Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ABCE1
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ATP binding cassette subfamily E member 1
Also known as ABC38|OABP|RLI|RLI1|RNASEL1|RNASELI|RNS4I
Coordinate chr4:145098311-145129524
Strand +
Gene summary The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the OABP subfamily. Alternatively referred to as the RNase L inhibitor, this protein functions to block the activity of ribonuclease L. Activation of ribonuclease L leads to inhibition of protein synthesis in the 2-5A/RNase L system, the central pathway for viral interferon action. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008]

Retrocopy(s) from ABCE1

Retroname Coord Strand Genomic Region ENSG
ABCE1P1 chr1:192246229-192247495 - Intergenic
ENSG00000226723 UCSC
ABCE1P2 chr7:23560829-23564393 - Intergenic
ENSG00000224785 UCSC

Expression

Transcript Sequences

>NM_001040876.2
ACCGCCATTTTGGCCGGTGGCCGTGAGAACACGCTGTGTGGCTGAAAAGTGAAGGCAAGAGCTGATTTGGCCTCTGTGCTCCCCTCCGCAAGGGGATCGTTTTCTCCAGAGCTGGATATTCTTTCGCCCAGTTATGGCAGACAAGTTAACGAGAATTGCTATTGTCAACCATGACAAATGTAAACCTAAGAAATGTCGACAGGAATGCAAAAAGAGTTGTCCTGTAGTTCGAATGGGAAAATTATGCATAGAGGTTACACCCCAGAGCAAAATAGCATGGATTTCCGAAACTCTTTGTATTGGTTGTGGTATCTGTATTAAGAAATGCCCCTTTGGCGCCTTATCAATTGTCAATCTACCAAGCAACTTGGAAAAAGAAACCACACATCGATATTGTGCCAATGCCTTCAAACTTCACAGGTTGCCTATCCCTCGTCCAGGTGAAGTTTTGGGATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCTTTAAAAATTTTAGCAGGAAAACAAAAGCCAAACCTTGGAAAGTACGATGATCCTCCTGACTGGCAGGAGATTTTGACTTATTTCCGTGGATCTGAATTACAAAATTACTTTACAAAGATTCTAGAAGATGACCTAAAAGCCATCATCAAACCTCAATATGTAGACCAGATTCCTAAGGCTGCAAAGGGGACAGTGGGATCTATTTTGGACCGAAAAGATGAAACAAAGACACAGGCAATTGTATGTCAGCAGCTTGATTTAACCCACCTAAAAGAACGAAATGTTGAAGATCTTTCAGGAGGAGAGTTGCAGAGATTTGCTTGTGCTGTCGTTTGCATACAGAAAGCTGATATTTTCATGTTTGATGAGCCTTCTAGTTACCTAGATGTCAAGCAGCGTTTAAAGGCTGCTATTACTATACGATCTCTAATAAATCCAGATAGATATATCATTGTGGTGGAACATGATCTAAGTGTATTAGACTATCTCTCCGACTTCATCTGCTGTTTATATGGTGTACCAAGCGCCTATGGAGTTGTCACTATGCCTTTTAGTGTAAGAGAAGGCATAAACATTTTTTTGGATGGCTATGTTCCAACAGAAAACTTGAGATTCAGAGATGCATCACTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGTATGTATAAATATCCAGGAATGAAGAAAAAAATGGGAGAATTTGAGCTAGCAATTGTAGCTGGAGAGTTTACAGATTCTGAAATTATGGTGATGCTGGGGGAAAATGGAACGGGTAAAACGACATTTATCAGAATGCTTGCTGGAAGACTTAAACCTGATGAAGGAGGAGAAGTACCAGTTCTAAATGTCAGTTATAAGCCACAGAAAATTAGTCCCAAATCAACTGGAAGTGTTCGCCAGTTACTACATGAAAAGATAAGAGATGCTTATACTCACCCACAATTTGTGACCGATGTAATGAAGCCTCTGCAAATTGAAAACATCATTGATCAAGAGGTGCAGACATTATCTGGTGGTGAACTACAGCGAGTAGCTTTAGCCCTTTGCTTGGGCAAACCTGCTGATGTCTATTTAATTGATGAACCATCTGCATATTTGGATTCTGAGCAAAGACTGATGGCAGCTCGAGTTGTCAAACGTTTCATACTCCATGCAAAAAAGACAGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATCTAGCGGATCGCGTCATCGTTTTTGATGGTGTTCCATCTAAGAACACAGTTGCAAACAGTCCTCAAACCCTTTTGGCTGGCATGAATAAATTTTTGTCTCAGCTTGAAATTACATTCAGAAGAGATCCAAACAACTATAGGCCACGAATAAACAAACTTAATTCAATTAAGGATGTAGAACAAAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAGACTGACTCTGAGAATATTGATAAGCCATTTATTAAAAGGAGTATTTACTAGAATTTTTTGTCATATAAAACTTGAATCAGGATTTTATGCCCCACATACTCTGGAACTTGAAGTATAATATACTTAATATAACATAAAAAGCCAGTTGGGTTCTAAATTGTAGTTGAAACACAGAAAATGCCACTTTTCTGTTCCTGAAGAGGCTCTTTTGTGCATAATATTCTAAAATGAAGACATTTCAAGCTATACAAATTACTTCCAAGTTTTCATGATGTATGGGAAGATTTTCAGTAGGTGTATTATATTCACGGTACCAAATGCTGACCAGTGTTGCTCCATTTTTTAAATCTTGAAAAGGGTTTCTGTACTTACCTGGTTTGCCAAGTATGCCAGTGTAATGAAACTGCCCTTATTTTAAAAGCCAGTCAAAGATTCCACTGATTGACATTTGATAAATAAACATCAGGATTATGTTTATTGTTTGTTTTCAGTCTTTGCACTATATTACCAGTATATGGTTTCCGAGGAAGATTATCTACTGCAAAACACCACTGTTGGAAAAATAGGTATTTTTAAATTGTTTTTAATCTTTTTTGGTGCTTTTAAACATGTTTAGCAAAAACCAATTCAGTTCCATTCCCCGCAAAAAACCCCTAACTTTACTCTGAACTTTTTTTGTTTTTGCATTCCATGAGGTTCTGTATTCAGTCATTCTCTAGGTAATGTCATTTTTGTACACATATATTTATATAATCACTGATTGAGATTTAGGAAAAAGCATTTCTAAAGAATATTTGCTTCCCTTAGAACTACAGACtcgaaatctttaaagatggtgcctaagcatctatgtattttttttaagttccacagatttttctgttgggcagccaaggattataaaccactTCCCTAAAGGCAACATTAATGCAAAAGTCCCCAGATGGCAATACAAAGTATCCCCTGGTACCACATATATTCATTTGTGAGTTTGGATATAGAGCACATTATCTAAACCATTTTGTAGTTCCAAAAACCCATCTAAATTTCTTGAGTTCCTGAATTTTGAACAGGATTACCTGGAGCCTGGAGCCACTTTAAGTTGTACTTCTGACTAAACTGGAATTATGAGTGAGGAAGAGTGTTTACTAAATAAATGACTGGGGCAAGCAAAATTGAGGAGGAAATTAGAAACTGTTTGACAAACTTTAAGAGCTACTTGAAATAACAGAAGTCTTGATTAATATGCAAATAATGGCTAGAAAGTATGGTTTAACTGGACCCTATTATGCCTTTTAAAAATAATTTCAGTAACCCATAaatacatgttgtaaaaaattcaaatatacagaatggaataaaaaaatgatctccctttattaccctcccaaaggttaccagcgtttgaatttaataatgtatattctttcatgcttttttctgtgcacttacctaagtgtgaatatgtaaagggtttgttttgtatacaaatgggattatactAAAATAAGTAATGCCTATTTTTAAGGATAGGTTAAATTTGTGAATGATCATTTCAAATATATTGAATAAAATAAGCAAAAGCTATTGTTATTTACTGATCCTGGATTGTCTTAAAGAAAGTACTTGTGATATAAGAGCACAGTTCTACTTACTGCTAATGACAGAATATGTATTAAACGTATTTTCATGTAAATGAAATCTTTAAAATATGTATCTTAAAATTTTACATAGCAACAGAAAGGCCTACAATTGCTAACACAAGAAAAATACTTATAAAATCAGTATAAAATCAATGCAGATGTTAGCAAAAGAATGAGACTACTTCATATGTCCTAATTGGAAAAAGTCTCAAATACTTAAAAAAACAAAAAACTGGAACAGTTTATTATACTACCATTTTTGTGAAAATATACAAAATATTGAAATAAAGGAATACTCAAGAAACAGA
>NM_002940.3
ACCGCCATTTTGGCCGGTGGCCGTGAGAACACGCTGTGTGGCTGAAAAGTGAAGGCAAGAGCTGATTTGGCCTCTGTGCTCCCCTCCGCAAGGGGATCGTTTTCTCCAGAAGAGCTGGATATTCTTTCGCCCAGTTATGGCAGACAAGTTAACGAGAATTGCTATTGTCAACCATGACAAATGTAAACCTAAGAAATGTCGACAGGAATGCAAAAAGAGTTGTCCTGTAGTTCGAATGGGAAAATTATGCATAGAGGTTACACCCCAGAGCAAAATAGCATGGATTTCCGAAACTCTTTGTATTGGTTGTGGTATCTGTATTAAGAAATGCCCCTTTGGCGCCTTATCAATTGTCAATCTACCAAGCAACTTGGAAAAAGAAACCACACATCGATATTGTGCCAATGCCTTCAAACTTCACAGGTTGCCTATCCCTCGTCCAGGTGAAGTTTTGGGATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCTTTAAAAATTTTAGCAGGAAAACAAAAGCCAAACCTTGGAAAGTACGATGATCCTCCTGACTGGCAGGAGATTTTGACTTATTTCCGTGGATCTGAATTACAAAATTACTTTACAAAGATTCTAGAAGATGACCTAAAAGCCATCATCAAACCTCAATATGTAGACCAGATTCCTAAGGCTGCAAAGGGGACAGTGGGATCTATTTTGGACCGAAAAGATGAAACAAAGACACAGGCAATTGTATGTCAGCAGCTTGATTTAACCCACCTAAAAGAACGAAATGTTGAAGATCTTTCAGGAGGAGAGTTGCAGAGATTTGCTTGTGCTGTCGTTTGCATACAGAAAGCTGATATTTTCATGTTTGATGAGCCTTCTAGTTACCTAGATGTCAAGCAGCGTTTAAAGGCTGCTATTACTATACGATCTCTAATAAATCCAGATAGATATATCATTGTGGTGGAACATGATCTAAGTGTATTAGACTATCTCTCCGACTTCATCTGCTGTTTATATGGTGTACCAAGCGCCTATGGAGTTGTCACTATGCCTTTTAGTGTAAGAGAAGGCATAAACATTTTTTTGGATGGCTATGTTCCAACAGAAAACTTGAGATTCAGAGATGCATCACTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGTATGTATAAATATCCAGGAATGAAGAAAAAAATGGGAGAATTTGAGCTAGCAATTGTAGCTGGAGAGTTTACAGATTCTGAAATTATGGTGATGCTGGGGGAAAATGGAACGGGTAAAACGACATTTATCAGAATGCTTGCTGGAAGACTTAAACCTGATGAAGGAGGAGAAGTACCAGTTCTAAATGTCAGTTATAAGCCACAGAAAATTAGTCCCAAATCAACTGGAAGTGTTCGCCAGTTACTACATGAAAAGATAAGAGATGCTTATACTCACCCACAATTTGTGACCGATGTAATGAAGCCTCTGCAAATTGAAAACATCATTGATCAAGAGGTGCAGACATTATCTGGTGGTGAACTACAGCGAGTAGCTTTAGCCCTTTGCTTGGGCAAACCTGCTGATGTCTATTTAATTGATGAACCATCTGCATATTTGGATTCTGAGCAAAGACTGATGGCAGCTCGAGTTGTCAAACGTTTCATACTCCATGCAAAAAAGACAGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATCTAGCGGATCGCGTCATCGTTTTTGATGGTGTTCCATCTAAGAACACAGTTGCAAACAGTCCTCAAACCCTTTTGGCTGGCATGAATAAATTTTTGTCTCAGCTTGAAATTACATTCAGAAGAGATCCAAACAACTATAGGCCACGAATAAACAAACTTAATTCAATTAAGGATGTAGAACAAAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAGACTGACTCTGAGAATATTGATAAGCCATTTATTAAAAGGAGTATTTACTAGAATTTTTTGTCATATAAAACTTGAATCAGGATTTTATGCCCCACATACTCTGGAACTTGAAGTATAATATACTTAATATAACATAAAAAGCCAGTTGGGTTCTAAATTGTAGTTGAAACACAGAAAATGCCACTTTTCTGTTCCTGAAGAGGCTCTTTTGTGCATAATATTCTAAAATGAAGACATTTCAAGCTATACAAATTACTTCCAAGTTTTCATGATGTATGGGAAGATTTTCAGTAGGTGTATTATATTCACGGTACCAAATGCTGACCAGTGTTGCTCCATTTTTTAAATCTTGAAAAGGGTTTCTGTACTTACCTGGTTTGCCAAGTATGCCAGTGTAATGAAACTGCCCTTATTTTAAAAGCCAGTCAAAGATTCCACTGATTGACATTTGATAAATAAACATCAGGATTATGTTTATTGTTTGTTTTCAGTCTTTGCACTATATTACCAGTATATGGTTTCCGAGGAAGATTATCTACTGCAAAACACCACTGTTGGAAAAATAGGTATTTTTAAATTGTTTTTAATCTTTTTTGGTGCTTTTAAACATGTTTAGCAAAAACCAATTCAGTTCCATTCCCCGCAAAAAACCCCTAACTTTACTCTGAACTTTTTTTGTTTTTGCATTCCATGAGGTTCTGTATTCAGTCATTCTCTAGGTAATGTCATTTTTGTACACATATATTTATATAATCACTGATTGAGATTTAGGAAAAAGCATTTCTAAAGAATATTTGCTTCCCTTAGAACTACAGACtcgaaatctttaaagatggtgcctaagcatctatgtattttttttaagttccacagatttttctgttgggcagccaaggattataaaccactTCCCTAAAGGCAACATTAATGCAAAAGTCCCCAGATGGCAATACAAAGTATCCCCTGGTACCACATATATTCATTTGTGAGTTTGGATATAGAGCACATTATCTAAACCATTTTGTAGTTCCAAAAACCCATCTAAATTTCTTGAGTTCCTGAATTTTGAACAGGATTACCTGGAGCCTGGAGCCACTTTAAGTTGTACTTCTGACTAAACTGGAATTATGAGTGAGGAAGAGTGTTTACTAAATAAATGACTGGGGCAAGCAAAATTGAGGAGGAAATTAGAAACTGTTTGACAAACTTTAAGAGCTACTTGAAATAACAGAAGTCTTGATTAATATGCAAATAATGGCTAGAAAGTATGGTTTAACTGGACCCTATTATGCCTTTTAAAAATAATTTCAGTAACCCATAaatacatgttgtaaaaaattcaaatatacagaatggaataaaaaaatgatctccctttattaccctcccaaaggttaccagcgtttgaatttaataatgtatattctttcatgcttttttctgtgcacttacctaagtgtgaatatgtaaagggtttgttttgtatacaaatgggattatactAAAATAAGTAATGCCTATTTTTAAGGATAGGTTAAATTTGTGAATGATCATTTCAAATATATTGAATAAAATAAGCAAAAGCTATTGTTATTTACTGATCCTGGATTGTCTTAAAGAAAGTACTTGTGATATAAGAGCACAGTTCTACTTACTGCTAATGACAGAATATGTATTAAACGTATTTTCATGTAAATGAAATCTTTAAAATATGTATCTTAAAATTTTACATAGCAACAGAAAGGCCTACAATTGCTAACACAAGAAAAATACTTATAAAATCAGTATAAAATCAATGCAGATGTTAGCAAAAGAATGAGACTACTTCATATGTCCTAATTGGAAAAAGTCTCAAATACTTAAAAAAACAAAAAACTGGAACAGTTTATTATACTACCATTTTTGTGAAAATATACAAAATATTGAAATAAAGGAATACTCAAGAAACAGA