Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Chp1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name calcineurin-like EF-hand protein 1
Also known as Chp|Wrch2
Coordinate chr3:111354506-111389998
Strand +
Gene summary Enables calcium ion binding activity; kinase binding activity; and microtubule binding activity. Involved in several processes, including microtubule cytoskeleton organization; protein stabilization; and regulation of protein modification process. Located in several cellular components, including Golgi membrane; microtubule cytoskeleton; and transport vesicle. Human ortholog(s) of this gene implicated in spastic ataxia. Orthologous to human CHP1 (calcineurin like EF-hand protein 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Chp1

Retroname Coord Strand Genomic Region ENSG
Chp1P1 chr4:6475469-6478177 - Intergenic
 N/A UCSC
Chp1P2 chr5:70747538-70749972 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_024139.2
CCCTAGTTTCCCTCCCCGGGCCGCAGGAGAAACAGTGCCCTCTCCCTTCTTGACCCCTGGCCCTTCCCTCCCTTATTCCCTCTTgccgccgctgcttctggcgctgccgctcccgGAGGAGCTCCCGTCACGGTGATGGGGTCTCGGGCCTCCACGTTACTGCGGGACGAAGAGCTCGAGGAGATCAAGAAGGAGACTGGCTTTTCCCACAGTCAGATCACACGCCTGTACAGCCGCTTCACCAGCCTGGACAAAGGGGAGAACGGAACTCTCAGCCGGGAAGATTTCCAGAGGATTCCAGAACTTGCCATCAACCCACTGGGGGACCGGATCATCAATGCCTTCTTCTCAGAGGGAGAGGATCAGGTAAACTTCCGAGGATTCATGAGAACTTTGGCTCATTTCCGACCCATTGAGGATAACGAAAAGAGCAAAGATGTGAATGGACCGGAACCCCTCAACAGCCGGAGCAACAAACTGCACTTTGCTTTCAGACTTTATGACTTGGATAAAGATGACAAGATCTCCCGCGATGAGCTGTTACAGGTACTGCGAATGATGGTCGGAGTGAATATCTCAGATGAGCAGCTGGGCAGTATTGCAGACAGGACCATCCAGGAGGCTGACCAAGATGGAGACAGTGCCATATCTTTTACAGAATTTGTTAAGGTTTTGGAGAAGGTGGATGTAGAACAGAAGATGAGCATCCGATTTCTTCACTAAAGGGCAGAGACCAAATTATTCTTGCTTTCTAGTATTTAAGAACTGAAACTTCCTTCTGTCCTCCAGCCCCACCCCATCCTGTCATCCCCCTTTCCCAGAATACTACAGCTCCTGCATGACAACCTGAAGTCTCTCCTGTCCATACAAACTTGCCTTTGGTGTATAAACAGGGCGTTACAGAATGGTACCCTGTCTATTTCTGTTCGGTATCCACCCATCAGTCTTTATTGTAAGTACCAACTTCCCCTGTTCTACTGCTCAGTGCCACGCATCCGTCCTGTCTGAGGAAAGAAACAGGGACTCATGTCAAGAACCAGCCAGCAAAGCTCCCACTAGATGGGACCATATCCATGCTGCCTTCCCTTCATCAGCCCTCCATCATGgtcctgtgtgctgtgtcctgtgtcctgtgtcTGTTTCTTCCTACCTCTCTGTCATCCAGCCTTCTCTCCATTCAGTCTTTCAGCTGTCCTCCTGTCGTTGAGATTCCCTGCATTCTACTTGACTCTGGGCTCTGCTGGTAAGCCTGTTTCTGATGTGGCAGGATAGTTAGTGGTCTGGTGATCTGTATCTACCTTCTGATGTGGGATATTGCCTATCCAGGAGCTATTGCTCTGTCGTCACAGGGCTTATGAGCAGACATGTTCTTAAAAGGTAGTCATGGTGAGGCTTGTAGAGCCATGTCTCCTAGGTGGCTTCCCAGGTCTCTCTACCTCTGACTTTTTATTTTCAAATATATTTATGTGGCTTTTCTGGGTACAGTGTTGACATTCAGAAAATAGTCTAATGCCTGCCAGTTTGCTTCTCTTTGGGACATTGTCACCACCCAAGCGGCTGTTCTGACAATATGGTAGAGGGCCTTCTTGTGTTTTCTGACAAGGATGGGCACCCTGGAGAGCTGCCCACATTTGCTCCACAGCATGGGTTATGCCTCAGTGTTCTGTACACTTGAAGATTCTTCACATTTCCAAACAGAAAGACTAGTGTTACAGAAGTGCCTGACTTACCTCAGTCCTAAAGAATTAGATTGTCCTCAGTGTCTTAAAGTTTTGCACAAAACTCTGAATGAATTTTATACTTGGCAAATTTTAATGCTGGAAGATGTATAGTCAGTTCATAATCCTGGTCCAGGCACTGTATGCATCGAATGTATTGTCTCATGAGCTTCCTAATGACACGACCTTCCTAGCTCCTTGTGAATACTATACTATGCAGATCCCTCAGAAGCATGGGACCTGGGACTGGTGGCACCAACTGAGGTGACATTCTCTGCCAATGTCAGCTTGATTTAGATGTCACTGAATCAAGCTGCTTCCGCCCTGTGTTCCTGTGAATCTGCTcttggctggctttctctggtgttgcctgcttgcttgcttgctttgttgcttTGGAAGGCTATCCAAGATATGTAAGCAATTCTTTAGGAAATAAATTGCTGTTAACCCAAACAAACAAAAACACTGCAGACGAGATGGGTAAAGGCGAGCAGTGGGGGCGTGGCTAGGACAGATGGCTAGGGTCTACATGAACTGGGGAATTCTTTATGAAATATGTCAGACTTTGTGATCAAATGATGTGATATAAGAATTGTATAAAGGGAATAATTGTCTGATACTTATCTGTTTGAGAAGTACTTCAGAAGCATCTTGATTTAATTATTTAAAGTTTCTAAGATTATGCCCCCCTTGGCTGTATAGCAAACTGTTTTTATCCACAGTTGTGCCTTATTGTCCCATTAAAATTGTATTCCTCAATCCACCAATAAATTAATTGTCATTAAAACAAAA