Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL9
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L9
Also known as L9|NPC-A-16
Coordinate chr4:39454124-39458922
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L6P family of ribosomal proteins. It is located in the cytoplasm. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2016]

Retrocopy(s) from RPL9

Retroname Coord Strand Genomic Region ENSG
RPL9P21 chr10:44414414-44415166 - Intergenic
ENSG00000214089 UCSC
RPL9P40 chr11:41538403-41539061 + Intergenic
ENSG00000242729 UCSC
RPL9P41 chr11:84639989-84640659 + Intragenic
Intragenic
ENSG00000240174 UCSC
RPL9P35 chr1:234284959-234285635 + Intragenic
ENSG00000232166 UCSC
RPL9P42 chr14:31462782-31463404 - Intergenic
ENSG00000239323 UCSC
RPL9P3 chr14:35262432-35263132 + Intragenic
ENSG00000240392 UCSC
RPL9P34 chr1:52189913-52190128 - Intragenic
ENSG00000236004 UCSC
RPL9P43 chr15:40480650-40481343 - Intergenic
ENSG00000244251 UCSC
RPL9P25 chr15:66379237-66379925 - Intragenic
ENSG00000240821 UCSC
RPL9P44 chr15:82372210-82372914 - Intergenic
ENSG00000237550 UCSC
RPL9P30 chr17:29855746-29856344 + Intragenic
ENSG00000240074 UCSC
RPL9P45 chr17:4281541-4281765 - Intragenic
N/A UCSC
RPL9P28 chr17:48691016-48691708 - Intergenic
ENSG00000242067 UCSC
RPL9P29 chr17:78845846-78846431 - Intergenic
ENSG00000267355 UCSC
RPL9P31 chr18:58631245-58631764 + Intergenic
ENSG00000239659 UCSC
RPL9P32 chr19:29956305-29957009 - Intragenic
ENSG00000242100 UCSC
RPL9P33 chr1:9576404-9577081 + Intragenic
ENSG00000231181 UCSC
RPL9P13 chr2:139732755-139733036 - Intergenic
ENSG00000228374 UCSC
RPL9P14 chr2:208031290-208031965 - Intergenic
ENSG00000185078 UCSC
RPL9P16 chr4:168755797-168756481 + Intragenic
ENSG00000214676 UCSC
RPL9P37 chr5:144522111-144523087 + Intergenic
ENSG00000213488 UCSC
RPL9P36 chr5:31822459-31823150 - Intragenic
ENSG00000224282 UCSC
RPL9P38 chr7:8938952-8939348 + Intergenic
ENSG00000236748 UCSC
RPL9P39 chr8:17150202-17150906 - Intergenic
ENSG00000244113 UCSC
RPL9P7 chrX:23836643-23837346 - Intragenic
ENSG00000238103 UCSC
RPL9P5 chr14:58564107-58564732 + Intergenic
ENSG00000239510 UCSC
RPL9P2 chr17:15443729-15444290 + Intragenic
Intragenic
ENSG00000234324 UCSC
RPL9P15 chr3:154676505-154677067 - Intergenic
ENSG00000240601 UCSC
RPL9P18 chr6:63615735-63616363 - Intergenic
ENSG00000213309 UCSC

Expression

Transcript Sequences

>NM_000661.5
AGACGTTCTTTCTTTGCTGCGTCTACTGCGAGAATGAAGACTATTCTCAGCAATCAGACTGTCGACATTCCAGAAAATGTCGACATTACTCTGAAGGGACGCACAGTTATCGTGAAGGGCCCCAGAGGAACCCTGCGGAGGGACTTCAATCACATCAATGTAGAACTCAGCCTTCTTGGAAAGAAAAAAAAGAGGCTCCGGGTTGACAAATGGTGGGGTAACAGAAAGGAACTGGCTACCGTTCGGACTATTTGTAGTCATGTACAGAACATGATCAAGGGTGTTACACTGGGCTTCCGTTACAAGATGAGGTCTGTGTATGCTCACTTCCCCATCAACGTTGTTATCCAGGAGAATGGGTCTCTTGTTGAAATCCGAAATTTCTTGGGTGAAAAATATATCCGCAGGGTTCGGATGAGACCAGGTGTTGCTTGTTCAGTATCTCAAGCCCAGAAAGATGAATTAATCCTTGAAGGAAATGACATTGAGCTTGTTTCAAATTCAGCGGCTTTGATTCAGCAAGCCACAACAGTTAAAAACAAGGATATCAGGAAATTTTTGGATGGTATCTATGTCTCTGAAAAAGGAACTGTTCAGCAGGCTGATGAATAAGATCTAAGAGTTACCTGGCTACAGAAAGAAGATGCCAGATGACACTTAAGACCTACTTGTGATATTTAAATGATGCAATAAAAGACCTATTGATTTGGACCTTCTTCTTAAA
>NM_001024921.4
AGACGTTCTTTCTTTGCTGCGTCTACTGCGAGGCTGGGACACACTGGGGCCCGCTGTCGGTCTCCCGTCCTCCGACATCTTGTCTGGAACTTCCGCCTGGCAGTCTCCAGTAGGAGTGGAGCTCTGTGCGGCGTAGTTTGGTGGAAAAACGGGCCTTGCGTCGGCCTCACCCCCAGTGTTTGTGTTTCAGAATGAAGACTATTCTCAGCAATCAGACTGTCGACATTCCAGAAAATGTCGACATTACTCTGAAGGGACGCACAGTTATCGTGAAGGGCCCCAGAGGAACCCTGCGGAGGGACTTCAATCACATCAATGTAGAACTCAGCCTTCTTGGAAAGAAAAAAAAGAGGCTCCGGGTTGACAAATGGTGGGGTAACAGAAAGGAACTGGCTACCGTTCGGACTATTTGTAGTCATGTACAGAACATGATCAAGGGTGTTACACTGGGCTTCCGTTACAAGATGAGGTCTGTGTATGCTCACTTCCCCATCAACGTTGTTATCCAGGAGAATGGGTCTCTTGTTGAAATCCGAAATTTCTTGGGTGAAAAATATATCCGCAGGGTTCGGATGAGACCAGGTGTTGCTTGTTCAGTATCTCAAGCCCAGAAAGATGAATTAATCCTTGAAGGAAATGACATTGAGCTTGTTTCAAATTCAGCGGCTTTGATTCAGCAAGCCACAACAGTTAAAAACAAGGATATCAGGAAATTTTTGGATGGTATCTATGTCTCTGAAAAAGGAACTGTTCAGCAGGCTGATGAATAAGATCTAAGAGTTACCTGGCTACAGAAAGAAGATGCCAGATGACACTTAAGACCTACTTGTGATATTTAAATGATGCAATAAAAGACCTATTGATTTGGACCTTCTTCTTAAA