Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Uba52
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ubiquitin A-52 residue ribosomal protein fusion product 1
Also known as Rps27a|Ubb
Coordinate chr16:20668925-20671127
Strand +
Gene summary Predicted to enable protein tag and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Involved in response to insecticide. Located in cytoplasm and nucleus. Part of cytosolic large ribosomal subunit. Orthologous to human UBA52 (ubiquitin A-52 residue ribosomal protein fusion product 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Uba52

Retroname Coord Strand Genomic Region ENSG
Uba52P1 chr1:146906539-146906842 + Intergenic
N/A UCSC
Uba52P2 chr2:156756974-156757198 + Intergenic
N/A UCSC
Uba52P3 chr2:161600447-161600712 + Intergenic
N/A UCSC
Uba52P4 chr2:197157820-197158085 - Intergenic
N/A UCSC
Uba52P5 chr2:198086861-198087322 - Intergenic
N/A UCSC
Uba52P6 chr4:171061379-171061871 - Intergenic
N/A UCSC
Uba52P7 chr5:138042729-138042938 + Intergenic
N/A UCSC
Uba52P8 chr6:30566486-30566940 - Intergenic
N/A UCSC
Uba52P9 chr7:21993982-21994320 + Intergenic
N/A UCSC
Uba52P10 chr7:357195-357533 + Intergenic
N/A UCSC
Uba52P11 chr7:99346225-99346563 + Intergenic
N/A UCSC
Uba52P12 chr8:126807667-126807891 + Intergenic
N/A UCSC
Uba52P13 chr8:35423087-35423419 - Intergenic
N/A UCSC
Uba52P14 chr10:49699213-49699410 - Intergenic
N/A UCSC
Uba52P15 chr11:39083095-39083433 - Intergenic
N/A UCSC
Uba52P16 chr12:3361980-3362318 + Intergenic
N/A UCSC
Uba52P17 chr12:36640222-36642489 + Intergenic
N/A UCSC
Uba52P18 chr12:87920-88258 - Intergenic
N/A UCSC
Uba52P20 chr13:14315726-14315932 - Intergenic
N/A UCSC
Uba52P21 chr14:36865809-36866018 + Intergenic
N/A UCSC
Uba52P23 chrX:19107864-19108295 - Intragenic
N/A UCSC
Uba52P24 chrX:20081748-20082246 - Intergenic
N/A UCSC
Uba52P25 chrX:54028837-54029042 - Intergenic
N/A UCSC
Uba52P19 chr13:101355960-101356452 + Intergenic
N/A UCSC
Uba52P22 chr15:82529270-82529657 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_031687.3
CCGCTGTCCTCTTTCTCTTCAACGAGGCGGCCGAGCGGCAGACGCCAACATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAGCAGAGACTGATCTTTGCTGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTTCGCGGTGGCATCATCGAGCCGTCCCTTCGTCAGCTTGCCCAGAAGTACAACTGTGACAAGATGATCTGCCGCAAGTGCTACGCACGCCTGCACCCCCGTGCAGTCAACTGCCGCAAGAAGAAGTGCGGCCACACCAACAACCTGCGCCCCAAGAAGAAGGTCAAATAGAGCTGGGCCATACCTGGCCTGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCGACTGGAGCAGTAA
>XM_008771146.2
GCTCAGTGCGCAGGCGTCCTGAGAGGAGACTAGGGGGTTTCCGGTTCCGCTGTCCTCTTTCTCTTCAACGAGGCGGCCGAGCGGACGCCAACATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAGCAGAGACTGATCTTTGCTGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTTCGCGGTGGCATCATCGAGCCGTCCCTTCGTCAGCTTGCCCAGAAGTACAACTGTGACAAGATGATCTGCCGCAAGTGCTACGCACGCCTGCACCCCCGTGCAGTCAACTGCCGCAAGAAGAAGTGCGGCCACACCAACAACCTGCGCCCCAAGAAGAAGGTCAAATAGAGCTGGGCCATACCTGGCCTGTGACCCCGGGACCAAATAAAGTCCCCTTCCATCGACTGGAGCAGTAA