RCPedia: Genes

Summary

Gene Name	Psmb4	Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie	Rattus norvegicus
Full Name	proteasome 20S subunit beta 4
Also known as	-
Coordinate	chr2:196043546-196046320
Strand	-
Gene summary	Predicted to enable lipopolysaccharide binding activity. Predicted to be involved in negative regulation of inflammatory response to antigenic stimulus and proteasomal protein catabolic process. Predicted to be located in ciliary basal body; mitochondrion; and nucleoplasm. Predicted to be part of proteasome core complex, beta-subunit complex. Predicted to be active in nucleus. Orthologous to human PSMB4 (proteasome 20S subunit beta 4). [provided by Alliance of Genome Resources, Apr 2022]

Retroname	Coord	Strand	Genomic Region	ENSG
Psmb4P1	chr8:108690148-108690723	+	Intergenic	N/A	UCSC

>NM_031629.2
CATTTTTTCGGCAGTGGTGACTAAGATGGAAGCGTTTTGGGAGTCACGGACTGGCCACTGGGCCGGGGGTCCGGCTCCGGGGCAGTTTTACCGCGTCCCGTCCACCCCCAGCTGCCTCATGGATCCGATGTCTGCGCCCTGCGAGGGTCCCATCACTCGGACCCAGAACCCCATGGTGACTGGGACATCCGTACTAGGGGTGAAGTTCGACTGCGGAGTGGTGATTGCTGCAGACATGCTGGGCTCCTACGGCTCCCTGGCTCGTTTCCGCAATATCTCTCGTATTATGCGAGTCAACGACAGCACTATGCTAGGTGCTTCAGGAGACTATGCTGATTTCCAGTATTTGAAGCAAGTTCTCGGCCAGATGGTGATTGATGAGGAGCTGTTGGGAGATGGACATAGCTATAGTCCTAGAGCTATCCATTCATGGTTGACAAGGGCCATGTACAGTCGCCGCTCCAAGATGAACCCTCTGTGGAACACCATGGTCATTGGAGGCTATGCTGGTGGAGAAAGCTTTCTTGGTTATGTGGACATGCTTGGTGTAGCTTATGAAGCCCCTTCACTAGCCACTGGTTATGGTGCATACTTGGCTCAGCCTCTGCTTCGAGAAGTTCTAGAGAAGCAACCGGTGCTGAGTCAGACAGAGGCCCGAGAGCTTGTGGAGCGCTGCATGCGAGTGCTGTACTACCGAGACGCTCGTTCGTATAACCGGTTTCAAGTTGCTACTGTAACTGAAAAAGGTGTGGAGATAGAAGGACCACTGTCAGCACAGACCAACTGGGACATTGCTCACATGATCAGTGGCTTTGAATGAAATCCAGATGAAGTGTCCAGAGTTGAAGCTTGGCCCTTGTGAACGTGACTGTAGCTGGCTCAAAGGCAGACTTTTGTAAAAATAAATCAGTCCTTTGAAGTGT