Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RBM3
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name RNA binding motif protein 3
Also known as IS1-RNPL|RNPL
Coordinate chrX:48574484-48581162
Strand +
Gene summary This gene is a member of the glycine-rich RNA-binding protein family and encodes a protein with one RNA recognition motif (RRM) domain. Expression of this gene is induced by cold shock and low oxygen tension. A pseudogene exists on chromosome 1. Multiple alternatively spliced transcript variants that are predicted to encode different isoforms have been characterized although some of these variants fit nonsense-mediated decay (NMD) criteria. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RBM3

Retroname Coord Strand Genomic Region ENSG
RBM3P1 chr1:171761993-171763137 + Intergenic
ENSG00000236741 UCSC

Expression

Transcript Sequences

>NM_006743.5
ATCAATCGTCTTCCGGCGCAGCCCCGTCCCTGTTTTTTGTGCTCCTCCGAGCTCGCTGTTCGTCCGGGTTTTTTACGTTTTAATTTCCAGGACTTGAACTGCCATGTCCTCTGAAGAAGGAAAGCTCTTCGTGGGAGGGCTCAACTTTAACACCGACGAGCAGGCACTGGAAGACCACTTCAGCAGTTTCGGACCTATCTCTGAGGTGGTCGTTGTCAAGGACCGGGAGACTCAGCGGTCCAGGGGTTTTGGTTTCATCACCTTCACCAACCCAGAGCATGCTTCAGTTGCCATGAGAGCCATGAACGGAGAGTCTCTGGATGGTCGTCAGATCCGTGTGGATCATGCAGGCAAGTCTGCTCGGGGAACCAGAGGAGGTGGCTTTGGGGCCCATGGGCGTGGTCGCAGCTACTCTAGAGGTGGTGGGGACCAGGGCTATGGGAGTGGCAGGTATTATGACAGTCGACCTGGAGGGTATGGATATGGATATGGACGTTCCAGAGACTATAATGGCAGAAACCAGGGTGGTTATGACCGCTACTCAGGAGGAAATTACAGAGACAATTATGACAACTGAAATGAGACATGCACATAATATAGATACACAAGGAATAATTTCTGATCCAGGATCGTCCTTCCAAATGGCTGTATTTATAAAGGTTTTTGGAGCTGCACCGAAGCATCTTATTTTATAGTATATCAACCTTTTGTTTTTAAATTGACCTGCCAAGGTAGCTGAAGACCTTTTAGACAGTTCCATCTTTTTTTTTAAATTTTTTCTGCCTATTTAAAGACAAATTATGGGACGTTTGTAGAACCTGAGTATTTTTCTTTTTACCAGTTTTTTAGTTTGAGCTCTTAGGTTTATTGGAGCTAGCAATAATTGGTTCTGGCAAGTTTGGCCAGACTGACTTCAAAAAATTAATGTGTATCCAGGGACATTTTAAAAACCTGTACACAGTGTTTATTGTGGTTAGGAAGCAATTTCCCAATGTACCTATAAGAAATGTGCATCAAGccagcctgaccaacatggtgaaaccccatctgtactaaacataaaaaaattagcctggcatggtggtgtacgcctgtaatcccagtgacttgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagctaagatcgcgccactgtactccagcctgggcaacagcgagactccatctcaaaaaaaaaggaaaTGTGTATCAAGAACATGATTATCCAGCGGTATTTTCTAATTCAGATCATCAAACTGATTATATAGAAGAGTTGGCTTTAAAATGTTTGCAAATGTCTTTTTTTTTTTAATACTGGAAGAAAAAATATTCTGTTGTGTCTCATACAGTGCTTAGGATGTCTTTCACAGAGCTTATTAAAAAGATGAAACCTGAGAACAAACTGCTTTATTCTTACTCAGCCCATTTTGCAAATTAAAAGTgggggcagaggtgggcggatcacctgaggtcaggagttcgagaccagcctggccaacagggcaaaaccccatctctactaaaaatacaaaagttagcggggcgtggtggcgggtgcatgtaatcccagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcggaagttgcagtgagctgagattgtgccactgcactccagcctaggtgacagcaagactctgtctcaaaaaaaaaaaaaTGGCACATCAACGAGAGGGAGGCTTGGAGAATATTTGGTTGGTGGGTGGGCAGGGACTGCCAGAGGGTTAGGTGTACATTGAGGCCTGAGGCCTGCTGGAATTGGGTTTCCTTAACTGGTCTCTTATCTTAGTCCCATTGTTCTGAGAACATAAGCACCTAATCTCATGGCGTGAGCTAATCCCTATCATAAATAGTGGTACCAGTTCATTCCTTCCCCTGAAATGATGGGGGTTGGGCAGAGATGCACTGAACTCATCTTTGTGTATGAGGGCCATGAGAGAGGCCTGGTTTGAAAACAATGCTAAgagctcagattccaggatttatgtaggggctcttctacttcccaggtatttgacctcaggtgagtcatttaatttcagccttaTGCCATTTTACATTTTCTGTGGAGGGTTAGGTTAATTGGCATATAAAGCCACTGAGAAGAGTTGGCAAAGCTCTCAGTCACGGGGATTTGATCTTTTTTGGTGTGTGTGTGTCTTGGGTGGTAAAGTGGTAATTTTGTAATTCTAGCTGGTCTTAGTTCCTCAGTTCTGCTCCCTTTAGTCATGGTTCTTTCTAGTGGCTGTATTGAGGCCCCATGGGTGTTATCCCTCCATTGGTTCTAGTTTGGAACAGAAAAATCTGTTGTATTCATGGCTTTCACCTGGCTAATACTGAGCTAAGTTACCACCAGGTTGCAAACTCCAGGACATTATTGTCCTGAGCTGCCTATTCCCTTGCTGGTGCGTTGTGGAACCCTGTATTATTAGTTCCAGTCCTGGAGGCCTGCCTCCTGAGTTTCCCAGCTAGTTGGGACAGGCCCCAATATCCCTTCTTCCTGTAACCCAAACAGTCATGAATTTGCTTTGGCAGGTGGATGGAGACTTGGGAACTTCCACCTCACCCACTAAGCCAGGCCCAGGCTATGGGGCATTGTGGCTAACCCCACCAGGTGGATACTTGGTCTGAGGACGCATCTTATTCTGGGCCTTTAGGGAGCTAAGGCAGTGAGAATTGGCAGGAGGACTGCTGTGAATGCCTTGTAGGTCGGGGGATTGGAGGGGGTCCTCTGCTCCCTGTCTCTCAGGATGGCAATGTACCTCTCACCCCCAGTGTCAGCTGAGGTAGGATCCATAATCAGTAATATTCCTGCAACAAAATGTTCCTAAGTGGAATCAATGAAGACCAAAATTTATTTGTATAACAACTCTAAACCTGCTCTGCTCTGCTGTGTTTACAATGTGCTTTGTGATCATCCAGCCCAGGGAGTCCCAGTCTCTGGCTGTCTATCTGCTCTAAGGAAGAGAGCCCACAGTTCTCTATAGTGCCATAGTCTGTGATGAATAAAGTTCCAGATTTGAGGTCAACCCCCGACCACCCTTAAAGTGCTTGTTGGTCTCCTACTTTGGTTTGTCTTCAGCATCCAACTGATGCACATTTGTCAAGAACCCACTGAGGCTAGAAACCCCCCAAACACTCAAGGTACCTTGAGAACATGTATCCCAAGACCTGCAAAGACCAAACACATGGCCTGTAACTACTTTTCACTTTCAAGCCCTGGAACTTGTCTGTACCAAAAATCTTTCTGAACCATTCACCAAATCTCTTGTCAAGGGCCAGAATAAATTAAGAGATTGGCTTTTGGTTTTCAATTAGGCTTTCAAGTCCTAAGCCCAACCCCTCCTATCCCACCTAGGCAGAAATCACTTCAGATCCTTGCTTCCTAGTttaatttcttctctgcctcagttataacatccataaaatggaaataataatacccacctcacacaggggttaggagtgtttttttgttggtttttttccagacagggtctcactctgtctcccaggctggagtgcagtggcacaatctcggctcactgtaccctccgcctcccaggttcaagcagttctcatgcctcagcctcccaagtagctgggattacaggtgcctgccaccacgcccggctaatttttgtattaatagagacagggtttcaccgtgttgggcaggctggtcctgaactcctgacctcaagtgatccacccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacacctggcctaggagttaagagtattaaatgttaagaacagACCAAGTCCATCAAACAGCTCCACACCCTTGTTCCATGTTCTGGATTGGGGAGTTGTGGGGGTGGAGGTGTAGAACTTTTAAAAAGCTTCTTAAAATAAGTTGCTGTGAATACTTCAGGTATATAAAAAAACATTGGTTGACAATAAGCCAGTGTTCTGCCATTCTTACCTGCTTATCAAGACAAAACCTGCTCAAGTCCCTGCCCAGCTGCATTCCAAGTGTTTTCAAGtttggtggtaagacctgacctgaggcttcttataacctttactcagtgggaatatgcatacagttcactacagaaatatttgtatttacttagaggaagtgccctggatctgggggcgGGGGGGGGCGGGGGGAATGGGTCTTTTCTAAATTGTTAAAAGCAGTTCATGCCATTATTCTTAATAAACATTTCTAATATGCTGTGAAA