Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Edf1
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name endothelial differentiation-related factor 1
Also known as 0610008L11Rik|MBF1
Coordinate chr2:25447838-25452096
Strand +
Gene summary Predicted to enable TFIID-class transcription factor complex binding activity and transcription coactivator activity. Predicted to be involved in positive regulation of DNA binding activity. Predicted to act upstream of or within cell differentiation. Predicted to be located in cytosol; nucleolus; and nucleoplasm. Predicted to be active in nucleus. Is expressed in several structures, including central nervous system; genitourinary system; heart; liver; and retina. Orthologous to human EDF1 (endothelial differentiation related factor 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Edf1

Retroname Coord Strand Genomic Region ENSG
Edf1P2 chr11:5584061-5584749 + Intergenic
 ENSMUSG00000081021 UCSC
Edf1P3 chr11:61864628-61865173 - Intragenic
 ENSMUSG00000083212 UCSC
Edf1P1 chr9:27931792-27932143 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_021519.2
GCGCTGGCGCCGGAAGCGGGGAGGCGACGAAGGGACGTCGCGTCGCCGCGCCGGGTCTCGAGCAGCTGCCAGAGCCGCCGGACGGATCGCTGCCCCCGCCGCGCCATGGCCGAGAGTGACTGGGACACCGTGACGGTGCTGCGCAAGAAGGGCCCCACGGCCGCACAGGCCAAGTCTAAGCAGGCCATCTTAGCGGCTCAGCGACGAGGAGAAGATGTGGAGACATCCAAGAAATGGGCTGCTGGCCAGAACAAGCAGCATTCCATTACTAAAAACACAGCCAAGCTCGACCGGGAGACCGAGGAGCTGCATCACGACAGGGTGACCCTGGAGGTGGGCAAAGTGATCCAGCGGGGCCGGCAGAGCAAAGGCCTGACCCAGAAGGACCTGGCCACGAAAATCAATGAGAAGCCGCAAGTCATCGCAGACTATGAAAGTGGACGGGCCATTCCGAATAACCAGGTTTTGGGCAAAATTGAGAGAGCCATCGGCCTCAAGCTCCGGGGGAAGGACATCGGGAAGCCTATCGAGAAGGGGCCGAAGGCGAAATGAACACAAAGCCTCGAAGCCAGTGGTTCCGGCTGAGCTCTCCTGGCTGGTcccccaggaccaccagcactGCCGTGGGTCTCCTCACATGGTCAAACGGAACACGGGGGGTTAGGCCTGTGTGCCCCCTCAACCCATAACTGCTGTCAAACAAAGCAAACCTTGTAAAGTGATA