Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atp5j2
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F2
Also known as 1110019H14Rik|Atp5mf
Coordinate chr5:145120514-145128351
Strand -
Gene summary Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in mitochondrial ATP synthesis coupled proton transport. Predicted to act upstream of or within ATP biosynthetic process and ion transport. Located in mitochondrial inner membrane. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and skeleton. Orthologous to human ATP5MF (ATP synthase membrane subunit f). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5j2

Retroname Coord Strand Genomic Region ENSG
Atp5j2P1 chr1:189559402-189559820 + Intragenic
ENSMUSG00000102248 UCSC
Atp5j2P8 chr10:75118632-75118887 - Intergenic
ENSMUSG00000112116 UCSC
Atp5j2P9 chr10:80790160-80790568 - Intragenic
ENSMUSG00000083808 UCSC
Atp5j2P10 chr13:30915738-30916151 + Intergenic
ENSMUSG00000081905 UCSC
Atp5j2P2 chr2:18653762-18654175 - Intergenic
ENSMUSG00000086882 UCSC
Atp5j2P3 chr3:89024016-89024419 + Intergenic
ENSMUSG00000105654 UCSC
Atp5j2P5 chr7:122083433-122083661 - Intragenic
Intragenic
ENSMUSG00000087520 UCSC
Atp5j2P6 chr9:22003800-22004204 + Intragenic
ENSMUSG00000111446 UCSC
Atp5j2P4 chr4:41398310-41398713 + Intragenic
N/A UCSC
Atp5j2P7 chr9:65646647-65646950 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_020582.3
AGTTCTGCGGACACCAGGACTTCAAGATGGCGTCACTCGtGCCGCTGAAGGAGAAGAAGCTCATGGAAGTCAAACTTGGAGAGCTGCCGAGCTGGATAATGATGCGGGATTTCACCCCCAGTGGCATTGCCGGAGCCTTTCGGAGAGGGTATGACCGGTATTACAACAAGTACATCAACGTTCGGAAAGGCAGCATCTCGGGGATTAGCATGGTCCTGGCAGCCTACGTGGTTTTCAGCTACTGCATTTCTTACAAGGAACTCAAACATGAGCGGCGACGCAAGTACCACTGAAGAGGGGTCGCTGGAGGGCATTGCATGGCCGAGCATAACTGCCCGCCCCACTCCGACCTAGGAAGAATTCAACTGGCTGAACCTTCATACCCTGACTGAGAACTAGTGTCCAATAAAAGGTGACTGGTTCACATA