Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Actn4
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name actinin alpha 4
Also known as -
Coordinate chr7:28592673-28661799
Strand -
Gene summary Enables actin filament binding activity. Involved in several processes, including bicellular tight junction assembly; positive regulation of pinocytosis; and protein localization to bicellular tight junction. Located in several cellular components, including Z disc; cytoskeleton; and pseudopodium. Is expressed in early conceptus and heart. Used to study focal segmental glomerulosclerosis 1. Human ortholog(s) of this gene implicated in focal segmental glomerulosclerosis and focal segmental glomerulosclerosis 1. Orthologous to human ACTN4 (actinin alpha 4). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Actn4

Retroname Coord Strand Genomic Region ENSG
Actn4P1 chr1:4329070-4330621 - Intragenic
Intragenic
Intragenic
Intragenic
 ENSMUSG00000102948 UCSC

Expression

Transcript Sequences

>NM_001360548.1
aGTGCGCAGGCGCGGCAAGTGAACTGCGCAGGCGTCAGTCTTGGGCGGGCTGAAAGCAGCTGAAGCGGCGGCCGAGTCGGAGCCTCCGGCACAGGGGCGGGAGCTGAGGCGGTAGCGGACCGGCTGGCGGGCTAGCGAAAGGCGGCGGAATGGTGGACTACCACGCAGCGAACCAGGCGTACCAGTACGGCCCGAACAGCGGCGGCGGCAATGGCGCGGGTGGCGGCGGAAGCATGGGCGACTACATGGCCCAGGAGGATGACTGGGACCGGGACCTGCTGTTGGACCCGGCCTGGGAGAAGCAGCAGCGCAAGACCTTCACAGCCTGGTGCAACTCTCATCTTCGGAAGGCTGGCACTCAGATCGAGAATATCGATGAGGACTTCAGGGATGGGCTCAAACTTATGCTTCTGTTGGAGGTCATTTCAGGGGAGCGTTTGCCTAAGCCAGAGCGGGGGAAGATGCGAGTGCACAAGATCAACAATGTAAACAAAGCCCTGGACTTCATCGCCAGCAAGGGAGTCAAGCTGGTGTCCATCGGGGCAGAAGAGATTGTGGATGGCAATGCAAAGATGACCCTGGGAATGATCTGGACCATCATCCTCAGATTTGCCATCCAGGACATCTCTGTGGAAGAGACCTCTGCTAAGGAAGGACTCCTCCTCTGGTGCCAGAGAAAGACAGCCCCATATAAAAACGTCAACGTCCAGAACTTCCATATCAGCTGGAAGGACGGGCTGGCCTTCAATGCACTCATCCACCGGCACAGGCCTGAGCTGATTGAGTATGACAAGCTGCGGAAGGATGATCCAGTCACCAACCTAAACAATGCATTTGAAGTGGCTGAGAAATACCTCGATATCCCCAAGATGTTGGATGCTGAGGATATTGTAGGCACTCTGAGGCCAGATGAGAAGGCCATCATGACTTACGTGTCCTGCTTCTACCACGCCTTCTCGGGGGCCCAGAAGGCTGAGACCGCTGCCAACCGGATCTGCAAGGTGCTGGCTGTGAACCAGGAAAATGAGCACCTGATGGAAGACTATGAACGCCTGGCCAGTGATCTTCTAGAGTGGATTCGGCGCACCATCCCCTGGCTGGAGGACCGGGTGCCTCAGAAGACCATCCAGGAAATGCAGCAGAAGCTGGAGGACTTCCGAGACTATAGGCGTGTGCACAAGCCGCCCAAGGTGCAGGAGAAGTGTCAGCTGGAGATCAACTTCAACACACTGCAGACCAAGCTGCGGCTCAGCAACCGGCCTGCCTTCATGCCCTCCGAGGGCAGGATGGTCTCCGACATCAACAATGGATGGCAGCACCTGGAGCAGGCTGAGAAGGGCTATGAAGAATGGCTGCTGAATGAAATCCGTAGGCTGGAACGGCTTGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCTTCCATCCACGAGGCCTGGACTGATGGGAAGGAGGCCATGCTGAAGCAACGGGACTACGAGACAGCCACCCTGTCAGACATCAAAGCTCTGATCCGAAAACATGAGGCCTTTGAAAGTGACCTGGCTGCACACCAGGACCGAGTGGAGCAGATTGCTGCAATTGCTCAGGAGCTCAACGAGCTGGACTACTATGACTCCCACAACGTCAACACACGGTGCCAGAAGATCTGCGACCAGTGGGATAACCTGGGCTCTCTGACACACAGTCGCAGGGAAGCCTTGGAGaaaacagagaaacagCTAGAGACCATCGACCAGCTACATTTGGAGTATGCCAAGCGGGCTGCACCCTTCAACAACTGGATGGAGAGTGCCATGGAGGACCTGCAGGACATGTTCATCGTCCACACCATCGAGGAGATCGAGGGCCTGATCTCAGCCCATGACCAGTTCAAGTCCACCCTGCCAGATGCTGACAGGGAGCGTGAGGCCATCCTGGCCATCCACAAGGAGGCCCAGAGGATCGCTGAGAGCAATCACATCAAGCTGTCGGGCAGCAATCCCTACACCACTGTTACCCCCCAGATCATCAACTCCAAGTGGGAGAAGGTGCAGCAGCTGGTGCCAAAGAGGGACCATGCACTCCTGGAGGAGCAGAGCAAGCAGCAATCCAATGAGCACCTTCGCCGACAGTTCGCCAGCCAAGCCAATATGGTGGGGCCGTGGATCCAGACCAAGATGGAGGAGATCGGGCGCATCTCCATTGAGATGAACGGGACTCTGGAAGACCAGCTGAGCCACCTGAAGCAGTACGAGCGCAGCATCGTGGACTACAAGCCCAGCCTGGACCTGCTGGAGCAGCAGCACCAGCTCATCCAGGAGGCCCTCATCTTCGACAACAAGCACACCAACTACACAATGGAGcaTATCCGTGTGGGCTGGGAGCAGCTGCTCACGACCATTGCCCGCACCATCAATGAGGTGGAAAACCAGATCCTCACCCGAGATGCCAAGGGTATCAGCCAGGAGCAGATGCAGGAGTTCCGGGCATCCTTCAACCATTTTGACAAGGACCATGGCGGGGCACTGGGGcctgaggaattcaaggcctgcctCATCAGCCTGGGCTATGACGTGGAGAATGACCGGCAGGGTGATGCTGAGTTCAACCGGATCATGAGTGTGGTTGATCCCAACCATAGTGGCCTCGTGACCTTCCAAGCCTTCATTGACTTCATGTCAAGGGagaccacagacacagacacagctgaTCAGGTCATCGCCTCCTTCAAGGTCCTGGCAGGAGACAAGAACTTCATCACTGCTGAGGAACTGCGGAGAGAGCTGCCCCCCGACCAGGCCGAGTACTGCATCGCCCGCATGGCACCCTACCAGGGGCCTGATGCTGCTCCTGGCGCCCTTGACTACAAGTCCTTCTCCACAGCCCTCTATGGGGAGAGCGACCTGTGAGGCCCTTGGCCACCCTGAACAGAGACTCCCTTGGCCTCCCGGAGGGGCTGAggagccctgcccccaccctgacTCTGTATCTATGCAAAGAGCTCTTTGTGGTCCTTCTAGGGGGTCAGGCAGGGAGGGGCTAGGCAGGCCTCTCTTTCTCAGTCTTGTAGGGGAGGGAGGCTTGGCAATCAGCATTTCTGGTCTGCTAAATATATACGCTGTGCTGTGGGTTCTTAGCCGATTGGAGGGGACAACGGACTCCTGTGCCCCAGAGATACCTTCCTATCCCAGGTCCCCTCTGCCCCTGAGGCCCCTTCAAAGCCTCTCACATCTAGGCCAAAGCCCCATGTGCCTTGTCCAGGAACCGCCTGCCCTAAGAAGTCCAGCAGAGGGCACCCAGCTCCCCTGGACCAGATTCCAGTGGCTCCTCCCAGGAGCAGAGGACCTGCCATAGCCcttctctgcctcaggagtggCTGCGGGGCAATCAGCCCCAGCCCACCTGGCCTCTGAGTCTCAGATTTTCTAAggaccaaaaccaacaaaacacaaagaatggaacagaaacaaacaaaaaaatcatttaaaaaaaaaaaaaggaaaaaaaaaacttaaaaaaaaaaagaaaactttaaaaacttaaGACCTTCCAGAGAATTACTATTTACTTTATTAACTTACggatttattatataaatatatatccatCTAGCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCCCAGTCCCTCCTGATTTTCCCCTCGTGGCGGTGGGCAGAGGTCTCTGGGGACCttctgaggtggaggcaggctgcTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTCTCCACTCGCCCCCTTGAGTTTATtctgattgatttttattttcttggtttctggATAAACCACCCTCTGGGGATGGGAGAATAAAACATGTAATATTTTTAAGAAGGA