Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPL41
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein L41
Also known as L41
Coordinate chr12:56116633-56117967
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 60S subunit. The protein, which shares sequence similarity with the yeast ribosomal protein YL41, belongs to the L41E family of ribosomal proteins. It is located in the cytoplasm. The protein can interact with the beta subunit of protein kinase CKII and can stimulate the phosphorylation of DNA topoisomerase II-alpha by CKII. Two alternative splice variants have been identified, both encoding the same protein. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPL41

Retroname Coord Strand Genomic Region ENSG
RPL41P17 chr10:91110869-91111093 - Intergenic
N/A UCSC
RPL41P7 chr1:147501060-147501477 + Intergenic
N/A UCSC
RPL41P18 chr12:38466647-38467028 - Intergenic
N/A UCSC
RPL41P8 chr1:242974964-242975380 + Intergenic
ENSG00000230199 UCSC
RPL41P5 chr12:93083292-93083716 - Intergenic
ENSG00000256393 UCSC
RPL41P19 chr14:74003355-74003777 + Intragenic
ENSG00000279461 UCSC
RPL41P2 chr15:28315652-28316059 + Intragenic
ENSG00000256338 UCSC
RPL41P20 chr16:30587621-30588031 + Intergenic
ENSG00000261588 UCSC
RPL41P6 chr1:63244073-63244492 + Intergenic
N/A UCSC
RPL41P21 chr17:31034277-31034693 - Intragenic
ENSG00000266865 UCSC
RPL41P22 chr18:5232788-5233215 - Intergenic
N/A UCSC
RPL41P1 chr20:21755229-21755644 + Intergenic
ENSG00000227063 UCSC
RPL41P10 chr2:149596428-149596849 - Intergenic
N/A UCSC
RPL41P23 chr22:35838274-35838697 - Intragenic
N/A UCSC
RPL41P9 chr2:66881092-66881224 - Intergenic
ENSG00000230355 UCSC
RPL41P11 chr4:118459925-118460341 - Intergenic
ENSG00000273716 UCSC
RPL41P12 chr5:55944615-55945041 + Intragenic
ENSG00000264281 UCSC
RPL41P13 chr7:137513818-137514241 + Intragenic
ENSG00000279483 UCSC
RPL41P14 chr7:140491513-140491861 + Intergenic
N/A UCSC
RPL41P16 chr9:89709733-89710154 + Intergenic
N/A UCSC
RPL41P15 chr9:9276487-9276724 - Intragenic
N/A UCSC
RPL41P24 chrY:24362035-24362449 - Intergenic
ENSG00000279274 UCSC
RPL41P25 chrY:25307688-25308102 + Intergenic
ENSG00000279115 UCSC

Expression

Transcript Sequences

>NM_001035267.2
CTCTCGGCCTTAGCGCCATTTTTTTGGGTGAGTGTTTTTTGGTTCCTGCGTTGGGATTCCGTGTACAATCCATAGACATCTGACCTCGGCACTTAGCATCATCACAGCAAACTAACTGTAGCCTTTCTCTCTTTCCCTGTAGAAACCTCTGCGCCATGAGAGCCAAGTGGAGGAAGAAGCGAATGCGCAGGCTGAAGCGCAAAAGAAGAAAGATGAGGCAGAGGTCCAAGTAAACCGCTAGCTTGTTGCACCGTGGAGGCCACAGGAGCAGAAACATGGAATGCCAGACGCTGGGGATGCTGGTACAAGTTGTGGGACTGCATGCTACTGTCTAGAGCTTGTCTCAATGGATCTAGAACTTCATCGCCCTCTGATCGCCGATCACCTCTGAGACCCACCTTGCTCATAAACAAAATGCCCATGTTGGTCCTCTGCCCTGGACCTGTGACATTCTGGACTATTTCTGTGTTTATTTGTGGCCGAGTGTAACAACCATATAATAAATCACCTCTTCCGCTGTTTTAGCTGAAGAATTAAATCATCTTGTCTATTATGTTTTTTATGGTTCCATCGGGTGGGGGTTTTCTGTCATTAGAGTTTGCCCTGTCACTACCTGTGCTATGGAGGGTATCAAAGCTATAAAGGCAACAGCCCGGGTTACGTGGTGTGGTTTGCA
>NM_021104.2
CTCTCGGCCTTAGCGCCATTTTTTTGGAAACCTCTGCGCCATGAGAGCCAAGTGGAGGAAGAAGCGAATGCGCAGGCTGAAGCGCAAAAGAAGAAAGATGAGGCAGAGGTCCAAGTAAACCGCTAGCTTGTTGCACCGTGGAGGCCACAGGAGCAGAAACATGGAATGCCAGACGCTGGGGATGCTGGTACAAGTTGTGGGACTGCATGCTACTGTCTAGAGCTTGTCTCAATGGATCTAGAACTTCATCGCCCTCTGATCGCCGATCACCTCTGAGACCCACCTTGCTCATAAACAAAATGCCCATGTTGGTCCTCTGCCCTGGACCTGTGACATTCTGGACTATTTCTGTGTTTATTTGTGGCCGAGTGTAACAACCATATAATAAATCACCTCTTCCGCTGTTTTAGCTGAAGAATTAAATCATCTTGTCTATTATGTTTTTTATGGTTCCATCGGGTGGGGGTTTTCTGTCATTAGAGTTTGCCCTGTCACTACCTGTGCTATGGAGGGTATCAAAGCTATAAAGGCAACAGCCCGGGTTACGTGGTGTGGTTTGCA