Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name RPS12
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name ribosomal protein S12
Also known as S12
Coordinate chr6:132814569-132817564
Strand +
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S12E family of ribosomal proteins. It is located in the cytoplasm. Increased expression of this gene in colorectal cancers compared to matched normal colonic mucosa has been observed. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from RPS12

Retroname Coord Strand Genomic Region ENSG
RPS12P16 chr10:34675612-34676040 - Intragenic
ENSG00000215184 UCSC
RPS12P17 chr10:69161553-69161913 - Intragenic
ENSG00000233163 UCSC
RPS12P18 chr10:79544086-79544378 + Intergenic
ENSG00000232965 UCSC
RPS12P2 chr10:80215828-80216120 - Intergenic
ENSG00000234319 UCSC
RPS12P21 chr11:112218336-112218737 + Intergenic
ENSG00000243930 UCSC
RPS12P44 chr11:74745693-74746194 - Intergenic
ENSG00000227615 UCSC
RPS12P23 chr13:21094294-21094795 - Intergenic
ENSG00000180172 UCSC
RPS12P24 chr13:37220835-37221273 - Intergenic
ENSG00000230283 UCSC
RPS12P45 chr14:72963833-72964063 - Intergenic
ENSG00000239544 UCSC
RPS12P46 chr15:79751709-79752104 - Intergenic
ENSG00000213527 UCSC
RPS12P26 chr15:90206532-90206988 + Intragenic
ENSG00000225193 UCSC
RPS12P27 chr16:68209380-68209778 + Intragenic
ENSG00000240435 UCSC
RPS12P28 chr17:28655547-28655994 + Intragenic
ENSG00000240494 UCSC
RPS12P47 chr17:4704798-4705299 - Intergenic
ENSG00000213939 UCSC
RPS12P48 chr17:58899442-58899693 + Intragenic
ENSG00000241462 UCSC
RPS12P49 chr19:11523355-11523853 + Intragenic
ENSG00000213303 UCSC
RPS12P31 chr19:32636059-32636254 + Intragenic
ENSG00000242325 UCSC
RPS12P4 chr2:41850180-41850683 - Intergenic
ENSG00000236533 UCSC
RPS12P3 chr2:60938176-60938656 - Intergenic
ENSG00000232713 UCSC
RPS12P33 chr3:158496601-158496802 + Intragenic
ENSG00000243314 UCSC
RPS12P5 chr3:29390827-29391101 + Intragenic
ENSG00000226216 UCSC
RPS12P32 chr3:78758978-78759234 + Intragenic
ENSG00000240752 UCSC
RPS12P35 chr4:112116489-112116942 - Intergenic
ENSG00000240459 UCSC
RPS12P34 chr4:61775426-61775881 - Intragenic
ENSG00000226439 UCSC
RPS12P10 chr5:142566686-142566852 + Intergenic
ENSG00000225147 UCSC
RPS12P36 chr5:81242328-81242594 - Intragenic
ENSG00000248794 UCSC
RPS12P40 chr6:108856329-108856770 - Intragenic
ENSG00000218872 UCSC
RPS12P41 chr6:151225527-151226029 - Intergenic
ENSG00000213087 UCSC
RPS12P37 chr6:17953628-17953951 + Intragenic
ENSG00000220920 UCSC
RPS12P38 chr6:35070849-35071049 - Intragenic
ENSG00000273870 UCSC
RPS12P39 chr6:47562630-47563036 + Intragenic
ENSG00000216813 UCSC
RPS12P15 chr8:102503794-102504125 + Intergenic
ENSG00000240724 UCSC
RPS12P42 chr9:10532222-10532419 + Intragenic
ENSG00000234360 UCSC
RPS12P43 chr9:72470372-72471095 + Intergenic
ENSG00000225947 UCSC

Expression

Transcript Sequences

>NM_001016.4
CTCTTTCCCTGCCGCCGCCGAGTCGCGCGGAGGCGGAGGCTTGGGTGCGTTCAAGATTCAACTTCACCCGTAACCCACCGCCATGGCCGAGGAAGGCATTGCTGCTGGAGGTGTAATGGACGTTAATACTGCTTTACAAGAGGTTCTGAAGACTGCCCTCATCCACGATGGCCTAGCACGTGGAATTCGCGAAGCTGCCAAAGCCTTAGACAAGCGCCAAGCCCATCTTTGTGTGCTTGCATCCAACTGTGATGAGCCTATGTATGTCAAGTTGGTGGAGGCCCTTTGTGCTGAACACCAAATCAACCTAATTAAGGTTGATGACAACAAGAAACTAGGAGAATGGGTAGGCCTTTGTAAAATTGACAGAGAGGGGAAACCCCGTAAAGTGGTTGGTTGCAGTTGTGTAGTAGTTAAGGACTATGGCAAGGAGTCTCAGGCCAAGGATGTCATTGAAGAGTATTTCAAATGCAAGAAATGAAGAAATAAATCTTTGGCTCACA