Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name PTMA
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name prothymosin alpha
Also known as TMSA
Coordinate chr2:231708525-231713551
Strand +
Gene summary Enables DNA-binding transcription factor binding activity. Involved in negative regulation of apoptotic process. Located in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from PTMA

Retroname Coord Strand Genomic Region ENSG
PTMAP4 chr12:9239320-9240428 - Intergenic
 ENSG00000231503 UCSC
PTMAP5 chr13:81689895-81691080 + Intergenic
 ENSG00000214182 UCSC
PTMAP8 chr3:117026517-117027707 + Intergenic
 ENSG00000243014 UCSC
PTMAP1 chr6:30633449-30634255 + Intragenic
 ENSG00000228415 UCSC
PTMAP10 chr7:138402944-138404600 - Intergenic
 ENSG00000213237 UCSC
PTMAP11 chr9:96909987-96911157 + Intergenic
 ENSG00000269907 UCSC
PTMAP18 chrX:15653333-15653747 - Intragenic
 N/A UCSC
PTMAP9 chr12:12110981-12112171 + Intergenic
 ENSG00000198134 UCSC
PTMAP16 chr14:92026486-92027567 + Intragenic
 ENSG00000259020 UCSC
PTMAP17 chr17:76651524-76652017 - Intergenic
 N/A UCSC
PTMAP3 chr20:18011864-18013057 + Intergenic
 ENSG00000218902 UCSC
PTMAP6 chr20:56700819-56701588 - Intergenic
 ENSG00000237000 UCSC
PTMAP2 chr5:118973660-118974812 + Intragenic
 ENSG00000197744 UCSC
PTMAP15 chr8:103559097-103559467 - Intragenic
 ENSG00000255105 UCSC
PTMAP12 chr9:94346472-94347654 - Intergenic
 ENSG00000282886 UCSC

Expression

Transcript Sequences

>NM_001099285.2
CCCCCACTGGCTGCTCTGAAAAGCCATCTTTGCATTGTTCCTCATCCGCCTCCTTGCTcgccgcagccgcctccgccgcgcgcctcctccgccgccgcggactccgGCAGCTTTATCGCCAGAGTCCCTGAACTCTCGCTTTCTTTTTAATCCCCTGCATCGGATCACCGGCGTGCCCCACCATGTCAGACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAAGGACTTAAAGGAGAAGAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGACGCCCCTGCTAACGGGAATGCTgagaatgaggaaaatggggagcaggaggctgacaatgaggtagacgaagaagaggaagaaggtggggaggaagaggaggaggaagaagaagGTGATGgtgaggaagaggatggagatgaagatgaggaAGCTGAGTCAGCTACGGGCAAGCGGGCAGCTGAAGATGATGAGGATGACGATGTCGATACCAAGAAGCAGAAGACCGACGAGGATGACTAGACAGCAAAAAAGGAAAAGTTAAACTAAAAAAAAAAAGGCCGCCGTGACCTATTCACCCTCCACTTCCCGTCTCAGAATCTAAACGTGGTCACCTTCGAGTAGAGAGGCCCGCCCGCCCACCGTGGGCAGTGCCACCCGCAGATGACACGCGCTCTCCACCACCCAACCCAAACCATGAGAATTTGCAACAGGGGAGGAAAAAAGAACCAAAACTTCCAAGGCCCTGCTTTTTTTCTTAAAAGTACTTTAAAAAGGAAATTTGTTTGTATTTTTTATTTACATTTTATATTTTTGTACATATTGTTAGGGTCAGCCATTTTTAATGATCTCGGATGACCAAACCAGCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACCATGTTCATTATAATCTCAAAGGAGAAAAAAAACCTTGTAAAAAAAGCAAAAATGACAACAGAAAAACAATCTTATTCCGAGCATTCCAGTAACTTTTTTGTGTATGTACTTAGCTGTACTATAAGTAGTTGGTTTGTATGAGATGGTTAAAAAGGCCAAAGATAAAAGGTTTCTTTTTTTTTCCTTTTTTGTCTATGAAGTTGCTGTTTATTTTTTTTGGCCTGTTTGATGTATGTGTGAAACAATGTTGTCCAACAATAAACAGGAATTTTATTTTGCTGAGTTGTTCTAACAAAGCTGTCTCAA
>NM_002823.5
CCCCCACTGGCTGCTCTGAAAAGCCATCTTTGCATTGTTCCTCATCCGCCTCCTTGCTcgccgcagccgcctccgccgcgcgcctcctccgccgccgcggactccgGCAGCTTTATCGCCAGAGTCCCTGAACTCTCGCTTTCTTTTTAATCCCCTGCATCGGATCACCGGCGTGCCCCACCATGTCAGACGCAGCCGTAGACACCAGCTCCGAAATCACCACCAAGGACTTAAAGGAGAAGAAGGAAGTTGTGGAAGAGGCAGAAAATGGAAGAGACGCCCCTGCTAACGGGAATGCTaatgaggaaaatggggagcaggaggctgacaatgaggtagacgaagaagaggaagaaggtggggaggaagaggaggaggaagaagaagGTGATGgtgaggaagaggatggagatgaagatgaggaAGCTGAGTCAGCTACGGGCAAGCGGGCAGCTGAAGATGATGAGGATGACGATGTCGATACCAAGAAGCAGAAGACCGACGAGGATGACTAGACAGCAAAAAAGGAAAAGTTAAACTAAAAAAAAAAAGGCCGCCGTGACCTATTCACCCTCCACTTCCCGTCTCAGAATCTAAACGTGGTCACCTTCGAGTAGAGAGGCCCGCCCGCCCACCGTGGGCAGTGCCACCCGCAGATGACACGCGCTCTCCACCACCCAACCCAAACCATGAGAATTTGCAACAGGGGAGGAAAAAAGAACCAAAACTTCCAAGGCCCTGCTTTTTTTCTTAAAAGTACTTTAAAAAGGAAATTTGTTTGTATTTTTTATTTACATTTTATATTTTTGTACATATTGTTAGGGTCAGCCATTTTTAATGATCTCGGATGACCAAACCAGCCTTCGGAGCGTTCTCTGTCCTACTTCTGACTTTACTTGTGGTGTGACCATGTTCATTATAATCTCAAAGGAGAAAAAAAACCTTGTAAAAAAAGCAAAAATGACAACAGAAAAACAATCTTATTCCGAGCATTCCAGTAACTTTTTTGTGTATGTACTTAGCTGTACTATAAGTAGTTGGTTTGTATGAGATGGTTAAAAAGGCCAAAGATAAAAGGTTTCTTTTTTTTTCCTTTTTTGTCTATGAAGTTGCTGTTTATTTTTTTTGGCCTGTTTGATGTATGTGTGAAACAATGTTGTCCAACAATAAACAGGAATTTTATTTTGCTGAGTTGTTCTAACAAAGCTGTCTCAA