Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL6
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L6
Also known as L6|SHUJUN-2|TAXREB107|TXREB1
Coordinate chr12:112405181-112418850
Strand -
Gene summary This gene encodes a protein component of the 60S ribosomal subunit. This protein can bind specifically to domain C of the tax-responsive enhancer element of human T-cell leukemia virus type 1, and may participate in tax-mediated transactivation of transcription. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed throughout the genome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2016]

Retrocopy(s) from RPL6

Retroname Coord Strand Genomic Region ENSG
RPL6P24 chr10:13591424-13592342 - Intergenic
ENSG00000227474 UCSC
RPL6P2 chr1:119219308-119220115 - Intergenic
ENSG00000227056 UCSC
RPL6P32 chr1:150053844-150055037 + Intergenic
ENSG00000223945 UCSC
RPL6P33 chr1:241831912-241832821 + Intergenic
ENSG00000229022 UCSC
RPL6P25 chr12:83151311-83152220 + Intergenic
ENSG00000213270 UCSC
RPL6P31 chr1:45781260-45781958 + Intergenic
ENSG00000236111 UCSC
RPL6P27 chr18:6462109-6463029 - Intergenic
ENSG00000235552 UCSC
RPL6P4 chr2:11102122-11103026 + Intergenic
ENSG00000226080 UCSC
RPL6P5 chr2:145337849-145338004 + Intergenic
ENSG00000214064 UCSC
RPL6P7 chr3:155657850-155658559 + Intragenic
ENSG00000239212 UCSC
RPL6P8 chr3:160584925-160585811 + Intergenic
ENSG00000242285 UCSC
RPL6P12 chr4:169166253-169167138 + Intragenic
ENSG00000214671 UCSC
RPL6P34 chr4:65573439-65574362 + Intragenic
ENSG00000243199 UCSC
RPL6P35 chr4:86870171-86871037 + Intergenic
ENSG00000243312 UCSC
RPL6P37 chr5:133172185-133173062 - Intergenic
ENSG00000240611 UCSC
RPL6P38 chr5:155111151-155112341 - Intergenic
ENSG00000253646 UCSC
RPL6P43 chr7:137721967-137722886 + Intragenic
ENSG00000230383 UCSC
RPL6P21 chr7:14070514-14071399 - Intergenic
ENSG00000223445 UCSC
RPL6P42 chr7:64141510-64142420 - Intergenic
ENSG00000236976 UCSC
RPL6P44 chr8:33859428-33860241 - Intergenic
ENSG00000240738 UCSC
RPL6P49 chrX:1172563-1174101 + Intergenic
N/A UCSC
RPL6P30 chrX:16198401-16199307 - Intergenic
ENSG00000215313 UCSC
RPL6P29 chrX:98251661-98252555 + Intergenic
ENSG00000236243 UCSC
RPL6P50 chrY:1172563-1174101 + Intergenic
N/A UCSC
RPL6P39 chr6:15103400-15104130 - Intergenic
ENSG00000216754 UCSC
RPL6P46 chr11:47796178-47796416 + Intragenic
ENSG00000271543 UCSC
RPL6P47 chr15:41718345-41718671 - Intragenic
Intragenic
ENSG00000270702 UCSC
RPL6P36 chr4:104886082-104886712 - Intergenic
ENSG00000244470 UCSC
RPL6P9 chr3:142581622-142582431 + Intergenic
ENSG00000242390 UCSC
RPL6P45 chr8:94201900-94202816 - Intragenic
ENSG00000249510 UCSC
RPL6P40 chr6:23102853-23103577 + Intergenic
ENSG00000218476 UCSC
RPL6P41 chr6:98780224-98780505 - Intergenic
ENSG00000187472 UCSC
RPL6P6 chr2:210088355-210089074 + Intragenic
ENSG00000231063 UCSC
RPL6P48 chr22:44901605-44902447 + Intragenic
ENSG00000223730 UCSC

Expression

Transcript Sequences

>NM_000970.6
CTCTTTCCCATCTTGCAAGATGGCGGGTGAAAAAGTTGAGAAGCCAGATACTAAAGAGAAGAAACCCGAAGCCAAGAAGGTTGATGCTGGTGGCAAGGTGAAAAAGGGTAACCTCAAAGCTAAAAAGCCCAAGAAGGGGAAGCCCCATTGCAGCCGCAACCCTGTCCTTGTCAGAGGAATTGGCAGGTATTCCCGATCTGCCATGTATTCCAGAAAGGCCATGTACAAGAGGAAGTACTCAGCCGCTAAATCCAAGGTTGAAAAGAAAAAGAAGGAGAAGGTTCTCGCAACTGTTACAAAACCAGTTGGTGGTGACAAGAACGGCGGTACCCGGGTGGTTAAACTTCGCAAAATGCCTAGATATTATCCTACTGAAGATGTGCCTCGAAAGCTGTTGAGCCACGGCAAAAAACCCTTCAGTCAGCACGTGAGAAAACTGCGAGCCAGCATTACCCCCGGGACCATTCTGATCATCCTCACTGGACGCCACAGGGGCAAGAGGGTGGTTTTCCTGAAGCAGCTGGCTAGTGGCTTATTACTTGTGACTGGACCTCTGGTCCTCAATCGAGTTCCTCTACGAAGAACACACCAGAAATTTGTCATTGCCACTTCAACCAAAATCGATATCAGCAATGTAAAAATCCCAAAACATCTTACTGATGCTTACTTCAAGAAGAAGAAGCTGCGGAAGCCCAGACACCAGGAAGGTGAGATCTTCGACACAGAAAAAGAGAAATATGAGATTACGGAGCAGCGCAAGATTGATCAGAAAGCTGTGGACTCACAAATTTTACCAAAAATCAAAGCTATTCCTCAGCTCCAGGGCTACCTGCGATCTGTGTTTGCTCTGACGAATGGAATTTATCCTCACAAATTGGTGTTCTAAATGTCTTAAGAACCTAATTAAATAGCTGACTACAT
>NM_001024662.3
ACCTTAATTCTCTTTCCCATCTTGCAAGGTAAGAATCGCGGGCCTGTCTGCAAGACTTGAGTTCAGGACTCCCAATCCTTCGCCATCCGAACCTGGAGGGCATCCAGTCGACACCTACAGGGGTCGGACATGTCCAAGGCTAACTGAGAGGCCTTCCAGACGCTTCATTTTTGTTGTTTGGGTTTGCGGCAGGGCACAAAGAGGATGGCGGGTGAAAAAGTTGAGAAGCCAGATACTAAAGAGAAGAAACCCGAAGCCAAGAAGGTTGATGCTGGTGGCAAGGTGAAAAAGGGTAACCTCAAAGCTAAAAAGCCCAAGAAGGGGAAGCCCCATTGCAGCCGCAACCCTGTCCTTGTCAGAGGAATTGGCAGGTATTCCCGATCTGCCATGTATTCCAGAAAGGCCATGTACAAGAGGAAGTACTCAGCCGCTAAATCCAAGGTTGAAAAGAAAAAGAAGGAGAAGGTTCTCGCAACTGTTACAAAACCAGTTGGTGGTGACAAGAACGGCGGTACCCGGGTGGTTAAACTTCGCAAAATGCCTAGATATTATCCTACTGAAGATGTGCCTCGAAAGCTGTTGAGCCACGGCAAAAAACCCTTCAGTCAGCACGTGAGAAAACTGCGAGCCAGCATTACCCCCGGGACCATTCTGATCATCCTCACTGGACGCCACAGGGGCAAGAGGGTGGTTTTCCTGAAGCAGCTGGCTAGTGGCTTATTACTTGTGACTGGACCTCTGGTCCTCAATCGAGTTCCTCTACGAAGAACACACCAGAAATTTGTCATTGCCACTTCAACCAAAATCGATATCAGCAATGTAAAAATCCCAAAACATCTTACTGATGCTTACTTCAAGAAGAAGAAGCTGCGGAAGCCCAGACACCAGGAAGGTGAGATCTTCGACACAGAAAAAGAGAAATATGAGATTACGGAGCAGCGCAAGATTGATCAGAAAGCTGTGGACTCACAAATTTTACCAAAAATCAAAGCTATTCCTCAGCTCCAGGGCTACCTGCGATCTGTGTTTGCTCTGACGAATGGAATTTATCCTCACAAATTGGTGTTCTAAATGTCTTAAGAACCTAATTAAATAGCTGACTACAT
>NM_001320138.2
GCACTGTGTTCCTGGTCCTGGGTTCCAGAGGATGACACTGAGCCTGTCGCAGCCACGTTGGGGTTCCGCACTGAAGCCAAAAGGTTTCGCGTCTCCCAGCGTCCCCGACCGGAAGTCGCCTCTTGGTCTTTGCGATCTTTTTCTCTGGCTCAATTTGGGCTGATTCCGTTTGTGTCCGCAATTCCTAAATCGAGTTTCTTGAAAAGAGACACTGGTCTTAAGGGTTAAGACGAAAGATGGCGGGTGAAAAAGTTGAGAAGCCAGATACTAAAGAGAAGAAACCCGAAGCCAAGAAGGTTGATGCTGGTGGCAAGGTGAAAAAGGGTAACCTCAAAGCTAAAAAGCCCAAGAAGGGGAAGCCCCATTGCAGCCGCAACCCTGTCCTTGTCAGAGGAATTGGCAGGTATTCCCGATCTGCCATGTATTCCAGAAAGGCCATGTACAAGAGGAAGTACTCAGCCGCTAAATCCAAGGTTGAAAAGAAAAAGAAGGAGAAGGTTCTCGCAACTGTTACAAAACCAGTTGGTGGTGACAAGAACGGCGGTACCCGGGTGGTTAAACTTCGCAAAATGCCTAGATATTATCCTACTGAAGATGTGCCTCGAAAGCTGTTGAGCCACGGCAAAAAACCCTTCAGTCAGCACGTGAGAAAACTGCGAGCCAGCATTACCCCCGGGACCATTCTGATCATCCTCACTGGACGCCACAGGGGCAAGAGGGTGGTTTTCCTGAAGCAGCTGGCTAGTGGCTTATTACTTGTGACTGGACCTCTGGTCCTCAATCGAGTTCCTCTACGAAGAACACACCAGAAATTTGTCATTGCCACTTCAACCAAAATCGATATCAGCAATGTAAAAATCCCAAAACATCTTACTGATGCTTACTTCAAGAAGAAGAAGCTGCGGAAGCCCAGACACCAGGAAGGTGAGATCTTCGACACAGAAAAAGAGAAATATGAGATTACGGAGCAGCGCAAGATTGATCAGAAAGCTGTGGACTCACAAATTTTACCAAAAATCAAAGCTATTCCTCAGCTCCAGGGCTACCTGCGATCTGTGTTTGCTCTGACGAATGGAATTTATCCTCACAAATTGGTGTTCTAAATGTCTTAAGAACCTAATTAAATAGCTGACTACAT
>NM_001320139.2
GCACTGTGTTCCTGGTCCTGGGTTCCAGAGGATGACACTGAGCCTGTCGCAGCCACGTTGGGGTTCCGCACTGAAGCCAAAAGATGGCGGGTGAAAAAGTTGAGAAGCCAGATACTAAAGAGAAGAAACCCGAAGCCAAGAAGGTTGATGCTGGTGGCAAGGTGAAAAAGGGTAACCTCAAAGCTAAAAAGCCCAAGAAGGGGAAGCCCCATTGCAGCCGCAACCCTGTCCTTGTCAGAGGAATTGGCAGGTATTCCCGATCTGCCATGTATTCCAGAAAGGCCATGTACAAGAGGAAGTACTCAGCCGCTAAATCCAAGGTTGAAAAGAAAAAGAAGGAGAAGGTTCTCGCAACTGTTACAAAACCAGTTGGTGGTGACAAGAACGGCGGTACCCGGGTGGTTAAACTTCGCAAAATGCCTAGATATTATCCTACTGAAGATGTGCCTCGAAAGCTGTTGAGCCACGGCAAAAAACCCTTCAGTCAGCACGTGAGAAAACTGCGAGCCAGCATTACCCCCGGGACCATTCTGATCATCCTCACTGGACGCCACAGGGGCAAGAGGGTGGTTTTCCTGAAGCAGCTGGCTAGTGGCTTATTACTTGTGACTGGACCTCTGGTCCTCAATCGAGTTCCTCTACGAAGAACACACCAGAAATTTGTCATTGCCACTTCAACCAAAATCGATATCAGCAATGTAAAAATCCCAAAACATCTTACTGATGCTTACTTCAAGAAGAAGAAGCTGCGGAAGCCCAGACACCAGGAAGGTGAGATCTTCGACACAGAAAAAGAGAAATATGAGATTACGGAGCAGCGCAAGATTGATCAGAAAGCTGTGGACTCACAAATTTTACCAAAAATCAAAGCTATTCCTCAGCTCCAGGGCTACCTGCGATCTGTGTTTGCTCTGACGAATGGAATTTATCCTCACAAATTGGTGTTCTAAATGTCTTAAGAACCTAATTAAATAGCTGACTACAT
>NM_001320140.2
GCACTGTGTTCCTGGTCCTGGGTTCCAGAGGATGACACTGAGCCTGTCGCAGCCACGTTGGGGTTCCGCACTGAAGCCAAAAGGTTTCGCGTCTCCCAGCGTCCCCGACCGGAAGTCGCCTCTTGGTCTTTGCGATCTTTTTCTCTGGCTCAATTTGGGCTGATTCCGTTTGTGTCCGCAATTCCTAAATCGAGTTTCTTGAAAAGAGACACTGGTCTTAAGGGTTAAGACGAAAGGTACTGAAAATGGCGGGTGAAAAAGTTGAGAAGCCAGATACTAAAGAGAAGAAACCCGAAGCCAAGAAGGTTGATGCTGGTGGCAAGGTGAAAAAGGGTAACCTCAAAGCTAAAAAGCCCAAGAAGGGGAAGCCCCATTGCAGCCGCAACCCTGTCCTTGTCAGAGGAATTGGCAGGTATTCCCGATCTGCCATGTATTCCAGAAAGGCCATGTACAAGAGGAAGTACTCAGCCGCTAAATCCAAGGTTGAAAAGAAAAAGAAGGAGAAGGTTCTCGCAACTGTTACAAAACCAGTTGGTGGTGACAAGAACGGCGGTACCCGGGTGGTTAAACTTCGCAAAATGCCTAGATATTATCCTACTGAAGATGTGCCTCGAAAGCTGTTGAGCCACGGCAAAAAACCCTTCAGTCAGCACGTGAGAAAACTGCGAGCCAGCATTACCCCCGGGACCATTCTGATCATCCTCACTGGACGCCACAGGGGCAAGAGGGTGGTTTTCCTGAAGCAGCTGGCTAGTGGCTTATTACTTGTGACTGGACCTCTGGTCCTCAATCGAGTTCCTCTACGAAGAACACACCAGAAATTTGTCATTGCCACTTCAACCAAAATCGATATCAGCAATGTAAAAATCCCAAAACATCTTACTGATGCTTACTTCAAGAAGAAGAAGCTGCGGAAGCCCAGACACCAGGAAGGTGAGATCTTCGACACAGAAAAAGAGAAATATGAGATTACGGAGCAGCGCAAGATTGATCAGAAAGCTGTGGACTCACAAATTTTACCAAAAATCAAAGCTATTCCTCAGCTCCAGGGCTACCTGCGATCTGTGTTTGCTCTGACGAATGGAATTTATCCTCACAAATTGGTGTTCTAAATGTCTTAAGAACCTAATTAAATAGCTGACTACAT
>NM_001320141.2
AGCGGAGGACCGAGCGACGGCCGGGAATGGCAGCGCGGGGGCTCCGCGGAGGCGCCACGCACAGTGTCCAAAGCATCCTTGCTTCCTCCTGGAAACCGCGGCCGCCAGTGAATCAGAACCAGAAAAAGGCTAAATGATTCCCAGAGACACAGCCATGAAGCAGGTGGTTTCGATCTGAAAAAATCAAGGTGAAAAGCTCTAGCAACCAGAAAGAAACGAATGGAGGAAAATGGAAAACGCAAGCTAGAAGacagagtctcattctgtaggccaggccggagGACGGGAATGAGAAAGGCCATGTACAAGAGGAAGTAGTCAGCCGCTAAATCCAAGATGGCGGGTGAAAAAGTTGAGAAGCCAGATACTAAAGAGAAGAAACCCGAAGCCAAGAAGGTTGATGCTGGTGGCAAGGTGAAAAAGGGTAACCTCAAAGCTAAAAAGCCCAAGAAGGGGAAGCCCCATTGCAGCCGCAACCCTGTCCTTGTCAGAGGAATTGGCAGGTATTCCCGATCTGCCATGTATTCCAGAAAGGCCATGTACAAGAGGAAGTACTCAGCCGCTAAATCCAAGGTTGAAAAGAAAAAGAAGGAGAAGGTTCTCGCAACTGTTACAAAACCAGTTGGTGGTGACAAGAACGGCGGTACCCGGGTGGTTAAACTTCGCAAAATGCCTAGATATTATCCTACTGAAGATGTGCCTCGAAAGCTGTTGAGCCACGGCAAAAAACCCTTCAGTCAGCACGTGAGAAAACTGCGAGCCAGCATTACCCCCGGGACCATTCTGATCATCCTCACTGGACGCCACAGGGGCAAGAGGGTGGTTTTCCTGAAGCAGCTGGCTAGTGGCTTATTACTTGTGACTGGACCTCTGGTCCTCAATCGAGTTCCTCTACGAAGAACACACCAGAAATTTGTCATTGCCACTTCAACCAAAATCGATATCAGCAATGTAAAAATCCCAAAACATCTTACTGATGCTTACTTCAAGAAGAAGAAGCTGCGGAAGCCCAGACACCAGGAAGGTGAGATCTTCGACACAGAAAAAGAGAAATATGAGATTACGGAGCAGCGCAAGATTGATCAGAAAGCTGTGGACTCACAAATTTTACCAAAAATCAAAGCTATTCCTCAGCTCCAGGGCTACCTGCGATCTGTGTTTGCTCTGACGAATGGAATTTATCCTCACAAATTGGTGTTCTAAATGTCTTAAGAACCTAATTAAATAGCTGACTACAT