Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl35a
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L35A
Also known as Rpl35al1
Coordinate chr11:70963223-70967146
Strand -
Gene summary Enables ribonucleoprotein complex binding activity. Predicted to be involved in rRNA processing and ribosomal large subunit biogenesis. Part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 5. Orthologous to human RPL35A (ribosomal protein L35a). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl35a

Retroname Coord Strand Genomic Region ENSG
LOC100359498P3 chr1:257618571-257618944 - Intragenic
N/A UCSC
LOC100359498P6 chr1:50745465-50745841 + Intergenic
N/A UCSC
LOC100359498P18 chr3:110973002-110973289 + Intergenic
N/A UCSC
LOC100359498P34 chr6:135139208-135139659 + Intergenic
N/A UCSC
LOC100359498P36 chr6:29062128-29062352 - Intragenic
N/A UCSC
LOC100359498P41 chr7:12361217-12361649 - Intergenic
N/A UCSC
LOC100359498P42 chr7:134516793-134517243 - Intragenic
N/A UCSC
LOC100359498P44 chr8:70784669-70785095 - Intergenic
N/A UCSC
LOC100359498P48 chr9:93386747-93386949 + Intergenic
N/A UCSC
LOC100359498P56 chr10:92315357-92315724 - Intragenic
N/A UCSC
LOC100359498P64 chr14:78646616-78647001 + Intragenic
N/A UCSC
LOC100359498P67 chr15:27537743-27538101 - Intergenic
N/A UCSC
LOC100359498P70 chr17:11037361-11037831 - Intergenic
N/A UCSC
LOC100359498P74 chrX:113532945-113533281 - Intergenic
N/A UCSC
LOC100359498P78 chrX:44091668-44092125 - Intergenic
N/A UCSC
LOC100359498P1 chr1:142139910-142140326 - Intergenic
N/A UCSC
LOC100359498P2 chr1:219395245-219395686 - Intergenic
N/A UCSC
LOC100359498P7 chr1:57590734-57591292 + Intergenic
N/A UCSC
LOC100359498P8 chr2:140545243-140545693 - Intragenic
N/A UCSC
LOC100359498P9 chr2:157567095-157567388 - Intragenic
N/A UCSC
LOC100359498P10 chr2:170644062-170644489 - Intergenic
N/A UCSC
LOC100359498P11 chr2:190029904-190030223 - Intergenic
N/A UCSC
LOC100359498P12 chr2:206579751-206580143 - Intragenic
N/A UCSC
LOC100359498P14 chr2:240676816-240677270 - Intragenic
N/A UCSC
LOC100359498P15 chr2:31856524-31856973 + Intergenic
N/A UCSC
LOC100359498P16 chr2:63512182-63512603 - Intergenic
N/A UCSC
LOC100359498P19 chr3:149889478-149890047 + Intragenic
N/A UCSC
LOC100359498P20 chr3:176727373-176727796 + Intergenic
N/A UCSC
LOC100359498P21 chr3:94851454-94851787 - Intragenic
N/A UCSC
LOC100359498P23 chr4:128402051-128402445 + Intergenic
N/A UCSC
LOC100359498P26 chr4:152917465-152917867 - Intragenic
N/A UCSC
LOC100359498P27 chr4:183699452-183699898 - Intergenic
N/A UCSC
LOC100359498P28 chr5:139527725-139528284 - Intergenic
N/A UCSC
LOC100359498P29 chr5:144925894-144926266 + Intragenic
N/A UCSC
LOC100359498P30 chr5:147615672-147616043 - Intergenic
N/A UCSC
LOC100359498P31 chr5:151870044-151870499 + Intergenic
N/A UCSC
LOC100359498P32 chr5:164923238-164923687 + Intragenic
N/A UCSC
LOC100359498P33 chr6:104458564-104458710 - Intragenic
N/A UCSC
LOC100359498P35 chr6:23462939-23463391 - Intragenic
N/A UCSC
LOC100359498P37 chr6:51051376-51051732 + Intragenic
N/A UCSC
LOC100359498P38 chr6:95826482-95826920 + Intergenic
N/A UCSC
LOC100359498P39 chr7:106398068-106398415 - Intergenic
N/A UCSC
LOC100359498P40 chr7:122843127-122843580 - Intragenic
N/A UCSC
LOC100359498P43 chr8:48985761-48986195 + Intragenic
N/A UCSC
LOC100359498P45 chr8:72806084-72806233 - Intergenic
N/A UCSC
LOC100359498P46 chr9:105114883-105115309 + Intergenic
N/A UCSC
LOC100359498P47 chr9:5186649-5187089 - Intergenic
N/A UCSC
LOC100359498P49 chr10:16094952-16095291 + Intergenic
N/A UCSC
LOC100359498P50 chr10:43522702-43522977 + Intragenic
N/A UCSC
LOC100359498P52 chr10:57062479-57063160 + Intragenic
N/A UCSC
LOC100359498P54 chr10:7272668-7273009 - Intergenic
N/A UCSC
LOC100359498P57 chr11:15218324-15218825 + Intergenic
N/A UCSC
LOC100359498P58 chr11:4194342-4194663 + Intragenic
N/A UCSC
LOC100359498P59 chr11:5561930-5562167 - Intergenic
N/A UCSC
LOC100359498P60 chr11:84342454-84342892 + Intragenic
N/A UCSC
LOC100359498P61 chr12:52626450-52626610 - Intragenic
N/A UCSC
LOC100359498P62 chr12:7186430-7186938 - Intergenic
N/A UCSC
LOC100359498P63 chr13:18756315-18756742 + Intergenic
N/A UCSC
LOC100359498P65 chr14:89367656-89368103 + Intergenic
N/A UCSC
LOC100359498P66 chr15:15625129-15625550 - Intragenic
N/A UCSC
LOC100359498P68 chr15:37930470-37930897 + Intergenic
N/A UCSC
LOC100359498P69 chr16:24877271-24877535 + Intergenic
N/A UCSC
LOC100359498P71 chr17:966626-967140 - Intergenic
N/A UCSC
LOC100359498P72 chr18:49129137-49129441 + Intergenic
N/A UCSC
LOC100359498P73 chr19:56640829-56641178 + Intergenic
N/A UCSC
LOC100359498P76 chrX:15849715-15850073 - Intergenic
N/A UCSC
LOC100359498P77 chrX:23312126-23312434 + Intergenic
N/A UCSC
LOC100359498P4 chr1:281850615-281851019 - Intragenic
N/A UCSC
LOC100359498P5 chr1:48017878-48018254 + Intragenic
N/A UCSC
LOC100359498P13 chr2:211114173-211114313 + Intragenic
N/A UCSC
LOC100359498P17 chr3:104905545-104905927 - Intragenic
N/A UCSC
LOC100359498P22 chr3:95939252-95939628 + Intragenic
N/A UCSC
LOC100359498P24 chr4:141693375-141693620 + Intergenic
N/A UCSC
LOC100359498P25 chr4:145522656-145522799 - Intragenic
N/A UCSC
LOC100359498P51 chr10:55736612-55736771 - Intergenic
N/A UCSC
LOC100359498P53 chr10:68588774-68589148 + Intragenic
N/A UCSC
LOC100359498P55 chr10:86652836-86653126 - Intragenic
N/A UCSC
LOC100359498P75 chrX:128315057-128315265 - Intergenic
N/A UCSC
LOC100359498P79 chrX:71576273-71576643 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>XM_002727895.5
GGCGTCTTTGGAGGTGAGGGGGAGTTTCTGCTGCTGAACTTTGAGGGCAGATTTCTAGGGCCTGCTGGGAACAGGACTTCTAAAAAAACAAGTATGTCTGGAAGGCTGTGGTGCAAGGCCATTTTTGCTGGCTACAAGCGAGGCCTCCGGAACCAAAGAGAGCACACGGCTCTTCTTAAAATTGAAGGTGTTTATGCCCGAGATGAAACTGAGTTCTACTTAGGCAAGAGGTGTGCTTATGTGTACAAAGCAAAAAACAATACAGTGACTCCTGGAGGCAAACCAAACAAAACCAGAGTGATCTGGGGAAAAGTAACTCGGGCCCATGGAAACAGTGGCATGGTTCGTGCCAAATTCCGAAGCAACCTTCCTGCAAAGGCCATTGGACACAGAATCCGTGTGATGCTGTACCCATCCCGGATTTAAACTAATGGAGAGTAAATAAATAAAAGTAGATTTGTGCTCTTGTATTTTTT
>XM_002727896.5
GGCGGGTCTTGCCTTCCTCTTTCCGCCATCTTGGCGTCTTTGGAGGCCTGCTGGGAACAGGACTTCTAAAAAAACAAGTATGTCTGGAAGGCTGTGGTGCAAGGCCATTTTTGCTGGCTACAAGCGAGGCCTCCGGAACCAAAGAGAGCACACGGCTCTTCTTAAAATTGAAGGTGTTTATGCCCGAGATGAAACTGAGTTCTACTTAGGCAAGAGGTGTGCTTATGTGTACAAAGCAAAAAACAATACAGTGACTCCTGGAGGCAAACCAAACAAAACCAGAGTGATCTGGGGAAAAGTAACTCGGGCCCATGGAAACAGTGGCATGGTTCGTGCCAAATTCCGAAGCAACCTTCCTGCAAAGGCCATTGGACACAGAATCCGTGTGATGCTGTACCCATCCCGGATTTAAACTAATGGAGAGTAAATAAATAAAAGTAGATTTGTGCTCTTGTATTTTTTTCA
>XM_017598170.1
CGCATCTGGGAGAATCTGACCGCCTGAGATTTCTGGGGGTTCCAGGAACATGGAGGGCGGGATGGAGGAGATGACGGACTGATGGTGTTGAGGCCCCGACCGGAGGAGAAATCGCTGGTCTCGGTTGATCTCCGGCTCCGGAGGAGTGAATGGGCCTGCTGGGAACAGGACTTCTAAAAAAACAAGTATGTCTGGAAGGCTGTGGTGCAAGGCCATTTTTGCTGGCTACAAGCGAGGCCTCCGGAACCAAAGAGAGCACACGGCTCTTCTTAAAATTGAAGGTGTTTATGCCCGAGATGAAACTGAGTTCTACTTAGGCAAGAGGTGTGCTTATGTGTACAAAGCAAAAAACAATACAGTGACTCCTGGAGGCAAACCAAACAAAACCAGAGTGATCTGGGGAAAAGTAACTCGGGCCCATGGAAACAGTGGCATGGTTCGTGCCAAATTCCGAAGCAACCTTCCTGCAAAGGCCATTGGACACAGAATCCGTGTGATGCTGTACCCATCCCGGATTTAAACTAATGGAGAGTAAATAAATAAAAGTAGATTTGTGCTCTTGTATTTTTT