Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ykt6
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name YKT6 v-SNARE homolog (S. cerevisiae)
Also known as 0610042I15Rik|1810013M05Rik
Coordinate chr11:5905758-5917780
Strand +
Gene summary Predicted to enable SNAP receptor activity and protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; retrograde transport, endosome to Golgi; and vesicle docking involved in exocytosis. Predicted to act upstream of or within protein transport and vesicle-mediated transport. Predicted to be located in several cellular components, including Golgi apparatus; dendrite; and neuronal cell body. Predicted to be integral component of plasma membrane. Predicted to be part of SNARE complex. Is expressed in coelomic epithelium of testis; embryo; and ovary. Orthologous to human YKT6 (YKT6 v-SNARE homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ykt6

Retroname Coord Strand Genomic Region ENSG
Ykt6P1 chr11:92683600-92684119 - Intergenic
ENSMUSG00000081141 UCSC
Ykt6P2 chrX:76336214-76338614 + Intergenic
ENSMUSG00000082517 UCSC

Expression

Transcript Sequences

>NM_019661.4
CCGGAACCGGAAGTGGGCCTTACTCTAGGAGGAAGAAGCCGGCCGGGCCCCGTCAGGAGGCGGCCGCCGCTGTTCTGAGGGACTGTGGCCGCGCTCCTGGGAGCGGGTCTGGGGCTCAGCCGGCGGCCCGAAGGTGCGGCGCCATGAAGCTGTACAGCCTTAGTGTCCTTTACAAAGGCGATCCGAAAGCGGTGCTGCTCAAGGCCGCGTACGACGTGTCTTCCTTTagtttcttccagaggtccagTGTGCAGGAATTCATGACCTTTACAAGTCAACTGATTGTGGAACGCTCGGGGAAAGGCAGCAGAGCTTCTGTCAAAGAACAAGAGTATCTTTGCCATGTCTACGTCCGGAGCGACAGTCTGGCAGGTGTGGTCATTGCTGACAGCGAATACCCTTCCAGAGTGGCCTTCACCTTGCTGGAGAAGGTACTAGATGAATTCTCCAAGCAGGTGGATAGAATAGACTGGCCAGTAGGATCCCCGGCTACAATCCAGTACACAGGCCTGGACGATCACCTTAGTAAATACCAGaACCCCCGAGAAGCTGATCCCATGAGTAAAGTGCAGGCCGAACTGGACGAGACCAAAATCATTCTGCACAACACCATGGAGTCTTTGTTAGAGCGAGGCGAGAAGCTTGATGACCTGGTATCCAAGTCAGAAGTGCTGGGAACACAGTCGAAAGCCTTCTATAAAACTgCCCGGAAACAAAACTCTTGCTGTGCAATCATGTGACGTAGCCCACGGAGGCAGGCGCTGGATCGTCACGTCACATCAGCCCCTGGCGACAAGCAGTGTCTAGAAGAGGATCTGGAGCCAGGCAGACTGGCTGCTTTTATTTTGAAGTTCCCAAGAGGAATGGAGGGATGCTTTAAGGGTGGGAACATTGATGTTCGTATGTGTGGTTGTGACTTTGGGAAGGAATTTGAGGACCTCCAAGATGTAATGTTGGGAAAATGAAACCATAAACTCTAAGTGGCTCTTATAGGTGCTGAAGGGCTTATTCTCAGCTAACCCTGGAAGGCTCTAGGGAGGGAGTCTTTTTCCTGATCCTTGGTATGACTTAGGATTCATTTGTGCATTCACGATATTAACTCTCCatgaatggggtgggggaggggctggggtgatAGGGCTGGGGTGGGCAGAGTCTGAACACTCCAGCATTCTACTACCTTGcactgtgggggcagggagaaagTCACCATGGCCAGAGAAAGGTAGTGGTCACTGGGTCTCACATGTTTAGCTTGCCTGCCTGGTAGGACTGGCTTCTGGCAGGGACAGGGCCTATCCTAAGTACCTTCACCCAGTATCACAAAGATGACTTTGTGGGAGGTACTTAGAATGGGCTAAGGTGGACAGGCTGTGTAAGTTTTATCAGCTAGCAGACTGAGTGTGGGCTGGAATTGTTCTGGTGTTGGGAGGGTCAGCTGGGAGTGTCCATCTTTAGGgaagaagcagacacaggtgccTTCAGCTGTCCAGTATGGAGGAACACTCACCTGGACTTGCAGTTGGACTTTGAACATCAAGATCAAATTAGTGGATGCTGTCGTCTCTTAAAGCTGGTTTTATTTGTCTCTGGTCCACAAGAGTGTTTTGGCAACTGCCTGGAGCTTGCATGTTGGGACAAATCAGGACAAGTGCCAGCAGCCTGAATATTTCCAGTGCCTACCTGTGGTCTGTCCAGTTCTGGCCTGTAAGCCCTTCCCTATCAGAGACAGTTGCAGAGTAGAGGATATTGAGGGGTTGAGGGGTTGATCTGAGCTGGTGCCACTGCGAGCACAGCCTACATGGTGAATCCAGAGTGTGCCCGGTTCCACATCACCTCTTCATGGTCTGCTGTGCACAAACTATATCcgagagatcctgtctccccAAAAGCCACTGCTGGGATGCTGGCCTCTGATTTTTGAGCCAGCGTTGTCTCACTCTGATCCCTACCCTGAGCCTGCTGAACTGCCCTCAGAGTGCTCATATGGGGAGGGGGATATCTACTGTGGCTTCCAAAAGTCCCCACTAGTTGGTGTACCTGTCTATTTCTCTGGATACTGCTAGCCAAAGGGCTCGGGCCCCCCCCTGGACTGACCTGCCCATGTAATTTTCCCACTGCCACAGACCTCTCCAACCCAGGGCCCCTGGACAGCACAGATCCAGTGTGTTGCTGGCACTTGAGGTGTAATAAATGGCCTGGGGTGCTGCCTCTTTCTCTTgttgctctgggggtactggggaggaggagaggtgggTGGCAGTAGAAGTTTGTGGGGAGAAGGTAACCTTTGCCTACATATGGCTGTCCTACAGGGTCTCCCTTGCCTGCAGTGGGAGAGTTGCCCAGtggttccccatcccccattatATTCTAATGCTAAATCACTTGGCAAGAGTGTATTTTAATGATGCCTAATTTCTCTATGTTCTGTTTGAAGGTTTCTGTCCAGATAAAATTGTCTTTTGAAATTCAA