Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL31
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L31
Also known as L31
Coordinate chr2:101002289-101019724
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein belongs to the L31E family of ribosomal proteins. It is located in the cytoplasm. Higher levels of expression of this gene in familial adenomatous polyps compared to matched normal tissues have been observed. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPL31

Retroname Coord Strand Genomic Region ENSG
RPL31P45 chr10:22266965-22267343 + Intergenic
ENSG00000233318 UCSC
RPL31P44 chr10:52389064-52389512 - Intergenic
ENSG00000213657 UCSC
RPL31P11 chr1:161684791-161685236 - Intergenic
ENSG00000213075 UCSC
RPL31P85 chr11:74919581-74920002 + Intragenic
ENSG00000241170 UCSC
RPL31P49 chr12:110460964-110461401 + Intragenic
ENSG00000241680 UCSC
RPL31P52 chr12:120450399-120450802 - Intragenic
ENSG00000219355 UCSC
RPL31P13 chr1:213428694-213429097 - Intergenic
ENSG00000228646 UCSC
RPL31P87 chr12:53632738-53633178 - Intergenic
ENSG00000213470 UCSC
RPL31P86 chr12:6409595-6410037 - Intergenic
ENSG00000213942 UCSC
RPL31P88 chr12:73648639-73649086 + Intergenic
ENSG00000243164 UCSC
RPL31P89 chr12:99936893-99937269 - Intragenic
N/A UCSC
RPL31P53 chr13:57391283-57391428 - Intergenic
ENSG00000225352 UCSC
RPL31P54 chr13:78422817-78423166 + Intergenic
ENSG00000229865 UCSC
RPL31P90 chr14:58794629-58795071 + Intergenic
ENSG00000213598 UCSC
RPL31P91 chr14:63568010-63568308 + Intergenic
ENSG00000205767 UCSC
RPL31P92 chr15:92719430-92719782 + Intergenic
ENSG00000240484 UCSC
RPL31P93 chr15:96448249-96448502 + Intergenic
ENSG00000242295 UCSC
RPL31P56 chr16:55352720-55353020 - Intergenic
ENSG00000240760 UCSC
RPL31P12 chr1:72301445-72301871 + Intergenic
ENSG00000227207 UCSC
RPL31P58 chr17:28802444-28802824 + Intragenic
ENSG00000243053 UCSC
RPL31P94 chr17:32413309-32413557 - Intergenic
N/A UCSC
RPL31P57 chr17:64308275-64308716 - Intergenic
ENSG00000256358 UCSC
RPL31P7 chr17:80602511-80602952 - Intragenic
ENSG00000232083 UCSC
RPL31P59 chr18:3377925-3378204 - Intergenic
ENSG00000240364 UCSC
RPL31P9 chr18:67137582-67137726 - Intergenic
ENSG00000264054 UCSC
RPL31P60 chr19:32963628-32963865 + Intragenic
ENSG00000239988 UCSC
RPL31P61 chr19:36901718-36902158 + Intragenic
ENSG00000243297 UCSC
RPL31P3 chr20:31311307-31311561 - Intergenic
ENSG00000237929 UCSC
RPL31P2 chr20:33752127-33752567 - Intragenic
ENSG00000230837 UCSC
RPL31P1 chr21:43551201-43551645 + Intragenic
ENSG00000214326 UCSC
RPL31P95 chr21:5986926-5987370 - Intergenic
N/A UCSC
RPL31P96 chr22:17093614-17093939 - Intragenic
ENSG00000235328 UCSC
RPL31P17 chr2:222726429-222726872 + Intergenic
ENSG00000235225 UCSC
RPL31P16 chr2:37194378-37194742 - Intragenic
ENSG00000233159 UCSC
RPL31P30 chr2:61856784-61857062 + Intergenic
ENSG00000230702 UCSC
RPL31P66 chr3:136205493-136205933 - Intergenic
ENSG00000244740 UCSC
RPL31P67 chr3:141258571-141258792 + Intragenic
ENSG00000241400 UCSC
RPL31P64 chr3:17465161-17465548 + Intragenic
ENSG00000227309 UCSC
RPL31P65 chr3:32507930-32508362 + Intergenic
ENSG00000213849 UCSC
RPL31P71 chr4:147425929-147426356 - Intergenic
ENSG00000241281 UCSC
RPL31P70 chr4:88163573-88164010 + Intragenic
ENSG00000241853 UCSC
RPL31P73 chr5:134863053-134863455 - Intergenic
ENSG00000270892 UCSC
RPL31P72 chr5:60429862-60430302 - Intragenic
ENSG00000213896 UCSC
RPL31P75 chr6:143327247-143327695 + Intragenic
ENSG00000216642 UCSC
RPL31P28 chr6:53354664-53355102 + Intergenic
ENSG00000219863 UCSC
RPL31P80 chr7:122234527-122234948 + Intergenic
ENSG00000213302 UCSC
RPL31P81 chr7:125300462-125300901 - Intergenic
ENSG00000213291 UCSC
RPL31P82 chr7:131520113-131520505 + Intragenic
ENSG00000224545 UCSC
RPL31P77 chr7:21400944-21401618 - Intergenic
ENSG00000229949 UCSC
RPL31P78 chr7:23365795-23365975 + Intragenic
ENSG00000232627 UCSC
RPL31P35 chr7:54656330-54656775 + Intergenic
ENSG00000232612 UCSC
RPL31P76 chr7:6490740-6491016 - Intergenic
ENSG00000231359 UCSC
RPL31P79 chr7:66914575-66914983 + Intergenic
ENSG00000179131 UCSC
RPL31P41 chr8:65155401-65155777 + Intergenic
ENSG00000239261 UCSC
RPL31P83 chr8:94565008-94565757 + Intergenic
ENSG00000253175 UCSC
RPL31P84 chr9:108040189-108040630 + Intergenic
ENSG00000213557 UCSC
RPL31P63 chrX:68600071-68600517 + Intergenic
ENSG00000236735 UCSC
RPL31P50 chr12:31597167-31597436 - Intergenic
ENSG00000231788 UCSC
RPL31P69 chr4:33968146-33968450 + Intergenic
ENSG00000239983 UCSC
RPL31P47 chr11:123051194-123051363 + Intergenic
ENSG00000233541 UCSC
RPL31P68 chr3:195349716-195349882 + Intragenic
ENSG00000227433 UCSC
RPL31P20 chr3:24430801-24431034 + Intragenic
ENSG00000229756 UCSC
RPL31P74 chr6:85257327-85257564 + Intergenic
ENSG00000216902 UCSC
RPL31P40 chr8:68293551-68293840 - Intergenic
ENSG00000253964 UCSC

Expression

Transcript Sequences

>NM_000993.5
CTTCCTTTCCAACTTGGACGCTGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAAAAGGGCCGTTCTGCCATCAACGAAGTGGTAACCCGAGAATACACCATCAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCACCTCGGGCACTCAAAGAGATTCGGAAATTTGCCATGAAGGAGATGGGAACTCCAGATGTGCGCATTGACACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGAATAAGGAATGTGCCATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCACCAAATAAGCTATATACTTTGGTTACCTATGTACCTGTTACCACTTTCAAAAATCTACAGACAGTCAATGTGGATGAGAACTAATCGCTGATCGTCAGATCAAATAAAGTTATAAAATTGCCTTCATGTTTTTGTTCTTTTTAGTTGCAACATAATGTACTTGTATACCCTATCCTAATTATGGGATCATTTGAAGAGCTTTTCCCAAATTGATGGCCTGTGCTGCCTTCTCCCCATCCCCTGGGGTTTTAaagtgatttcaaactgcaacctagttttagaaccactgTTCTGGGTAGTTGGGATACTGAAGGCATATTGTTAATTATTCTACTTGTATGTTTTGCTAATTCTAAGATAAGCATTTTTCCAGAAACCAGGATGTAGAATCCAGTTGCCATTGACATCTTAACATTTTAGGAAACAACTTTAAAATGAtatactatctatctatctatctGTAGCATCTTAAAGGTAATGAAATTAATGTGGCAGTAGGTCTTTTAAGCTTCTGCCTACATCCATATTGAGTATAGTTGTTGTCTTCTAAAATAATTAATTGATTTTTGGTGAGATAACCAGATTCATATTTTAAGCCTTTTGTAATGGCCCCGTGGTACCTGGAGTCAAGGTTCAGAAGTAAAAAGTTCCTTAAGGTATCAATAACAAAAATTTGTATTAATAGTTCAGTCCTAAAGCAGTGTTGCTGAGATTATGTTTCACCAGCATTTACAAGCTGTATGTTAAATGCTGCCATAAAGAGGTCTCTGAAGCCGTAGGGCACACCCAAGGCAGGGCTGAGAAGTACCTAGTAGTGTTGCACCACCCAAAAACCATGGATGGGCAGCAGCAACATCTCCAGCTTACCCATTCACTGCCACAGTCTACAGCTTAAGACACTTAACTACAAGGTAAAAGAAAAGGACCAAGTAAATACAAAAAGTTTCTTATTAAAAAACTTGGAAGCCAA
>NM_001098577.3
CTTCCTTTCCAACTTGGACGCTGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAAAAGGGCCGTTCTGCCATCAACGAAGTGGTAACCCGAGAATACACCATCAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCACCTCGGGCACTCAAAGAGATTCGGAAATTTGCCATGAAGGAGATGGGAACTCCAGATGTGCGCATTGACACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGAATAAGGAATGTGCCATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCACCAAATAAGCTATATACTTTGGTTACCTATGTACCTGTTACCACTTTCAAAAtttctgtgctaaacagtgttacagtcgccaagagcccataaagggagccctcctggaagtggatgaggccttgggtctcggctcttcattgcttcctgagctgcagcagatgcctttacaaccaagctcaccgaggacgtctgtctcccatattaccctggcagagggccaggcctgttctacacggccggggtttcaacaaggtactgatgtcttctgcccttgcctcttcgacaggcaagtaataagacttaagtgaagagaattctttaggcacacaaattcacatttgatgtaatctcattatacttcctgatctgtgattgaaaactttcatttcgtaactagtatgtctgtcccacctttaaaaagtttttcattatgaaagtaagtatttgttagaattaagtctatttaaatgaaaaaaacttagatatgagtctgcatggcctcaggaaaatgatgttttaaaatagagattttaggttgtctgcactctagcttttttgtcgttttcttaaggcttttttaactgcatcaaaaattcagatacgaaacatacactaaaaaataatacatcatatcttaatttccactgaacttgatttaaattcagagttacacagtatgaatatcacaatcagatatgttcaaaaaggtctgaacaattgattttctgaaaccatgaaggactacaaatgcttctaataaatcaatgtaattaaaa
>NM_001099693.2
CTTCCTTTCCAACTTGGACGCTGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAAAAGGGCCGTTCTGCCATCAACGAAGTGGTAACCCGAGAATACACCATCAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCACCTCGGGCACTCAAAGAGATTCGGAAATTTGCCATGAAGGAGATGGGAACTCCAGATGTGCGCATTGACACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGAATAAGGAATGTGCCATACCGAATCCGTGTGCGGCTGTCCAGAAAACGTAATGAGGATGAAGATTCACCAAATAAGCTATATACTTTGGTTACCTATGTACCTGTTACCACTTTCAAAAGTAAGTTCTCCATCCCATAAAGCCATTTAAATTCATTAGAAAAATGTCCTTACCTCTTAAAATGTGAATTCATCTGTTAAGCTAGGGGTGACACACGTCATTGTACCCTTTTTAAATTGTTGGTGTGGGAAGATGCTAAAGAATGCAAAACTGATCCATATCTGGGATGTAAAAAGGTTGTGGAAAATAGAATGCCCAGACCCGTCTACAAAAGGTTTTTAGAGTTGAAATATGAAATGTGATGTGGGTATGGAAATTGACTGTTACTTCCTTTACAGATCTACAGACAGTCAATGTGGATGAGAACTAATCGCTGATCGTCAGATCAAATAAAGTTATAAAATTGC