Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Gtf2ird1
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name general transcription factor II I repeat domain-containing 1
Also known as 1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11
Coordinate chr5:134386515-134485628
Strand -
Gene summary Enables DNA-binding transcription factor activity. Acts upstream of or within transition between slow and fast fiber. Located in nucleus. Is expressed in several structures, including alimentary system; embryo mesenchyme; eye; genitourinary system; and nervous system. Used to study Williams-Beuren syndrome. Orthologous to human GTF2IRD1 (GTF2I repeat domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Gtf2ird1

Retroname Coord Strand Genomic Region ENSG
Gtf2ird1P1 chr1:135797526-135798055 + Intergenic
ENSMUSG00000101482 UCSC

Expression

Transcript Sequences

>NM_001081469.2
TCCGCCGCAGCCCGCGCCGGGGGTGGGGGCCCCGCGCAGCCCCCGGCCGGCCGCCCGCACCGCGTccgccctccttccctccctccctctactgaTCCTGTCCCCCATTCCCGGATTATTAACTCAGCAACCAGAGGCGACTGGATCTACCGAGTCCTGGCCACCGGGCCCGGGCCGGGGCGCCCGGAGCGCTTGGGGATCCTGCAAGGTGACCATGGCCTTGCTGGGGAAGCACTGTGACATCCCCACCAACGGCTGTGGGTCTGAGCGCTGGAACTCCACCTTCGCCCGCAAGGACGAACTCATCAACAGTCTGGTGTCCGCCTTAGACTCCATGTGCTCGGCGCTCTCCAAGCTGAACACGGAGGTGGCCTGCGTGGCGGTACACAATGAGAGCGTCTTCGTGATGGGCACCGAGAAGGGAAGGGTGTTTCTGAACACTCGGAAGGAGCTACAGTCAGACTTCCTCAGGTTCTGCCGGGGACCCCTGTGGAACGATCCAGAAGCAGGACACCCTAAAAAGGTGCAGCGCTGTGAAGGCGGTGGCCGGAGCCTCCCGCGGTCCTCTCTGGAGCAGTGCTCGGATGTGTACCTGCTGCAGAAGATGGTAGAGGAAGTGTTTGATGTTCTTTATAGTGAGGCTATGGGCAGGGCCACCGTGGTACCTTTGCCCTATGAGAGGCTGCTCAGGGAGCCGGGGCTACTGGCGGTGCAGGGGCTGCCCGAGGGCCTGGCCTTCCGGAGGCCAGCAGAGTATGACCCCAAGGCACTCATGGCCATATTGGAGCACAGTCACCGAATTCGGTTTAAGCTCAGGAGGCCTCCTGATGACGGTGGGCAGGACACGAAGGCGCTGGTGGAGATGAACGGTATCTCTCTGCTACCCAAGGGGTCCCGAGACTGTGGTCTGCATGGCCAGGCCTCCAAGGTCGCTCCCCAAGACCTGACCCCCACCGCCACCCCATCCTCTATGGCCAACTTCCTGTACAGCACTTCGATGCCCAACCACACGATccgggaactcaagcaggaggTGCCAACCTGCCCGTTGACCCCCAGCGACCTGGGCATGGGCTGGCCCGTGCCTGAGCCCCATGTCCCCAGCACCCAAGATTTCTCTGATTGCTGTGGACAGACGCCTGCAGGGCCTGCTGGGCCTCTCATCCAGAATGTCCATGCTTCCAAGCGCATCCTCTTCTCCATCGTCCATGACAAGTCAGAGAAGTGGGATCCCTTCATCAAGGAAATGGAGGACATCAATACCCTGCGGGAGTGCGTGCAGATTCTGTTTAACAGCAGATACGCGGAAGCCCTGGGCCTGGACCACATGGTCCCTGTGCCCTATAGGAAGATTGCCTGTGACCCCGAGGCTGTGGAAATTGTGGGTATTCCAGACAAGATCCCCTTCAAGCGACCCTGTACTTACGGAGTGCCGAAGCTGAAGAGGATTCTGGAGGAGCGACACAGCATTCACTTCATTATCAAGAGaatGTTCGATGAGCGCATTTTCACAGGGAACAAGTTTACCAAAGACCCCATGAAGCTGGAGCCAGCTAGCCCACCAGAAGACACTTCCACAGAAGTCTGTAGGGACAGCATGCTGGACCTGGCTGGGACTGCTTGgTCAGACATGAGCAGCGTCTCTGAAGACTGTGGGCCAGGAACCTCAGGAGAGATAGCAATGTTGAGGCCTATCAAAATCGAGCCAGAGGAGCTGGACATTATTCAGGTTACGGTCTCAGATCCTTCACCTACCTCTGAGGAGATGACTGACTCGTTACCTGGGCATCTGCCCTCAGAGGATTCCGGTTATGGGATGGAAATGCCGGCTGACAAAGGCCCCAGTGAAGAACCGTGGTCAGAAGAGAGGCCGGCCGAAGagAGCCCTGGTGACGTGATCCGGCCCCTACGGAAGCAGGTGGAGATGCTGTTCAACACGAAATATGCCAAAGCTATTGGTACCTCAGAGCCGGTCAAGGTGCCCTACTCCAAGTTCCTGATGCACCCGGAGGAGCTGTTCGTACTGGGACTGCCTGAAGGCATCTCTCTTCGGAGACCCAACTGCTTTGGGATTGCAAAGCTGCGGAAGATTCTGGAAGCGAGCAACAGCATCCAGTTTGTCATCAAGAGACCCGAACTGCTCACTGACGGTGTCAAAGAACCTGTTCTGGACACTCAAGagaggGACTCCTGGGACCGTCTTGTGGACGAGACCCCGAAGAGACAGGGCCTTCAAGAAAATTACAACACCAGACTCTCGCGGATCGACATCGCCAACACGCTTAGGGAACAAGTCCAAGACCTGTTTAACAAGAAATACGGTGAAGCTCTGGGCATCAAATACCCAGTGCAGGTGCCCTACAAGAGAATCAAAAGCAACCCAGGCTCGGTAATCATTGAAGGCCTACCCCCCGGGATCCCATTCCGCAAACCCTGCACCTTTGGCTCCCAGAACCTGGAAAGGATTCTCTCTGTGGCTGACAAGATCAAGTTCACGGTCACCAGGCCATTCCAAGGACTTATCCCAAAGCCTGaaaccaaaattctcactacaggaCATGAAGCTGGGAAAACCACCAGACCAAGGAGACTGCAACAGGACACCTGGCAGCCAGATGAGGATGATGCCAACAGACTGGGGGAGAAGGTGATCCTCCGAGAGCAGGTGAAGGAGCTCTTCAATGAGAAATACGGTGAGGCCCTGGGACTGAATCGGCCTGTGCTGGTCCCTTACAAACTGATCCGGGACAGCCCAGATGCCGTGGAGGTGAAGGGCCTCCCAGATGACATCCCCTTCCGGAACCCCAACACCTATGACATCCATCGGCTGGAGAAGATCCTGAAGGCCAGGGAGCATGTGCGGATGGTCATCATCAACCAGCTCCAACCTTTTGGGGACGTCTGCAACAATGCCAAGGTGCCAGCCAAAGACAACATTCCCAAGCGCAAGAGAAAGAGGGTCTCTGAAGGCAACTcagtctcctcttcttcctcctcttcatcttcgtCCTCTAACCCAGAGTCTGTGGCATCCACCAACCAGATCTCCCTCGTGcAGTGGCCAGTGTACATGGTGGACTATTCCGGACTAAACGTGCAGCTTCCGGGCCCCCTTGATTATTAGACCTCAGAGCCGAATCAGGACCTCAACTCAAAAGACTAAAGGAAAATGTAATTTATGTACAAAGTATATTCGGATATGTATCAATGCCTTTTAGTTTTTCCAATGATTTTTACACTATATTCCTGCCGCCAAGGCCTttttaaataagtaaagaaaatgaaaaagaa