Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL13
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L13
Also known as BBC1|D16S444E|D16S44E|L13|SEMDIST
Coordinate chr16:89560657-89566829
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L13E family of ribosomal proteins. It is located in the cytoplasm. This gene is expressed at significantly higher levels in benign breast lesions than in breast carcinomas. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2011]

Retrocopy(s) from RPL13

Retroname Coord Strand Genomic Region ENSG
RPL13P15 chr10:7833567-7833905 - Intragenic
ENSG00000233990 UCSC
RPL13P12 chr17:17383354-17384063 - Intergenic
ENSG00000215030 UCSC
RPL13P2 chr20:46099474-46100194 + Intergenic
ENSG00000213820 UCSC
RPL13P chr6:28861399-28861961 + Intergenic
ENSG00000213916 UCSC
RPL13P13 chr1:176231154-176231607 - Intergenic
ENSG00000232463 UCSC
RPL13P5 chr12:6884210-6884585 + Intergenic
ENSG00000240370 UCSC
RPL13P6 chr14:103041459-103042106 + Intragenic
ENSG00000213176 UCSC
RPL13P4 chr15:75388566-75388711 + Intragenic
ENSG00000241890 UCSC
RPL13P16 chr19:56216973-56218005 - Intergenic
ENSG00000242411 UCSC
RPL13P17 chr20:46863611-46863910 - Intergenic
ENSG00000235922 UCSC
RPL13P14 chr8:70506233-70506664 - Intergenic
ENSG00000241105 UCSC

Expression

Transcript Sequences

>NM_000977.4
CTTTCCGCTCGGCTGTTTTCCTGCGCAGGAGCCGCAGGGCCGTAGGCAGCCATGGCGCCCAGCCGGAATGGCATGGTCTTGAAGCCCCACTTCCACAAGGACTGGCAGCGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCGTAAGATCCGCAGACGTAAGGCCCGGCAAGCCAAGGCGCGCCGCATCGCCCCGCGCCCCGCGTCGGGTCCCATCCGGCCCATCGTGCGCTGCCCCACGGTTCGGTACCACACGAAGGTGCGCGCCGGCCGCGGCTTCAGCCTGGAGGAGCTCAGGGTGGCCGGCATTCACAAGAAGGTGGCCCGGACCATCGGCATTTCTGTGGATCCGAGGAGGCGGAACAAGTCCACGGAGTCCCTGCAGGCCAACGTGCAGCGGCTGAAGGAGTACCGCTCCAAACTCATCCTCTTCCCCAGGAAGCCCTCGGCCCCCAAGAAGGGAGACAGTTCTGCTGAAGAACTGAAACTGGCCACCCAGCTGACCGGACCGGTCATGCCCGTCCGGAACGTCTATAAGAAGGAGAAAGCTCGAGTCATCACTGAGGAAGAGAAGAATTTCAAAGCCTTCGCTAGTCTCCGTATGGCCCGTGCCAACGCCCGGCTCTTCGGCATACGGGCAAAAAGAGCCAAGGAAGCCGCAGAACAGGATGTTGAAAAGAAAAAATAAAGCCCTCCTGGGGACTTGGAATCAGTCGGCAGTCATGCTGGGTCTCCACGTGGTGTGTTTCGTGGGAACAACTGGGCCTGGGATGGGGCTTCACTGCTGTGACTTCCTCCTGCCAGGGGATTTGGGGCTTTCTTGAAAGACAGTCCAAGCCCTGGATAATGCTTTACTTTCTGTGTTGAAGCACTGTTGGTTGTTTGGTTAGTGACTGATGTAAAACGGTTTTCTTGTGGGGAGGTTACAGAGGCTGACTTCAGAGTGGACttgtgttttttctttttaaagaggcaaggttgggctggtgctcacagctgtaatcccagcactttgaggttggctgggagttcaagaccagcctggccaacatgtcagaactactaaaaataaagaaatcagccatgcttggtgctgcacacttgtagttgcagctcctgggaggcagaggtgagggatcacttaacccaggaggcagaggctgcactgagccaggatcacgccactgcactctagcctgggcaacagtgagactgtctcaaaaaaaaaaaaagagacagggtcttcggcacccaggctggagtacagtgccacaatcatggctcactgcagtcttgaactcatggcctcaagcagtcctccctcagcctcccaagtagaggggtttataggcacgagaccctgcacccaacctagagttgccttttttaagcaaagcagtttcTAGTTAATGTAGCATCTTGGACTTTGGGGCGTCATTCTTAAGCTTGTTGTGCCCGGTAACCATGGTCCTCTTGCTCTGATTAACCCTTCCTTCAATGGGCTTCTTCACCCAGACACCAAGGTATGAGATGGCCCTGCCAAGTGTCGGCCTCTCCTGTTAAACAAAAACATTCTAAAGCCATTGTTCTTGCTTCATGGACAAGAGGCAGCCAGAGAGAGTGCCAGGGTGCCCTGGTCTGAGCTGGCATCCCCATGTCTTCTGTGTCCGAGGGCAGCATGGTTTCTCGTGCAGTGCTCAGACACAGCCTGCCCTAGTCCTACCAGCTCACAGCAGCACCTGCTCTCCTTGGCAGCTATGGCCATGACAACCCCAGAGAAGCAGCTTCAGGGACCGAGTCAGATTCTGTTTTGTCTACATGCCTCTGCCGGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGCGTGGAAATAGGTGATGCTGCTACCTCTGCTGCTGCACTCACAGCCACACTTGATACACGATGACACCTTGCTTGTTTGGAAACATCTAAACATCTAGTAGATGACTTGCAGGCTGTTGGCTACCAGTTTCCTGTCTGAGGTGTATATGTTAACTTCGTGATCAGTTTGTATGTTTGGGACTCTTGTCCTATGTAAAGTTAAGGTGggccgggtgcagtggctcacgcctgtaatcctaacactgggaggccgaggcgggtggatcacctgatggtgaaacctcatctctactgaaaatacaaaaattagctgagtggtga
>NM_033251.2
AGGTGAGGGAGACTGGGTCCTGGCCTTTGGGCATCATCCAGCGCCATCGGCCTGGCGCTTCAGCCAACGCGGGAGTGGATGGGCCCCTTCTTCTTCGCAGACAGCGTTCGGCCGCTGCCCGGGCTCTAGGCGCGGCCGGACGGCCCAGTCTGGAGGGTTCGGGGCGGAGGCCCGGGGGGGTGCGCGCGCCCGGGGTCCGGCCTCTCACTCGCTCCCCTCTCGTCCGCAGCCGCAGGGCCGTAGGCAGCCATGGCGCCCAGCCGGAATGGCATGGTCTTGAAGCCCCACTTCCACAAGGACTGGCAGCGGCGCGTGGCCACGTGGTTCAACCAGCCGGCCCGTAAGATCCGCAGACGTAAGGCCCGGCAAGCCAAGGCGCGCCGCATCGCCCCGCGCCCCGCGTCGGGTCCCATCCGGCCCATCGTGCGCTGCCCCACGGTTCGGTACCACACGAAGGTGCGCGCCGGCCGCGGCTTCAGCCTGGAGGAGCTCAGGGTGGCCGGCATTCACAAGAAGGTGGCCCGGACCATCGGCATTTCTGTGGATCCGAGGAGGCGGAACAAGTCCACGGAGTCCCTGCAGGCCAACGTGCAGCGGCTGAAGGAGTACCGCTCCAAACTCATCCTCTTCCCCAGGAAGCCCTCGGCCCCCAAGAAGGGAGACAGTTCTGCTGAAGAACTGAAACTGGCCACCCAGCTGACCGGACCGGTCATGCCCGTCCGGAACGTCTATAAGAAGGAGAAAGCTCGAGTCATCACTGAGGAAGAGAAGAATTTCAAAGCCTTCGCTAGTCTCCGTATGGCCCGTGCCAACGCCCGGCTCTTCGGCATACGGGCAAAAAGAGCCAAGGAAGCCGCAGAACAGGATGTTGAAAAGAAAAAATAAAGCCCTCCTGGGGACTTGGAATCAGTCGGCAGTCATGCTGGGTCTCCACGTGGTGTGTTTCGTGGGAACAACTGGGCCTGGGATGGGGCTTCACTGCTGTGACTTCCTCCTGCCAGGGGATTTGGGGCTTTCTTGAAAGACAGTCCAAGCCCTGGATAATGCTTTACTTTCTGTGTTGAAGCACTGTTGGTTGTTTGGTTAGTGACTGATGTAAAACGGTTTTCTTGTGGGGAGGTTACAGAGGCTGACTTCAGAGTGGACttgtgttttttctttttaaagaggcaaggttgggctggtgctcacagctgtaatcccagcactttgaggttggctgggagttcaagaccagcctggccaacatgtcagaactactaaaaataaagaaatcagccatgcttggtgctgcacacttgtagttgcagctcctgggaggcagaggtgagggatcacttaacccaggaggcagaggctgcactgagccaggatcacgccactgcactctagcctgggcaacagtgagactgtctcaaaaaaaaaaaaagagacagggtcttcggcacccaggctggagtacagtgccacaatcatggctcactgcagtcttgaactcatggcctcaagcagtcctccctcagcctcccaagtagaggggtttataggcacgagaccctgcacccaacctagagttgccttttttaagcaaagcagtttcTAGTTAATGTAGCATCTTGGACTTTGGGGCGTCATTCTTAAGCTTGTTGTGCCCGGTAACCATGGTCCTCTTGCTCTGATTAACCCTTCCTTCAATGGGCTTCTTCACCCAGACACCAAGGTATGAGATGGCCCTGCCAAGTGTCGGCCTCTCCTGTTAAACAAAAACATTCTAAAGCCATTGTTCTTGCTTCATGGACAAGAGGCAGCCAGAGAGAGTGCCAGGGTGCCCTGGTCTGAGCTGGCATCCCCATGTCTTCTGTGTCCGAGGGCAGCATGGTTTCTCGTGCAGTGCTCAGACACAGCCTGCCCTAGTCCTACCAGCTCACAGCAGCACCTGCTCTCCTTGGCAGCTATGGCCATGACAACCCCAGAGAAGCAGCTTCAGGGACCGAGTCAGATTCTGTTTTGTCTACATGCCTCTGCCGGGTGCCGGTATTGAGGCACCCAGGGAGCTGTTACTGGCGTGGAAATAGGTGATGCTGCTACCTCTGCTGCTGCACTCACAGCCACACTTGATACACGATGACACCTTGCTTGTTTGGAAACATCTAAACATCTAGTAGATGACTTGCAGGCTGTTGGCTACCAGTTTCCTGTCTGAGGTGTATATGTTAACTTCGTGATCAGTTTGTATGTTTGGGACTCTTGTCCTATGTAAAGTTAAGGTGggccgggtgcagtggctcacgcctgtaatcctaacactgggaggccgaggcgggtggatcacctgatggtgaaacctcatctctactgaaaatacaaaaattagctgagtggtgacacacgcctgtaatcccagctacttggtaggcttgaacccaggaggcagagattgcagtgagccgagctgcaccactgtgctccagcctgggtgacagcgagactcagtctcaaaaaaaGTTGTACAAGGTGGATGGTTGGAAGCTTGAGCCTAGGCTCGAATCCCTCTCACGTGAGAGGGCCTGAAGATTTCTGGTGGATTCCAACCTGGCTGAAGACTGGCCGTGGGGGGTGCAGGGGTCTCCAGCGCTCTGCCCTCCAGCCTGCTTCCTCCCTGCCCACACCGCACTAGGGGAAGGGCCTTTCCTGCTGCCTGCGGGGCCGCACCTGGAGTAGGTAATGCCATGTGGTGACGTGAATGGAGCAGAGGTCTGTGCCCCATCACACCGCCTTGCTGTTTTTACTGTGGGACAAAAGCACTCTGATCTGCGTGTTCCGGGGGCCCTCCTACCAGCCGACTTGACGGGaagtcagggttcaggtatcatctgtgcacctggggcggggtagtctgcactgaacctgccagagtcccctcctcatttcactgaaagtcacagtctccagggctgtGTTGCTAACCTTACGTTCTCTCCGTTTGCTTAATCTATTAAGAGCCCTAACAGGAGAGGATGGGCTTTCTCTGTTGTCTGGGGCCCTGCTGTTGGCCGGTGCTCTTAGCAAGAGGTCATTTTTCTAGGTTGCGCTGGGACATTGTGAGTTTGGTGAGGGTCATGGATGtgggctgggctgggctgggctgggccgggctgCCTGCTGCCTGCTGCTCCCCTACCTGAAATGCAGCTAGTGCGGCTCTGCCCTTCCTGGGGCTGAGGAAGGCTTCTGCAGGATAGCTGGGGGGCTGGGCAGGTGGGTGAGGCAGCCTCCCTGCTGACACTCAGTCCTTGTAGCTGGAGCAAGATCTCCTGATCCAGGTACGGGCCTGTCTGCTCCAAGAAAGACTCTGCCACCAGATGCAAAGGGGCCCTTTGTTTTAACTTAGTCCCTGGGGACCGCCTGATTCAGCACCTGTCGGCCCAGGATACCCCGCTGGTGGGGACAAGTGCCTGAGTGTGGGCCGTGCCCGAGTGTGGCCATCCCTGAGTGGGGCCGTCCTGACTAGGAAGTGGCTTTTCAGTTGTGATGTGTGGGCCTGACCTAGGGGGCGCTGTGGAACCCGGGCTGGAACCAGCCCTCTGTGCCAGGCCGCAGACAGGTTCCGCCGGCCCTGAGGGGCAGCTGCCATGGCGTGGGTCACTGGGAGCTGAGAGGAAGGGCCCCCACCGCACCTCAGGCAAAGCGGCTCTGGGAACACCTTGATTTCGTCCATGTGAGCCGTCCCAGGGAGGGCAGCCAAGCTGTGAAGCCTGAGAAACTGACCTGTGTGCCACGAGCTTGTGGTCTGCTGCCCGGTGGAGGAAGTGCAGGTGCGCCCAGGCTCCTCATTCCGTTTTGCAGGATTCCTTCGGGGTGTGAGCATTTCCTATTCAGCCTGTCGCCCCCGGGGAGCACGGGCTGGCTCTGTGGTGCCCGTGGCCTTTTGTAGAAGCGTTGGTTTTACGGCAGGTTCATCTCTGGGGCAGCCTCCCACAGTGGGTGGGGCTTTGCCAGCAGTGCCCACGGGGGTCATGGGGCCAGGCGCGCTCCGGCGCCTGCAGAACTGATCGGGGATAGTCTCAGGAGGCGCTAGTCACGTGCCCCGGTGATCGGGGATAGTCTCAGAAGGCGCTAGTCTCCTGCCCCGGTGATCGGGGATAGTCTCAGGAGGCACGAGTCGCCTGCCTCGGTGATGCACCGTTTCTCACACCGGCTGCTCTGGCCCGAGCTAAAGGGGAAGACGTGTGCGGATAGGAGCTGCACACAATTTTCCTCCATGTATTGTTTATTTTGCTTTTTCTTTTGGCTAGACATTAGGAATTTCAGTTTTCCCAAGTTGTATTTTTCCTTTTCTATTTTAAAATTATCATGCAGGgctgggtgaggtcgctcacgcctatagtctcaaaactttgggaggctgaggggggaggatggcatgagcccaggagtttaaggctgcagtgagccgagatcgctccactgtcctccagcctgcatgacagagcgagaccctatctcaggaaaaaaaaaaacaaaaCTATTATGCAGTAGTTTCGACCCTGGAAGACGAGTGTGCATCTTTGAGTTGTAACACGTGTACCTCGCCCATCCAGGCGTAGTTTCATTTGGAATCTGGTTATCCTGTAGTTGCTTTGTTAAAAATATATGTAATTGCAAATCATTT