Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name H2az1
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name H2A.Z variant histone 1
Also known as H2A.Z-1|H2A/z|H2afz
Coordinate chr2:243105224-243107333
Strand +
Gene summary Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; RNA polymerase II core promoter sequence-specific DNA binding activity; and nucleosomal DNA binding activity. Involved in cellular response to insulin stimulus. Located in nucleus. Orthologous to human H2AZ1 (H2A.Z variant histone 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from H2az1

Retroname Coord Strand Genomic Region ENSG
H2afzP1 chr1:135041802-135042595 - Intergenic
N/A UCSC
H2afzP2 chr2:14438712-14439311 - Intergenic
N/A UCSC
H2afzP3 chr3:149997986-149998602 - Intragenic
N/A UCSC
H2afzP4 chr5:82145789-82146533 + Intragenic
N/A UCSC
H2afzP5 chr6:11859275-11860060 - Intergenic
N/A UCSC
H2afzP6 chr7:4767123-4767929 - Intergenic
N/A UCSC
H2afzP7 chr8:52294299-52294691 - Intergenic
N/A UCSC
H2afzP8 chr11:22854596-22855274 + Intergenic
N/A UCSC
H2afzP9 chr15:8609766-8610525 - Intergenic
N/A UCSC
H2afzP10 chr16:71438595-71439402 + Intergenic
N/A UCSC
H2afzP11 chrX:51418444-51418835 - Intragenic
N/A UCSC
H2afzP12 chrX:68674130-68674287 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_022674.1
GCCTCGTCTCTTCCTCGCTTGTCCGAGCTTCAGCACAGTCCGAGATGGCTGGCGGTAAGGCTGGAAAGGACTCCGGAAAGGCCAAGACAAAGGCGGTTTCCCGCTCCCAGCGAGCGGGCTTGCAGTTCCCTGTGGGCCGTATTCATCGACACCTGAAATCTAGGACAACAAGCCACGGACGTGTGGGCGCGACCGCAGCTGTGTACAGCGCAGCCATCCTGGAGTACCTCACCGCAGAGGTACTTGAGTTGGCAGGAAATGCATCAAAAGACTTGAAGGTAAAGCGTATTACCCCTCGTCACTTGCAACTTGCTATCCGCGGAGATGAAGAGTTGGACTCTCTGATCAAGGCTACGATTGCTGGTGGTGGTGTCATCCCACACATCCACAAATCACTGATTGGGAAGAAAGGACAACAGAAGACTGTCTAAGGATGCCTGGATTCCTTACTATCTCAGGACTCTAAATACTCTTAACAGCTGTCCAGTGTTGGTGATTCCAGTGGACTGTATCTCTGTGAAAAACACAATTTTGCCTTTTTGTAATTCTATTTGAGCAAGTTGGAGGCTTAATTAGCCTTCCAACCAACCAAATTTCTGCATTCGAGTCTTAACCATATTTAAGTGTTACTGTGGCTTCAAAGAAGCTATTGAATCTGAAGTGGTGGGTTTTGATTGAGTTGACTGTTTTTAAAAAACTGTTTGGATTTTAATTGTGATGCAGAAGTTATAGTAACAAACATTTGGTTTTGTACAGACATTATTTCCACTCTGGTGGATAAGCTCAATAAAGGTCAGATCCCAAACTA