Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Wdr12
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name WD repeat domain 12
Also known as 4933402C23Rik|Ytm1|Ytm1p
Coordinate chr1:60110520-60137659
Strand -
Gene summary Acts upstream of or within Notch signaling pathway. Located in nucleus. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and immune system. Orthologous to human WDR12 (WD repeat domain 12). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Wdr12

Retroname Coord Strand Genomic Region ENSG
Wdr12P2 chr7:12912745-12914122 + Intergenic
 ENSMUSG00000048261 UCSC
Wdr12P3 chr15:47563083-47567296 - Intragenic
 ENSMUSG00000089828 UCSC
Wdr12P1 chr5:42091715-42093138 - Intergenic
 ENSMUSG00000106884 UCSC

Expression

Transcript Sequences

>NM_001199060.1
GAGGGTCAGGAGGTGACGGGAGGAGGCGGCAGGGGGACGAAGGGAGGTTGGGAGGGAGCGTCCGGTCGCTGGGCACAGACAGCTCTGCCAGGCCTCCGGCTCCCCCAACCCTGCCGCCGCAGCGAGCCCCACAACGCGAGAGGGGAGTCCGCCGTAAGCAGAAGGGAGAAAATTCAAAACGAGACTACTCAACCTCGTCTTGGCTCCGAGGCCGCGCCGTGGAGACCAGCACAATGCGCAGGCGCACCCCTCCTGGAGGCGCAGCGCAGGTCCATCAGATTAGACCCTTCTCAGCCACCGTCGCCCAGTTCCCTTCCGACTCGTTCTCCTTTCCCGAGTTTCCGCTCTGAAGCCAGAGGTACTTGATGTGTGCGGGCTGGGCGCTGGTGGAAATCGAACCTCGTGGTATGTTCTGTAGGAACCTGAGGGAGCTAACTGAAGCCTAGCTCCTGCTGCGCTTGCGGCGCAGTCTACCTTAGAGCTGCTTGATTATCAACGCACACATTTTCGTGGAGAAGTCTCGTGTGTATATTCAGCCATGGCACAACTCCAGGCACGTTTCTACAGCGAGAACAAGAAATACGCAGTGGATGATGTCCCTTTCTCAATCCCTGCCGCTGCTGAAGTTGCGGACCTTAGTAACATTATCAATAAGTTGCTGGAGACCAAAAATGaactccacAAGCATGTCGAGTTTGATTTCCTTATCAAGGGCCAGTTTCTTCGAGTGCCCTTGGTCAAACACATGGAACTGGAGAACATTTCATCGGAAGAGGTTGTGGAACTAGAATATGTGGAAAAGTACACCGCACCCCAGCCAGAGCAGTGCATGTTCCATGATGACTGGATCAGCTCAATTGAAGGGGCAGAAGAATGGATCCTGTCTGGTTCTTATGATAAGACTTCTCGGATCTGGTCCTTGGAAGGAAAGTCGATAATGACAATTGTGGGACATACAGATGTTGTGAAAGATGTGGCTTGGGTGAAAAAAGACAGTTTGTCCTGCTTACTACTGACGGCCTCGATGGACCAGACTGTTCTCTTATGGGAGTGGAATGTAGAGAAGAACAAAGTGAAAGCTCTGCACTGCTGCCGAGGGCATGCTGGGAGTGTGGACGCCATCGCAGTCGATAGCTCGGGAGCTAAGTTTTGCAGTGGCTCCTGGGATAAGATGCTAAAGATCTGGTCTAcagTCCCTACAGATGAAGAAGATGAAATGGAAGAAGCCACAAATCGaccaagaaaaaagcaaaaaacagaaCAATTGGGACTAACAAGAACACCCTTGGTGACCCTCTCTGGCCACACAGAAGCAATTTCCTCAGTCCTTTGGTCAGACGCTGAAGAAATCTGTAGTGCATCTTGGGATCACACAATTAGAGTGTGGGATGTTGAGTCTGGCGGTCTTAAGTCAACTCTGacaggAAATAAAGTGTTTAATTGTATTTCCTATTCTCCCCTTTGTAAACGTTTGGCATCTGGAAGCACAGACAGGCATATTAGACTGTGGGATCCCCGAACTAAAGATGGTTCTTTGGTGTCGCTGTCTCTCACCTCACACACAGGCTGGGTGACATCAGTGAAGTGGTCTCCTACCCATGAACAGCAGCTCATCTCGGGCTCTTTAGATAACATTGTGAAGCTATGGGATACAAGAAGCTGTAAGGCTCCTCTCTACGATCTAGCTGCTCATGAAGACAAAGTTCTAAGTGTGGACTGGACAGACACAGGGCTACTTCTGAGTGGAGGAGCAGACAATAAATTGTATTCCTACAGCTATTCCCCTACCACTTCCCATGTGGGGGCTTGaaaatgaatggctgagaagagacTTCCTTGTTGGGTCTTGTCTTAATTCTTAGTGTCTCACTGTTATTTCATAAACTGAATCAAATTTGAGAGAGGACTTATAGTACAGCTCagctggtagaatgcttgcctaaaatGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAaatgggcatggtagcacattcctgtaatcccagtcctaGAGGTTGGAAGCAAGagcatcagaaattcaaggtcaccctctgctGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCTGTCTccataagaaagaaatcaatggaTAATCCTCTGATATCATTGTCAATGCAGAGACAGGAAGCAGCCTTTTAAAATTTGGATAACAGTTCATCTTTCATAATAGCAACATTTTACTGTCTTTGTCCTTCGTGCTTATAAAATACAGTAAGTATGTGGTCTGAATTCTGTCTACATTTTACCCTATGTAGACTCCTAAAACTTGAATTTCAGAAAGTATACTTTTTAAAGGGATATAGTACAAATGtagtaaatttgtttttttttgtctttttgttttgttttagtttgactTTTTAGTTAGCTATTTGAAGAGAAACATCTAGAAAAGACTAATAATGCTATAGGAGCCAGGCATCATAGCACACACTTATAACCCTAGCATTTAAGAAGTAGAAGCAAAAGGCTTGGGACTTGAGTAGGATTGGCTTCATAACTAGTTCAAGTCAGGAGCAGGATGAGACTCGGtctcaaataaagaaaatgaaaacttataGGAGGGTCATcaaaatggctcagtgactaaagatgcttgctgccaattCTGATAGcgtgagttcagttctcaggtctgaactcctgcaagctgtccttttccccacacacatgcacacatactgtgGCATGCATACAACTAAcctgtaaataaatttaaagaaaaaagaagtttatAAAAGTATGGGGAAAACAGTCATCTAACATTAAAAGCAAAtagtaaaaaacaacaacaacaaaacaccacacACTAAAAGGTAGTGTGTATAAGAAAATAAGACTGTTGAGTGTTCAGAGCATTAAAACAATGTAGATGTTAATTTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTcacatctttaatgccagcacctgggaagcaggtggatgtctgtgggttcaaggatagcctggtgagtttcaggacagccagggataaacagagagaccctgactcaaacgcaataaaaaaaaaaaatagtctttccTGA
>NM_001199061.1
ACATGGTCTCGGCCGAATTTGGCTGTTGGAACAGTGCACACAAGACGAACAGATGGGACCTTTGTCACTCAGAATAAAGAAGCAGGAAGTGTACTTGATGTGTGCGGGCTGGGCGCTGGTGGAAATCGAACCTCGTGGTATGTTCTGTAGGAACCTGAGGGAGCTAACTGAAGCCTAGCTCCTGCTGCGCTTGCGGCGCAGTCTACCTTAGAGCTGCTTGATTATCAACGCACACATTTTCGTGGAGAAGTCTCGTGTGTATATTCAGCCATGGCACAACTCCAGGCACGTTTCTACAGCGAGAACAAGAAATACGCAGTGGATGATGTCCCTTTCTCAATCCCTGCCGCTGCTGAAGTTGCGGACCTTAGTAACATTATCAATAAGTTGCTGGAGACCAAAAATGaactccacAAGCATGTCGAGTTTGATTTCCTTATCAAGGGCCAGTTTCTTCGAGTGCCCTTGGTCAAACACATGGAACTGGAGAACATTTCATCGGAAGAGGTTGTGGAACTAGAATATGTGGAAAAGTACACCGCACCCCAGCCAGAGCAGTGCATGTTCCATGATGACTGGATCAGCTCAATTGAAGGGGCAGAAGAATGGATCCTGTCTGGTTCTTATGATAAGACTTCTCGGATCTGGTCCTTGGAAGGAAAGTCGATAATGACAATTGTGGGACATACAGATGTTGTGAAAGATGTGGCTTGGGTGAAAAAAGACAGTTTGTCCTGCTTACTACTGACGGCCTCGATGGACCAGACTGTTCTCTTATGGGAGTGGAATGTAGAGAAGAACAAAGTGAAAGCTCTGCACTGCTGCCGAGGGCATGCTGGGAGTGTGGACGCCATCGCAGTCGATAGCTCGGGAGCTAAGTTTTGCAGTGGCTCCTGGGATAAGATGCTAAAGATCTGGTCTAcagTCCCTACAGATGAAGAAGATGAAATGGAAGAAGCCACAAATCGaccaagaaaaaagcaaaaaacagaaCAATTGGGACTAACAAGAACACCCTTGGTGACCCTCTCTGGCCACACAGAAGCAATTTCCTCAGTCCTTTGGTCAGACGCTGAAGAAATCTGTAGTGCATCTTGGGATCACACAATTAGAGTGTGGGATGTTGAGTCTGGCGGTCTTAAGTCAACTCTGacaggAAATAAAGTGTTTAATTGTATTTCCTATTCTCCCCTTTGTAAACGTTTGGCATCTGGAAGCACAGACAGGCATATTAGACTGTGGGATCCCCGAACTAAAGATGGTTCTTTGGTGTCGCTGTCTCTCACCTCACACACAGGCTGGGTGACATCAGTGAAGTGGTCTCCTACCCATGAACAGCAGCTCATCTCGGGCTCTTTAGATAACATTGTGAAGCTATGGGATACAAGAAGCTGTAAGGCTCCTCTCTACGATCTAGCTGCTCATGAAGACAAAGTTCTAAGTGTGGACTGGACAGACACAGGGCTACTTCTGAGTGGAGGAGCAGACAATAAATTGTATTCCTACAGCTATTCCCCTACCACTTCCCATGTGGGGGCTTGaaaatgaatggctgagaagagacTTCCTTGTTGGGTCTTGTCTTAATTCTTAGTGTCTCACTGTTATTTCATAAACTGAATCAAATTTGAGAGAGGACTTATAGTACAGCTCagctggtagaatgcttgcctaaaatGTGCACAGCCCTGCATGCTATCTCCAGCACTGCCCAAAGAAAaatgggcatggtagcacattcctgtaatcccagtcctaGAGGTTGGAAGCAAGagcatcagaaattcaaggtcaccctctgctGTATAGTGAGCTTAAAGGCAGCCAGCCATGGTTCCCTGAGTCTCTGTCTccataagaaagaaatcaatggaTAATCCTCTGATATCATTGTCAATGCAGAGACAGGAAGCAGCCTTTTAAAATTTGGATAACAGTTCATCTTTCATAATAGCAACATTTTACTGTCTTTGTCCTTCGTGCTTATAAAATACAGTAAGTATGTGGTCTGAATTCTGTCTACATTTTACCCTATGTAGACTCCTAAAACTTGAATTTCAGAAAGTATACTTTTTAAAGGGATATAGTACAAATGtagtaaatttgtttttttttgtctttttgttttgttttagtttgactTTTTAGTTAGCTATTTGAAGAGAAACATCTAGAAAAGACTAATAATGCTATAGGAGCCAGGCATCATAGCACACACTTATAACCCTAGCATTTAAGAAGTAGAAGCAAAAGGCTTGGGACTTGAGTAGGATTGGCTTCATAACTAGTTCAAGTCAGGAGCAGGATGAGACTCGGtctcaaataaagaaaatgaaaacttataGGAGGGTCATcaaaatggctcagtgactaaagatgcttgctgccaattCTGATAGcgtgagttcagttctcaggtctgaactcctgcaagctgtccttttccccacacacatgcacacatactgtgGCATGCATACAACTAAcctgtaaataaatttaaagaaaaaagaagtttatAAAAGTATGGGGAAAACAGTCATCTAACATTAAAAGCAAAtagtaaaaaacaacaacaacaaaacaccacacACTAAAAGGTAGTGTGTATAAGAAAATAAGACTGTTGAGTGTTCAGAGCATTAAAACAATGTAGATGTTAATTTGTCCATTCATTGAGCAGCAGGGCAGTGATGGTTcacatctttaatgccagcacctgggaagcaggtggatgtctgtgggttcaaggatagcctggtgagtttcaggacagccagggataaacagagagaccctgactcaaacgcaataaaaaaaaaaaatagtctttccTGA