Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl35a
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L35A
Also known as 2810431L15Rik|Rpl35
Coordinate chr16:32876823-32880559
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation; rRNA processing; and ribosomal large subunit biogenesis. Located in mitochondrion. Is expressed in alimentary system; central nervous system; cranium; and inner ear. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 5. Orthologous to human RPL35A (ribosomal protein L35a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl35a

Retroname Coord Strand Genomic Region ENSG
Rpl35aP2 chr1:181069508-181069947 - Intergenic
ENSMUSG00000081214 UCSC
Rpl35aP33 chr12:31797316-31797600 + Intragenic
ENSMUSG00000112033 UCSC
Rpl35aP38 chr13:6712553-6713010 - Intergenic
ENSMUSG00000068324 UCSC
Rpl35aP40 chr14:65076492-65076911 + Intragenic
ENSMUSG00000098837 UCSC
Rpl35aP46 chr16:22062842-22063268 + Intergenic
ENSMUSG00000116761 UCSC
Rpl35aP3 chr2:108705236-108705659 - Intergenic
ENSMUSG00000083424 UCSC
Rpl35aP26 chr9:90103301-90103751 - Intragenic
ENSMUSG00000081520 UCSC
Rpl35aP34 chr12:5016501-5016657 - Intragenic
N/A UCSC
Rpl35aP44 chr15:93191828-93192080 - Intragenic
Intragenic
N/A UCSC
Rpl35aP1 chr1:171915996-171916375 + Intragenic
ENSMUSG00000102779 UCSC
Rpl35aP29 chr10:62597458-62597887 + Intragenic
ENSMUSG00000112173 UCSC
Rpl35aP31 chr11:73116707-73117162 - Intergenic
ENSMUSG00000082405 UCSC
Rpl35aP32 chr11:88323768-88324401 - Intragenic
ENSMUSG00000084411 UCSC
Rpl35aP35 chr12:85709155-85709668 + Intergenic
ENSMUSG00000113249 UCSC
Rpl35aP37 chr13:63594702-63595086 - Intragenic
ENSMUSG00000089868 UCSC
Rpl35aP36 chr13:100906910-100907199 + Intragenic
ENSMUSG00000085340 UCSC
Rpl35aP39 chr14:34941065-34941258 - Intragenic
ENSMUSG00000115826 UCSC
Rpl35aP42 chr14:99603073-99603514 - Intergenic
ENSMUSG00000115746 UCSC
Rpl35aP43 chr15:65559634-65560061 - Intergenic
ENSMUSG00000115402 UCSC
Rpl35aP49 chr16:8739885-8740306 - Intergenic
ENSMUSG00000068674 UCSC
Rpl35aP48 chr16:35740775-35741206 + Intergenic
ENSMUSG00000062279 UCSC
Rpl35aP50 chr17:29355910-29356339 - Intragenic
ENSMUSG00000067575 UCSC
Rpl35aP51 chr17:85906919-85907321 + Intergenic
ENSMUSG00000098438 UCSC
Rpl35aP5 chr2:143723054-143723455 + Intergenic
ENSMUSG00000080711 UCSC
Rpl35aP6 chr2:157363571-157364009 - Intergenic
ENSMUSG00000081740 UCSC
Rpl35aP13 chr4:8456135-8456549 - Intergenic
ENSMUSG00000082151 UCSC
Rpl35aP11 chr4:15969544-15969984 - Intragenic
ENSMUSG00000084190 UCSC
Rpl35aP10 chr4:147978069-147978258 + Intragenic
ENSMUSG00000083340 UCSC
Rpl35aP16 chr5:33233323-33233755 + Intergenic
ENSMUSG00000093885 UCSC
Rpl35aP17 chr5:59669251-59669508 + Intergenic
ENSMUSG00000105038 UCSC
Rpl35aP14 chr5:122391011-122391647 + Intragenic
ENSMUSG00000082645 UCSC
Rpl35aP15 chr5:123393517-123393937 - Intragenic
ENSMUSG00000094664 UCSC
Rpl35aP19 chr6:47792189-47792627 - Intragenic
ENSMUSG00000094557 UCSC
Rpl35aP20 chr6:48500390-48500819 + Intergenic
ENSMUSG00000095526 UCSC
Rpl35aP18 chr6:113541788-113541958 - Intragenic
ENSMUSG00000107786 UCSC
Rpl35aP23 chr7:33875075-33875505 + Intergenic
ENSMUSG00000081491 UCSC
Rpl35aP21 chr7:126405371-126405580 + Intragenic
ENSMUSG00000108423 UCSC
Rpl35aP53 chrX:140410896-140411118 + Intragenic
ENSMUSG00000081217 UCSC
Rpl35aP54 chrX:143103876-143104310 - Intragenic
ENSMUSG00000080922 UCSC
Rpl35aP4 chr2:126752296-126752724 + Intragenic
N/A UCSC
Rpl35aP7 chr2:85099496-85099716 - Intergenic
N/A UCSC
Rpl35aP8 chr3:65696153-65696292 - Intragenic
N/A UCSC
Rpl35aP9 chr4:116379509-116379736 + Intragenic
N/A UCSC
Rpl35aP22 chr7:128773728-128773908 + Intergenic
N/A UCSC
Rpl35aP24 chr7:83355218-83355466 + Intragenic
N/A UCSC
Rpl35aP27 chr10:3218329-3218771 - Intergenic
N/A UCSC
Rpl35aP28 chr10:44427392-44427552 + Intergenic
N/A UCSC
Rpl35aP45 chr15:99033542-99033976 - Intergenic
N/A UCSC
Rpl35aP47 chr16:32161149-32161396 - Intragenic
N/A UCSC
Rpl35aP52 chr19:12502059-12502489 + Intergenic
N/A UCSC
Rpl35aP30 chr10:67184445-67184665 - Intergenic
ENSMUSG00000111908 UCSC
Rpl35aP12 chr4:63485606-63485897 - Intragenic
ENSMUSG00000083943 UCSC
Rpl35aP25 chr9:82407006-82407338 + Intragenic
ENSMUSG00000098420 UCSC
Rpl35aP41 chr14:75024932-75025106 + Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001130484.1
CTCTTTCCGCCATCTTGGCGCCTGTGGAGGTGAGGGGGGTTCCTGCTGCTGAGCTTTGGGGCCCGATTGCTGGGGCCTGCTGGGAACAGGACTTCTAACAGCAAGTATGTCTGGAAGGCTGTGGTGCAAGGCCATTTTTGCTGGCTACAAGCGAGGTCTCCGGAACCAAAGAGAGCACACGGCTCTTCTTAAAATTGAAGGCGTTTATGCCCGAGATGAAACGGAGTTCTACTTAGGCAAgagatgtgcttatgtgtataagGCAAAAAACAATACAGTGACTCCTGGAggtaaaccaaacaaaaccagagtgaTCTGGGGAAAGGTAACTCGGGCCCACGGAAACAGCGGTATGGTTCGTGCCAAATTCCGAAGCAACCTTCCTGCAAAGGCCATTGGACACAGAATCCGTGTGATGCTGTACCCATCCCGGATTTAAACTAatggagagtaaataaataaaagtagatttgtgctcttgtatttttttttcacatctgtCCTAAA
>NM_001130485.1
CACAAGGCCGCGCGGCGGGGCTTGCCTTCCTCTTTCCGCCATCTTGGCGCCTGTGGAGGCCTGCTGGGAACAGGACTTCTAACAGCAAGTATGTCTGGAAGGCTGTGGTGCAAGGCCATTTTTGCTGGCTACAAGCGAGGTCTCCGGAACCAAAGAGAGCACACGGCTCTTCTTAAAATTGAAGGCGTTTATGCCCGAGATGAAACGGAGTTCTACTTAGGCAAgagatgtgcttatgtgtataagGCAAAAAACAATACAGTGACTCCTGGAggtaaaccaaacaaaaccagagtgaTCTGGGGAAAGGTAACTCGGGCCCACGGAAACAGCGGTATGGTTCGTGCCAAATTCCGAAGCAACCTTCCTGCAAAGGCCATTGGACACAGAATCCGTGTGATGCTGTACCCATCCCGGATTTAAACTAatggagagtaaataaataaaagtagatttgtgctcttgtatttttttttcacatctgtCCTAAA
>NM_021338.3
AGGGGGGTTCCTGCTGCTGAGCTTTGGGGCCCGATTGCTGGGGTGCGTTTAGTTTCATCCCTCACCGAGACAACCTGGCGTCTCGGAGAACCCGACCGCCAGAGGCCTGCTGGGAACAGGACTTCTAACAGCAAGTATGTCTGGAAGGCTGTGGTGCAAGGCCATTTTTGCTGGCTACAAGCGAGGTCTCCGGAACCAAAGAGAGCACACGGCTCTTCTTAAAATTGAAGGCGTTTATGCCCGAGATGAAACGGAGTTCTACTTAGGCAAgagatgtgcttatgtgtataagGCAAAAAACAATACAGTGACTCCTGGAggtaaaccaaacaaaaccagagtgaTCTGGGGAAAGGTAACTCGGGCCCACGGAAACAGCGGTATGGTTCGTGCCAAATTCCGAAGCAACCTTCCTGCAAAGGCCATTGGACACAGAATCCGTGTGATGCTGTACCCATCCCGGATTTAAACTAatggagagtaaataaataaaagtagatttgtgctcttgtatttttttttcacatctgtCCTAAA