGAACAAGATTAAGGCTTGTACGGGCTCCTTGAATATGACTCTACAAAGAGCTTCAGCTGCAGCCAAGAGTGAGCCGGTTTCCGTCCAGAAGgGTGAACCTAAGGAAGTAGTTAAGCCTGTGCCCATTACATCTCCTGCTGTATCCAAAGTCACTTCCACTACCAACATGGCCTACAATAAAGCACCACGGCCCTTTGGTTCTGTGTCTTCACCAAAAGTCACATCCATCCCATCACCATCGTCTGCGTTCACCCCAGCCCATGCCGCCACTTCATCACATGCTTCCCCCACACCTGTGGCCGCTGCCACTCCCCTCCACCTCTCTGCATCCGGACTGCATGTTAGTGCCAATCTTAGTGCTGACCAGTGTTCATCTCCACCGAACACTGGTAAACCTGCAGTTAATGTCCCACGGCAGCCCACAGTCACCAGCGTGTGTTCCGAGTCTGCTCAGGAGCtagcagagggacagagaagaggaTCCCAGGGTGACATTAAGCAGCAAAATGGcccaccaagaaaacacattgtggagCGCAACACGGAGTTTTATCACATACCCACTCACAGTGATGCCAGCAAGAAACGGCTGATTGAGGACACTGAGGACTGGCGCCCCCGGACTGGAACGACTCAGTCTCGTTCTTTCCGGATCCTTGCCCAGATCACTGGGACTGAGCATCTGACAGAATCTGAAAATGACAATACGAAGAAGGCAAAGGAAAAGATACCCCTTCACGTCTTTAGTCCCAAATACACAAAATTACGTGACTGGCACCATGAAGTTTCAGCACGTGCTCTTAATGTACAGTGACTCTGAGCCCTGCTCCCCCACCTAAGCAGCTAGCACATACCTTTCATTCacgttttctttcttccatctatAGCAAAATCTGTTTTACATTTGACTCgtgaaaactagaacaattggtGTGCTTTCCTAACAATTTCCGGTTGTGAACACGAGAAGACTGAACACGTTGTATCCTAATTGGTAGCTCACAAATGCAAAGCCAAAGGATGGAAAGGAAATGACCTGACCCCTTCAATGTATTTACATCTATTCTCACTGCTTCAGTCATGGTCGTGGTACAGGAAGTCTTTTTGTAAGGTTGATTGGTTGAAGCAGAGGTGGATGAACAAATAATGTCCCTGTCTAATTAGGGAAGTGAGCCCCTTATGTTATCACAGTTCTTAAGTTTACTTTCAGGTTCATCATTAAGGAATGTTCAAAGTTGATTGTAAATTCTCCCATAGAGCAAACATGAGGAGGCAGATTCAGCAGAGAGTAATAGAGCTCATTGTAGACGTAGGTGTCTTGAAAAGCTGGCACTGTTTAGGtggctacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacaaaacgagatATTTTACCCTTGCTTGCAGTGGGGGAAACAGTATTCTTTTACTTTAGTTAATTTTAAAGATCCTGTTATCtactaaaggaaaaatatatataaggCAGTGGGTGTTTTCATGGGATACATAACTTTTAGGTGTCAATACTAAGACACATAGCTTTGCTGCATCTTTATGTTGGAGGAAAATGGcataaaataagttttaatttaatgtttctgATGTTGGAGAAATATACTTGGAGTTATAAACTACTGTGTGTTGTTGCTCCTGTTCTTACAAAGATATATTTGACCAGTACAGAGAAATGCAATATATCTGATTATAAATGCCTTCTGCCTTGTAAttaatatagtatattatatattagatcTAACCTCAGTAATAAATGCATTTTGAAGCTTGGAAAGAGTTGTAATAAAGTTGTCTGTACCGTTGCTCtatacttgttttctttctttgaggatAGTGACCTGCTATCCAGGATTTGTTAATATGTTATCCAGTAAAATAAGTAACTAccttgtcttttatttgggaacataTACTTCATGAAATTTCCAAACTGTGAATGTAAAACATGACAAAGACCTACTTTCCCCTTTTGTCCACCAGAGTTGCTAATTGTTTAAAGCAGCTTCTTATGTGAACAATATATGATCTGTCATCCTG