Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name TRAPPC2
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name trafficking protein particle complex subunit 2
Also known as MIP2A|SEDL|SEDT|TRAPPC2P1|TRS20|ZNF547L|hYP38334
Coordinate chrX:13712243-13734633
Strand -
Gene summary The protein encoded by this gene is thought to be part of a large multi-subunit complex involved in the targeting and fusion of endoplasmic reticulum-to-Golgi transport vesicles with their acceptor compartment. In addition, the encoded protein can bind c-myc promoter-binding protein 1 and block its transcriptional repression capability. Mutations in this gene are a cause of spondyloepiphyseal dysplasia tarda (SEDT). A processed pseudogene of this gene is located on chromosome 19, and other pseudogenes are found on chromosomes 8 and Y. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Mar 2010]

Retrocopy(s) from TRAPPC2

Retroname Coord Strand Genomic Region ENSG
TRAPPC2P3 chr19:57364746-57367414 + Intergenic
N/A UCSC
TRAPPC2P2 chr8:71448704-71449246 - Intragenic
ENSG00000253124 UCSC

Expression

Transcript Sequences

>NM_014563.6
GCGAGAACTGCTTCGGCGTTCTGGCTACAGGTTCGGGGCGCGGGTCTCTTCCGCGGAAACTGACATTGCGTTTCCGTTGTCGGCCTCCCACTGCAGGAGCCATATATTGAAGACCATGTCTGGGAGCTTCTACTTTGTAATTGTTGGCCACCATGATAATCCAGTTTTTGAAATGGAGTTTTTGCCAGCTGGGAAGGCAGAATCCAAAGACGACCATCGTCATCTGAACCAGTTCATAGCTCATGCTGCTCTCGACCTCGTAGATGAGAACATGTGGCTATCGAACAACATGTACTTGAAAACTGTGGACAAGTTCAACGAGTGGTTTGTGTCGGCATTTGTCACTGCGGGGCATATGAGGTTTATTATGCTTCATGACATAAGACAAGAAGATGGAATAAAGAACTTCTTTACTGATGTTTATGATTTATATATAAAGTTTTCAATGAATCCATTTTATGAACCCAATTCTCCTATTCGATCAAGTGCATTTGACAGAAAAGTTCAGTTTCTTGGGAAGAAACACCTTTTAAGCTGAATGCAGAAAATTCCAAAATAAATGATGTCACCACAATGGTGTATACTCAGGAATGTGTACATTGTAAGTTACTTGATTAAATAGCCTGGAAAACTTTTGTGTATTCTCAGCTTATCTAAACCTAATGAAATTCCTTTTATATTTAAAAATAGTACATTCTGTCTCATGTCACGTATCAATAGATCAATTGGTATTTCCTTGTGAACAGTGTTATTTATAAAGAGTTCATTATCAATAATCATGttttttttttttttttttttctgatacagagtctcactctgttgccaggctggagtgcagtggcgcaatcttggctcactgcaacctccgcctcccaggttcaggcgattctcctgcctcagcctccaagtagctgggactacaggcgcgtgccaccacgcccggctaatttttgtatttttagtagagacagggtttcaccatattggtcaggctggtcttgaactcctgacctcgtgatctgcccgccttggcctcccaaagtactgggattacaggcgtgagccaccgtgcccaaccATGAAATATTTTTACTTAAAAATTGGGAATAAGCTCGCtttttttttttttgagatggagtcttgctcctgttgtgcaggctgtagtgcagtggcacgatcttggctcactgcaacctccacctcccgggttcaagcaattctccttcttcagcctcccgagtagctgagattataggcgtgcaccaccacacctggctaatttttgtatttttagtagagacagggtttcaccatattggtcaggctggtcttgaactcctgacctcgtgatccacccacctcaggaagtgctgggattacaggcgtgtgagccaccacgcccggccATGAAATATTTTTACTTAAAAATTGGGAATAAGCTTTTTGGTTTTTTGTGGGtttttgtttttgttttttgttttttgtttttttgagatggagtcttgctcctgttgtgcaggctggagtgcagtggcacagtcttggctcactgcaacctccacctcctgggttcaagcaattctccttcttcagcctcccgagtagctgggattacaggcatgcaccaccacacctggctaatttttgtgtttttagtagagacggggtttcgctattttggccgggctggtttcaaactcctgacctcagttgatccacccgcctcagcctcccaaagtgctaggattacaggcatgaaccaccgtgcccggccAGGAATAAGCTTTTGACTTACCCAATTCAGATAGGTTGATCTTTGGGGttttttttttttttttgagatggagtttcgctctgttgtccaggctggagtgcaatggcagttgtttcaccgtaacctctgcctcctgacttcaagcaattctcctgcctcagcctcccaaagtgctgggattacaggtgtgagccaccgtgcccggcCCAGATAGGTTGATCTTAATGTAACAACCCAAAAATAAATGTCATAGTCAAGATTTGGTAGATAAATTTAAAATTAAAATATTCTGCAGTTGGGAGTGAAATGTGATAGCACATACGTTGACATTATGCATTTAGAGATGTTATAAAAATGTATAGGCAGTATACACAGCACTACTCAAGAAGCCAAAGAAACACTTGTGCAGTGCTAAGTGTCACATGTCTGCTTCCACCAGAGGCTAGGAATAGTGATCCTGCTATAATGTGAGAACCCAAATCATGTTTATAAAATAGGACGCTGGGAGCAGTTGCAGGCCACAGTGAAGTGTGTTGCTTCTGTCACTTTATATTCTTATATTTCCTTTCCCTCAGACAGTAAACTGTTGATACTCGTACTTGTAAAAAATTGTAAGGCAATTTTTAGTATTGTTGTCAAAGAAAAGCTTGGATTACATTAACATTTGTATTCAGTCTTTTAGGTGATACACCAGAGGGGGCTGGGAATTGTCTCTTTGTTCCTATAAGTAGATCTTAATGTAAAATAGTAAATGTCCATTGAAAAGCAAGTAATACAGCCTGTGCTAATTGGGAGCACTTGAACAATTTTGTTCCATTCTGAGTAACTTTTGAGCAAGTAATTCTAAGCTTTGTCTTGTATCCTTGTGTGAAATTGCATAATTTTTACCCTATTTGATTTCTTAAATAAAGATGTTTGCTCAA