Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name PSMD7
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name proteasome 26S subunit, non-ATPase 7
Also known as MOV34|P40|Rpn8|S12
Coordinate chr16:74296814-74306288
Strand +
Gene summary The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes a non-ATPase subunit of the 19S regulator. A pseudogene has been identified on chromosome 17. [provided by RefSeq, Jul 2008]

Retrocopy(s) from PSMD7

Retroname Coord Strand Genomic Region ENSG
PSMD7P3 chr1:155845389-155846225 + Intragenic
ENSG00000234937 UCSC
PSMD7P4 chr1:185280792-185281888 + Intragenic
ENSG00000238061 UCSC
PSMD7P2 chr1:51372227-51373736 + Intragenic
ENSG00000232027 UCSC
PSMD7P1 chr17:66197634-66198707 + Intergenic
ENSG00000266707 UCSC

Expression

Transcript Sequences

>NM_002811.5
GGAAGAAGAGGAACTGGGCCTGAAAGGGTACCGGTGACCGCTACTGCTGCCGGTGTTTGCGTGTGGCAGGGAGCCAGGCCTGGCGAGCGGGGTGTGTCGCGATGCCGGAGCTGGCAGTGCAGAAGGTGGTGGTCCACCCCCTGGTGCTGCTCAGTGTGGTGGATCATTTCAACCGAATCGGCAAGGTTGGAAACCAGAAGCGTGTTGTTGGTGTGCTTTTGGGGTCATGGCAAAAGAAAGTACTTGATGTATCGAACAGTTTTGCAGTTCCTTTTGATGAAGATGACAAAGACGATTCTGTATGGTTTTTAGACCATGATTATTTGGAAAACATGTATGGAATGTTTAAGAAAGTCAATGCCAGGGAAAGAATAGTTGGCTGGTACCACACAGGCCCTAAACTACACAAGAATGACATTGCCATCAACGAACTCATGAAAAGATACTGTCCTAATTCCGTATTGGTCATCATTGATGTGAAGCCGAAGGACCTAGGGCTGCCTACAGAAGCGTACATTTCAGTGGAAGAAGTCCATGATGATGGAACTCCAACCTCGAAAACATTTGAACACGTGACCAGTGAAATTGGAGCAGAGGAAGCTGAGGAAGTTGGAGTTGAACACTTGTTACGAGATATCAAAGACACGACGGTGGGCACTCTGTCCCAGCGGATCACAAACCAGGTCCATGGTTTGAAGGGACTGAACTCCAAGCTTCTGGATATCAGGAGCTACCTGGAAAAAGTCGCCACAGGCAAGCTGCCCATCAACCACCAGATCATCTACCAGCTGCAGGACGTCTTCAACCTGCTGCCAGATGTCAGCCTGCAGGAGTTCGTCAAGGCCTTTTACCTGAAGACCAATGACCAGATGGTGGTAGTGTACTTGGCCTCGCTGATCCGTTCCGTGGTCGCCCTGCACAACCTCATCAACAACAAGATTGCCAACCGGGATGCAGAGAAGAAAGAAGGGCAGGAGAAAGAAGAGAGCAAAAAGGATAGGAAAGAGgacaaggagaaagataaagataaggaaaagagtgatgtaaagaaagaggagaaaaaggagaaaaagtaaaACATGTATTAAATAGCTTTTTTAATTTGTAAATTAAAATCTTACAAACTAAATCAGTGTGCTGCTAGAGGGTTCTTTTTCACTTGACATGCTTATTAGAAAGCTGACCCAACAAGAGCTCTCTGCCTCCGGTCACTCTTGCTGTGGTGCTACGTGGAAGTGAATGGAGACTGATCTCAAATCTGAACTGCAGCTTTCGCTGCTGTGAGTTGGGGATATGATAGTCAGCTCAGGCTTCAGATTGTATGAGAAAAATGAAGAGAAGTCAACAAATATTTTGGTACTCTTCATTCATTTATCTCTAAAACCAGGAGTTGAATTTTCCTCATCTTGAAAGACTCTTGGGGTCTGTTTCTGGTATTTTACAAAATTGCTAAGTGGAATGCATGAATTGCATTATGTTCTCTGGTAACACGTAGAGTTCAGACCCTTCTGAACTCTGTTGATAATACCACACCATGTTCTGGACCCATAGCTCTGGCATCCTCAGGGGTTGTGATCCAGCTCCATATATTGTTTACCTTCAAAGATACAATTAAATGGCTTGATTTTTAA