Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Lgi1
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name leucine-rich repeat LGI family, member 1
Also known as -
Coordinate chr19:38253135-38297387
Strand +
Gene summary Involved in neurotransmitter receptor localization to postsynaptic specialization membrane. Located in extracellular space and glutamatergic synapse. Is active in synaptic cleft. Is expressed in several structures, including central nervous system; diaphragm; sensory organ; and skeletal musculature. Used to study familial temporal lobe epilepsy 1. Human ortholog(s) of this gene implicated in familial temporal lobe epilepsy 1. Orthologous to human LGI1 (leucine rich glioma inactivated 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lgi1

Retroname Coord Strand Genomic Region ENSG
Lgi1P1 chr15:91923883-91925479 - Intergenic
 ENSMUSG00000116093 UCSC

Expression

Transcript Sequences

>NM_020278.3
AGCAGTGCGCTGCCTGAGCGAGGAACAGCTCACGAATCAGCTGGAGgtccctgttttgaaaaaaaaaaaaaaaaaaaaaaaagcagatagaGAAGCAGAGAAGGGTGGACTCCTATGTGACCTGTTCTTAGAGCAAGACAATCAGCAGCTGAATTCCAGAAGCCCTGTTCATGTGTGGGGATATTCTCTCGACTGCATGGAATCAGAAAGCAGCAGAAGGATGGGAAATGCCTGCATTCCCCTGAAAAGAATTGCCTATTTCCTATGCCTCTTTTCTGTGGTTTTGCTGACTGAGGGGAAGAAACCAGCGAAGCCAAAATGCCCTGCCGTGTGTACTTGTAGCAAAGATAACGCTTTATGTGAGAATGCGAGATCCATTCCACGCACCGTTCCTCCTGATGTTATCTCACTatcCTTTGTGAGATCTGGTTTTACTGAAATCTCAGAAGGGAGTTTCTTATTCACACCATCGCTGCAGCTCTTGTTATTTACGTCGAACTCCTTTGATGTGATCAGTGATGATGCTTTTATTGGTCTTCCACATCTAGAATATTTATTCAtagaaaacaacaatatcaagtcCATTTCAAGACATACTTTCCGGGGACTCAAGTCTTTGATTCACTTgaGTCTTGCAAACAACAATCTCCAGACACTCCcaaaagacattttcaaaggCCTGGATTCCTTAACAAATGTGGACCTAAGAGGGAACGCATTTAATTGTGACTGTAAGTTGAAGTGGCTGGTGGAATGGCTCGGCCATACCAATGCAACTGTGGAAGACATCTACTGTGAAGGCCCACCGGAATATAAGAAACGGAAAATCAATAGCCTCTCCCCCAAGGATTTTGACTGTATCATTACAGAATTTGCAAAGTCCCAAGACCTACCTTATCAGTCGCTGTCCATAgacactttttcttatttgaatGATGAATATGTAGTCATTGCTCAGCCTTTTACTGGAAAATGCATTTTCCTGGAATGGGACCACGTAGAGAAGACCTTCCGGAATTATGACAACATTAcaggcACGTCCACTGTGGTGTGCAAGCCCATAGTTATTGACACTCAGCTCTATGTCATTGTGGCCCAGCTGTTTGGTGGCTCTCATATCTATAAGCGAGATGGTTTTGCAAACAAATTCATAAAAATCCAAGATATTGAAGTTCTCAAAATTCGAAAACCCAATGACATCGAAACATTCAAGATTGAAGACAACTGGTACTTCGTTGTCGCTGACAGTTCCAAAGCTGGGTTTACTACCATTTACAAGTGGAATGGAAACGGATTCTACTCCCACCAATCCTTACATGCCTGGTACAGGGATACTGATGTGGAATACCTTGAAATAGCCAGACCACCATTGGCCCTCAGAACACCTCATTTAATCCTGTCCAGTAGTTCTCAGCGCCCTGTTATTTACCAGTGGAGCAAAGCAACACAGCTATTCACTAACCAAACCGACATTCCTAACATGGAGGACGTATACGCGGTGAAGCACTTCTCTGTGAAAGGTGATGTGTACATCTGCTTGACCAGATTCATTGGCGACTCTAAAGTCATGAAGTGGGGCGGCTCCTccttccaggacatccagaggaTGCCATCTCGAGGATCCATGGTGTTCCAACCTCTTCAGATAAATAATTACCAATATGCAATTCTCGGAAGCGATTACTCCTTTACTCAAGTGTATAACTGGGATGCAGAGAAAGCCAAATTTGTGAAGTTTCAGGAGTTAAACGTTCAGGCACCCAGATCATTCACACACGTATCCATTAATAAGCGtaattttctctttgcttccagTTTTAAGGGAAACACGCAGATTTACAAACATGTCATAGTTGACTTAAGCGCATGAGACACCAAACTCCACGGCTGCCATCGGAAACTTTCTACAGTGCGTGACCTGGATGAACTCAATGCATGATGACTCTTCTTATCACACTTGCAGATGAATACCTTTCAACACTGAGACTGCTAAAGCCAATACTACCAGTATCACCATCCTTAACTGTCCGGTCCAGTGGTGTGGGAAGTTACCTTTTATAAGACAAAAGTTTCCTTATGTAACTGTTCTTTGCAGTGAAGATGTGTAAATAAGCGTTTAATGGCATCTGTTACTCCGAAAAGAAATATTCATATgtacttttccatttatttattcacgtGTTCAGAAACAACTGCcaaataaaatgtttacattttctttcatatCCCAAAGGTAATTATTTACAAGAGCTGTTTGATTCCTGTTGATTGTATGTTGAGGAAATAGTTTTATACACTAGGATTATATTTGGATCAAGGATTTATTGTATGAATATTGAGTAAAgataacaaatgaaaataatttcccaTAATTTATAAGCACCTTTATCCGGGTTCTATCCGTGGGTTTTGAATACTCAGAAGTCACGACGTTTAGGGACACTTAAAGGTGAAAGGGTAACACCCTTCAATGAGAGGGAGTTTGCCTATTATGATAAGGCTAACCTGTAATGAGAAGGAAGACCACCCTGTTCTATCTGATAGCCTGGGTTAAATACCACTCAGCCATTTTATAGAAGAAatttcagatttaggattgaaAAGCTCCTGATCTGGGACCTTCTGAATATCTAACTCTAGAGTCTCCTGACAGCTGGTAGATTGTAAATTATGGAGAGCACTTGCCTCCCAACATGCTGGCCCTGGAGGCCTCTCTATCTGGCAGAGGACATTTTGCTTCTAGACACTGGATTTGCTGTGACTGACCTGCCACACAGTGCCTGTGAGGCTCATGTTTGATTTTCTAGATTCCTGCTTCTGGATCACTTGAGTCATTAGTAGCTAGCACAATGCCTGTTATGTACATGTAGGCTCTCAAACATTGCTTTTCAAAGGCTGAGGATATAGTTTCACGGAAAAGTACTCAATGTGGCCTGTGTAAAacctggagttcaattcccagcataaaACAAAAGAGTTTGCGGGGGTGGAGGGGGAACGAGTGACTCCTTCTCTTATAATAAACTCCACGGGTCCCTCTGACCTATCGAGTACTTACTGGCTACTTGTTCAGAATATGGTGTGGTTGTGGGTAACTAATACAGGAGGAGGGTGCAATGCTCACCCTCTGTAGTCTTGAAAAAGATTGGCAGCGGGCTAAATATACAAAAACATCTATAGATTAAGCAATGTGTACAAAGAATGACCTGAAAATTCTAGATTTTGAGTATCATGGGAACAACCAGAGCAACTTTGGGGAAGCTATGCTCTTCGTCTGACTTAAAGGGAAGAGGCAAAAGAAAGTGTGTAGGGAAGACATTGCGGGCACAAACTGGTTATGTGTGCTGCCTCTATGGAGAGCTTTTGAGCTTGCTATGTTCCCACTGGATGGAGGTAGGCAGACAGCAGTACCCTCTGCCCAGGATAAGTCTGGTTGCCTGGAGCATCAGGGGTCTCCACAATAATCACACAGTCTCCAAAGAAGCAACACCCTGGGTCACCACGCACAAAGACAGAATTTCATTACTCATCTAGAAAAGATAGTAGATTTGGCTTCAGAGTGATAAGGAAGAGGAAAGCTTAACTCCTGATCATTCGCTGGCCTTGGAATGCCTTTTCCTTTGTTCTAATAAGCAACATCATCATATGCTGCTGGAGGACGCCTGCACTGTACAGTCGGAGTTGAAATCTAGCTCTGCCATGCACAGGCTTTGTAACAGGAAAGATCTTAACCAACCTGAGCCCACTTCTTCATTCGTAAAGATGGATAACAAAACCTACTTCTGAGAAGAGGGATAAATGAGAAAACCCGTGAACAGCAGATGGTATTTTTTCCAAATACATCCCCTACCGCACCTTGAACCCCCACGCCTGTGAGACCTTGTCCAAAATTCACTAAGAGGTAGCATCGAACTCACCTGAATGGTTGGTGACTTGCTGTTAATACGTTGAATTTGGTGAAAGTGATAGTTTGGCTTCCACGCTAAGTCATAAAAACCATGAACTCCTTCTTGCCTTGCAAATTGGAACACTTGCCTGCAGAGCCCAGAACATCTGCATAAGAAGTCTTTCTAACCAGAGGCCATTCTTCTTTGTTGAAAACCAATCCCCTCGGGAGCAACCACCTCCTGGTGCTCTGGTCAACAGGCCCAGCTGGTGTTGCAGCCAACAGCCATCATCAACCACCAGTCCTGTAAAGCCTACAGCTCCAGACCGTGTGGTCAAGTTCCTACCAGACATCAGACCTTCCCACCTAAGGGGCAGCCATTAAAGAGCAGCAAGCCATCCACAATATCCCTGCCCAAATTTGTGACCCGGACTCTATGAGAATAATAAAGTGGTTGTTTTAAATGGA