Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Stx8
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name syntaxin 8
Also known as -
Coordinate chr10:54512922-54753302
Strand +
Gene summary Predicted to enable several functions, including SNAP receptor activity; chloride channel inhibitor activity; and ubiquitin protein ligase binding activity. Involved in endosome to lysosome transport and vesicle fusion. Located in late endosome membrane and lysosomal membrane. Part of SNARE complex. Orthologous to human STX8 (syntaxin 8). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Stx8

Retroname Coord Strand Genomic Region ENSG
Stx8P1 chr7:10062371-10063210 - Intergenic
N/A UCSC
Stx8P2 chr7:10629394-10630234 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_031656.2
AGCTGCAGGCGGAGACTGCACCATGGCCCCAGACCCCTGGTTCTCCACGTACGATTCTACTTGTCAGATTGCCCAAGAAATCGCTGAGAAGATTCAAGAACGAAATCAGTGTGAAAGAAGAGGTGAGAAGACACCTAAGCTTACCCTGACAATCAGAACTTTGTTGAAGAATCTGAAGGTAAAGATCGACCTCTTGAAGGACTTACTTCTAAGAGCTGTGTCGACGCGCCAGATAACACAACTGGAGGGGGATCGAAGACAGAACCTTCTGGATGATCTTGTCACCCGAGAGAGACTGCTCCTGGCATCGTTTAAGAATGAGGGTTCCGAGCCGGATTTGATCAGGTCCAGCCTGATGAGTGAAGAAGCAAAGCGAGGAACTCCCAACCCTTGGCTCTGTGAGGAGCCGGAGGAGACCAGAGGCTTGGGTTTCGATGAGATCCGGCAACAGCAGCAGAAAATTATTCAAGAACAGGACGCAGGTCTTGATGCCCTTTCCTCTATCATAAGTCGCCAAAAGCAAATGGGCCAGGAGATTGGGAATGAACTGGACGAACAGAACGAGATCATCGATGACCTTGCCAACCTGGTGGAGAACACAGATGAGAAGCTTCGCACTGAAGCCAGGCGAGTGACCCTGGTGGACAGAAAGTCAGCTTCCTGTGGGATGATAATGGTGATCTTATTGCTGCTCGTGGCTATTGTGGTGGTTGCAGTGTGGCCAACCAACTGATGGCAATAAGGGGACCACCCGCAGTGACACAGCCAACAATGAGTGAAAGCCCAGCACCCTTTTGGTACACAACACCTCCTCTCAATAAATTCTCCACGCTCCCGGC