Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name RPL11
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L11
Also known as DBA7|GIG34|L11|uL5
Coordinate chr1:23691779-23696835
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L5P family of ribosomal proteins. It is located in the cytoplasm. The protein probably associates with the 5S rRNA. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Dec 2010]

Retrocopy(s) from RPL11

Retroname Coord Strand Genomic Region ENSG
RPL11P3 chr10:87945479-87946080 + Intragenic
 ENSG00000213613 UCSC
RPL11P4 chr10:92596858-92597289 - Intragenic
 ENSG00000184111 UCSC
RPL11P5 chr12:120593963-120594566 - Intergenic
 ENSG00000242137 UCSC
RPL11P7 chr17:8199198-8199419 - Intergenic
 ENSG00000271002 UCSC
RPL11P1 chr2:64960052-64960515 - Intergenic
 ENSG00000227394 UCSC
RPL11P6 chr5:130989878-130990463 + Intergenic
 ENSG00000244192 UCSC

Expression

Transcript Sequences

>NM_000975.5
CTCTTCCTGCTCTCCATCATGGCGCAGGATCAAGGTGAAAAGGAGAACCCCATGCGGGAACTTCGCATCCGCAAACTCTGTCTCAACATCTGTGTTGGGGAGAGTGGAGACAGACTGACGCGAGCAGCCAAGGTGTTGGAGCAGCTCACAGGGCAGACCCCTGTGTTTTCCAAAGCTAGATACACTGTCAGATCCTTTGGCATCCGGAGAAATGAAAAGATTGCTGTCCACTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGGAGAAGGGTCTAAAGGTGCGGGAGTATGAGTTAAGAAAAAACAACTTCTCAGATACTGGAAACTTTGGTTTTGGGATCCAGGAACACATCGATCTGGGTATCAAATATGACCCAAGCATTGGTATCTACGGCCTGGACTTCTATGTGGTGCTGGGTAGGCCAGGTTTCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCATTGGGGCCAAACACAGAATCAGCAAAGAGGAGGCCATGCGCTGGTTCCAGCAGAAGTATGATGGGATCATCCTTCCTGGCAAATAAATTCCCGTTTCTATCCAAAAGAGCAATAAAAAGTTTTCAGTGAAATGTGCAATTCTGTTGTGTGTTCTGTGAAAGGATCCTGGCCATATTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTGATTGGATGCCAGTATTTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTGGTTGATGTGCTGTGGTGCAGTAGCCCCATTTGGAGGGGAGGGTTTGGTTGATGTTGGGGTTTGAATTTAGAGCCTTGGTTAAGCAGGGTGCAGTGCTCCTGTGTTCCAGGAGGCCCCCTGCTATTCAGTGATTCTGTTCTGTACTAGAAATTTTATCAGCATTGATGCGTCATGAAGGAATGACAGGCTTTGGTGTGATGGTTGAGATTAAATTTAGACTTAACTGTT
>NM_001199802.1
AAGGCCCTCGGCCGGAAGCTCCGCTTTCTCTTCCTGCTCTCCATCATGGCGGATCAAGGTGAAAAGGAGAACCCCATGCGGGAACTTCGCATCCGCAAACTCTGTCTCAACATCTGTGTTGGGGAGAGTGGAGACAGACTGACGCGAGCAGCCAAGGTGTTGGAGCAGCTCACAGGGCAGACCCCTGTGTTTTCCAAAGCTAGATACACTGTCAGATCCTTTGGCATCCGGAGAAATGAAAAGATTGCTGTCCACTGCACAGTTCGAGGGGCCAAGGCAGAAGAAATCTTGGAGAAGGGTCTAAAGGTGCGGGAGTATGAGTTAAGAAAAAACAACTTCTCAGATACTGGAAACTTTGGTTTTGGGATCCAGGAACACATCGATCTGGGTATCAAATATGACCCAAGCATTGGTATCTACGGCCTGGACTTCTATGTGGTGCTGGGTAGGCCAGGTTTCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCATTGGGGCCAAACACAGAATCAGCAAAGAGGAGGCCATGCGCTGGTTCCAGCAGAAGTATGATGGGATCATCCTTCCTGGCAAATAAATTCCCGTTTCTATCCAAAAGAGCAATAAAAAGTTTTCAGTGAAATGTGCAA