Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name LSM2
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
Also known as C6orf28|G7B|YBL026W|snRNP
Coordinate chr6:31797396-31806966
Strand -
Gene summary This gene encodes a member of the LSm family of RNA-binding proteins. LSm proteins form stable heteromers that bind specifically to the 3'-terminal oligo(U) tract of U6 snRNA and may play a role in pre-mRNA splicing by mediating U4/U6 snRNP formation. Pseudogenes of this gene are located on the short arm of chromosomes 6 and 19. [provided by RefSeq, Nov 2011]

Retrocopy(s) from LSM2

Retroname Coord Strand Genomic Region ENSG
LSM2P3 chr19:10597999-10598977 - Intergenic
 ENSG00000271010 UCSC
LSM2P2 chr5:108893989-108894639 - Intragenic
 ENSG00000250441 UCSC
LSM2P1 chr4:48410678-48411354 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_021177.5
CTCCCCTCTACTCTACCCAGCTTGCGCTCCCCAGCCGCAAGTCGGCCGCGCTTTGCCCGTCAGCGCTTGGAGCTTTCTGCGTcgcttcccgctgcgcctgcgcggtcccgcctcgccccacgcgcgggctcgcgctTCGGTTTCCCCAGACCTGCTCGCAGCACCCTGCTGTCTTCCCGGTCCGGCCCGCTGCCCGCGGCGCCAGCACCATGCTCTTCTATTCTTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTGGAACTAAAGAATGACCTGAGCATCTGTGGAACCCTCCATTCTGTGGATCAGTATCTCAACATCAAACTAACTGACATCAGTGTCACAGACCCTGAGAAATACCCTCACATGTTATCAGTGAAGAACTGCTTCATTCGGGGCTCAGTGGTCCGATACGTGCAGCTGCCAGCAGATGAGGTCGACACACAGTTGCTACAGGATGCGGCAAGGAAGGAAGCCCTGCAGCAGAAACAGTGATGGCTCCTCCTCCTCTTCCCCTCCCTCTTTCATTGGTGACCCATAACCCCAAGTCCCAGCCCAGAACCCCTAACCCCCAATACTTGAAGGGGTTTTGTTTTTTTACTAATGATGGTTTTGTGGGTTTTTTTTAAGGGATGAGTGGATGAGAGGAGTAATAGGGAACAGCTATCCTCTCTTGAGAAGGGGAGGATAAGTAGGCTGGGAAACTTCAAAGCCTTCCCAGTCCCCAGCACCTGCCTTTCTCACTACTTCTCTGGAGATGGTAGGAGAGTTTCCTAGGTCTTTCCAGGGCAGCATGTGATTCATTTGGGGATGGAAGGAATCTGTCCCGCATCGGGAATAAAATTTATGATGCAAA
>NM_021177.5_2
CTCCCCTCTACTCTACCCAGCTTGCGCTCCCCAGCCGCAAGTCGGCCGCGCTTTGCCCGTCAGCGCTTGGAGCTTTCTGCGTcgcttcccgctgcgcctgcgcggtcccgcctcgccccacgcgcgggctcgcgctTCGGTTTCCCCAGACCTGCTCGCAGCACCCTGCTGTCTTCCCGGTCCGGCCCGCTGCCCGCGGCGCCAGCACCATGCTCTTCTATTCTTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTGGAACTAAAGAATGACCTGAGCATCTGTGGAACCCTCCATTCTGTGGATCAGTATCTCAACATCAAACTAACTGACATCAGTGTCACAGACCCTGAGAAATACCCTCACATGTTATCAGTGAAGAACTGCTTCATTCGGGGCTCAGTGGTCCGATACGTGCAGCTGCCAGCAGATGAGGTCGACACACAGTTGCTACAGGATGCGGCAAGGAAGGAAGCCCTGCAGCAGAAACAGTGATGGCTCCTCCTCCTCTTCCCCTCCCTCTTTCATTGGTGACCCATAACCCCAAGTCCCAGCCCAGAACCCCTAACCCCCAATACTTGAAGGGGTTTTGTTTTTTTACTAATGATGGTTTTGTGGGTTTTTTTTAAGGGATGAGTGGATGAGAGGAGTAATAGGGAACAGCTATCCTCTCTTGAGAAGGGGAGGATAAGTAGGCTGGGAAACTTCAAAGCCTTCCCAGTCCCCAGCACCTGCCTTTCTCACTACTTCTCTGGAGATGGTAGGAGAGTTTCCTAGGTCTTTCCAGGGCAGCATGTGATTCATTTGGGGATGGAAGGAATCTGTCCCGCATCGGGAATAAAATTTATGATGCAAA
>NM_021177.5_4
CTCCCCTCTACTCTACCCAGCTTGCGCTCCCCAGCCGCAAGTCGGCCGCGCTTTGCCCGTCAGCGCTTGGAGCTTTCTGCGTcgcttcccgctgcgcctgcgcggtcccgcctcgccccacgcgcgggctcgcgctTCGGTTTCCCCAGACCTGCTCGCAGCACCCTGCTGTCTTCCCGGTCCGGCCCGCTGCCCGCGGCGCCAGCACCATGCTCTTCTATTCTTTTTTCAAGTCCCTTGTGGGCAAGGATGTGGTCGTGGAACTAAAGAATGACCTGAGCATCTGTGGAACCCTCCATTCTGTGGATCAGTATCTCAACATCAAACTAACTGACATCAGTGTCACAGACCCTGAGAAATACCCTCACATGTTATCAGTGAAGAACTGCTTCATTCGGGGCTCAGTGGTCCGATACGTGCAGCTGCCAGCAGATGAGGTCGACACACAGTTGCTACAGGATGCGGCAAGGAAGGAAGCCCTGCAGCAGAAACAGTGATGGCTCCTCCTCCTCTTCCCCTCCCTCTTTCATTGGTGACCCATAACCCCAAGTCCCAGCCCAGAACCCCTAACCCCCAATACTTGAAGGGGTTTTGTTTTTTTACTAATGATGGTTTTGTGGGTTTTTTTTAAGGGATGAGTGGATGAGAGGAGTAATAGGGAACAGCTATCCTCTCTTGAGAAGGGGAGGATAAGTAGGCTGGGAAACTTCAAAGCCTTCCCAGTCCCCAGCACCTGCCTTTCTCACTACTTCTCTGGAGATGGTAGGAGAGTTTCCTAGGTCTTTCCAGGGCAGCATGTGATTCATTTGGGGATGGAAGGAATCTGTCCCGCATCGGGAATAAAATTTATGATGCAAA