Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Nsa2
Plot displaying the genomic locations of a parental gene (in chr13) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name NSA2 ribosome biogenesis homolog
Also known as 5730427N09Rik|LNR42|Nsa2p|Tinp1|Yr29
Coordinate chr13:97265935-97274434
Strand -
Gene summary Predicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleus. Predicted to be part of preribosome, large subunit precursor. Is expressed in several structures, including branchial arch; extraembryonic ectoderm; neural ectoderm; and trunk mesenchyme. Orthologous to human NSA2 (NSA2 ribosome biogenesis factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nsa2

Retroname Coord Strand Genomic Region ENSG
Nsa2P3 chr1:25050911-25051843 + Intergenic
ENSMUSG00000100450 UCSC
Nsa2P14 chr10:111925140-111926458 - Intragenic
ENSMUSG00000090162 UCSC
Nsa2P15 chr11:11386886-11387939 + Intragenic
ENSMUSG00000081325 UCSC
Nsa2P16 chr12:92186077-92186926 + Intergenic
ENSMUSG00000114085 UCSC
Nsa2P17 chr13:77701505-77702602 - Intragenic
ENSMUSG00000114778 UCSC
Nsa2P19 chr14:7809887-7810666 - Intergenic
ENSMUSG00000114628 UCSC
Nsa2P18 chr14:35269917-35271162 - Intragenic
ENSMUSG00000115277 UCSC
Nsa2P20 chr15:13452278-13453369 + Intergenic
ENSMUSG00000115481 UCSC
Nsa2P21 chr16:62421633-62423021 + Intergenic
ENSMUSG00000116962 UCSC
Nsa2P22 chr17:25923928-25924829 + Intergenic
ENSMUSG00000117657 UCSC
Nsa2P23 chr17:69877260-69878346 + Intergenic
ENSMUSG00000117071 UCSC
Nsa2P24 chr18:12875402-12876402 - Intragenic
ENSMUSG00000083332 UCSC
Nsa2P25 chr18:64213329-64214602 - Intergenic
ENSMUSG00000117673 UCSC
Nsa2P26 chr19:22418378-22421017 + Intragenic
ENSMUSG00000118353 UCSC
Nsa2P4 chr2:18763705-18764739 + Intergenic
ENSMUSG00000081139 UCSC
Nsa2P5 chr4:148115926-148116925 + Intragenic
ENSMUSG00000083473 UCSC
Nsa2P6 chr5:145953610-145954739 - Intergenic
ENSMUSG00000104895 UCSC
Nsa2P7 chr6:18156166-18157239 - Intergenic
ENSMUSG00000082289 UCSC
Nsa2P8 chr7:65776670-65777531 - Intragenic
Intragenic
ENSMUSG00000108699 UCSC
Nsa2P9 chr8:11788766-11789411 + Intragenic
Intragenic
ENSMUSG00000110394 UCSC
Nsa2P11 chr9:14604732-14605234 + Intergenic
ENSMUSG00000111483 UCSC
Nsa2P12 chr9:44575032-44576122 - Intergenic
ENSMUSG00000111326 UCSC
Nsa2P13 chr9:57235785-57236609 - Intergenic
ENSMUSG00000111457 UCSC
Nsa2P30 chrX:89106561-89107607 + Intergenic
ENSMUSG00000083508 UCSC
Nsa2P31 chrX:96091153-96091964 - Intergenic
ENSMUSG00000083350 UCSC
Nsa2P27 chrX:134516737-134517519 + Intragenic
ENSMUSG00000082602 UCSC
Nsa2P28 chrX:135228938-135230587 + Intergenic
ENSMUSG00000083470 UCSC
Nsa2P29 chrX:150196500-150197557 - Intragenic
ENSMUSG00000084166 UCSC
Nsa2P1 chr1:185229582-185230174 + Intergenic
N/A UCSC
Nsa2P2 chr1:194878978-194879544 + Intergenic
N/A UCSC
Nsa2P10 chr9:103922827-103923758 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_021552.5
AGACGTCACGGAACTGCTGTGCGGCGCTTGCGCTCCACTCGGCCTTCTTAAAGGACTACCCTTTCCCGTCCTGGGCTGAACGAGGCAGGCTCGTGGACCAGTGACATCCAGAAATTAAGAGTTTTTTGAGACCCGGGAGGTCGCGGACCGGTGCTCCGCGGCTGTCATCATGCCACAAAATGAATATATTGAATTGCACCGCAAACGATACGGATATCGTTTGGACTaccatgagaaaaagagaaagaaagaaggtcgGGAGGCCCATGAACGTTCAAAGAAGGCAAAAAAAATGATTGGCCTGAAGGCTAAGCTCTACCATAAACAGCGCCATGCcgagaaaatacaaatgaaaaagacTATTAAGATGCATGAGAAGAGAAACACCAAGCAGAAGGATGATGAGAAGACGCCGCAGGGAGCAGTCCCTGCCTATCTGCTGGACAGAGAGGGCCAGTCGAGAGCAAAAGTCCTTTCTAACATGATTAAGCAGAAACGGAAAGAAAAGGCGGGAAAATGGGAGGTCCCTCTACCCAAAGTTCGTGCCCAAGGAGAAACAGAAGTATTGAAAGTTATTCggacaggaaaaaggaaaaagaaggcatGGAAGAGAATGGTTACTAAAGTCTGTTTTGTTGGCGATGGCTTTACAAGAAAACCACCGAAATATGAAAGGTTCATTAGGCCCATGGGTCTacgtttcaaaaaagcccatgtCACACACCCTGAGCTGAAAGCTACCTTTTGCCTGCCTATTCTCGGTGTGAAAAAGAATCCATCGTCCCCATTATATACAACCCTGGGTGTGATCACCAAAGGTACAGTTATTGAAGTGAATGTGAGCGAGCTGGGCCTTGTGACACAAGGAGGCAAGGTGATTTGGGGAAAGTACGCCCAAGTTACCAACAATCCTGAGAACGATGGGTGCATAAATGCGGTCTTGCTGGTCTGACAGTGACGTCACTCATACACGTCATTCCACTCACTGCTGAAGACCACACCCTGTCAGGAAAACACCGTCCCTGGGGTCTTTCTGAACCACCGAGCAGCCTTACCTCATGTGCAGTCATCAAGCATTTACTAAgttgtaaaggaaaataaaactgccCAGTTTGACAGTTGGTCTTTAGTTTGGGGCATAACGGTTTACATGTTAATAAAATTTAGTGACTGAGTAGCCAAGGACACAGAAGCATACTAAAAACTATGTATGCAGCAATACAAGTCTGTCACAATTGAAAAGCCATCAGAATAGTTGAAAGTTCCTGTAAAGGTCAAGTATTTTCCATTGTGTTGCCATTAATCCtaaaatgtggaacattttaaACACATGGTAGTGTTTAAATTCATAAACAAGTAGATTAAAAGTCATAGAGAAGGTAAATTAGATGAAAAGAGTGCACAATTCAGTGCTTTCACTCATAACTAATACCTTATATAGTACTGCAGTGACCTCCAGTGTACTTCCTCCATTTCCTATATTCTAAAAATAGGGAGCTCGCTCACTACTGCTACAACAATGTGAACAATTGGGTTAGATAATTCTCCACCATGTACCAGTGACTTGAGATGTGGCAATTAATTAGATTGAAAGGTCATGATTTGGGGTTATAACTTAAATCCACGTTCTTAAGAGTGTCTGTATATTAATCTGTAATCACCATATtgctttaaattgtttattttttaaatctactttcATAATACAGGCAGTGTGATTAGCTGTGCCTTTAACAGAATCATTCAATGTCTAATATCTAAGCACATCTTCATGAATGCAACTCAGAggaaaggaaatttaaaacacaagactagaaaacaatcacaaaacacaagtttaattactattttaaacattaagggggaaaaaaaaaccctagcaaagaaacaaaccataAGTTCTCCATAAGACTTGgtattctgaatattttttttaaagtttttagaaCATACAAAGATATTAAAGGAAAAGGCGGGCCTAGTTCCTTGGAAAGGACTGACCAGGAAAGGCAGAGTGACTTCACTTTCTTATAATTAGATTTTAACATTGTCTACCAATCAGAACGGGCAATGTGTATTTATCTGCCTGAGTTACGGTGAAAGGAAGCCTGACTCCAGGTGATCAGTGGCTATTGCTGAAgtacatttgcttatttttttttttaggattgaAACTAGCAAACTGTCGTATACTAAAAAGTCATGGGAGGAAGTATTAAAACAAGCATGACTTCTGTAACAGACCACGCCCAGAACCACCAGATTGCAAATGGACATCAAAGCAAAAGCTGCTCTCTTCAAATAGTTACATGAGTAGTATTAGTACAAATTCCTTATTTACATCAAAATCTGTTTCAGTTTGCTGGTGTGACCACAGCTTAGGTAATTCCAAAGGAGAAGCAACTTCAGAGATGTTTAGTTGGTAGAAGGGCTTAAAGGTCTACTAAAGTCACAAACCACTAGGTAACACTACACTGGTCACCTGTTCAAAGTAGACCATTAGTGACTAGAAGTCCTCCTTAGCCTCTGCAAATCAACGgtaaaaggaaagtagacacaaagtGGAAGAATGTGAACACACAGAGAAGACTGACATTCTAAGTCATgccatttgattttattttaaaaaatcataatagaatctctttaaaagttttaaaggaGCTTtacaataaaattcttaaat