Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rplp0
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein lateral stalk subunit P0
Also known as Arbp
Coordinate chr12:46791528-46794797
Strand -
Gene summary Enables peptide binding activity. Involved in several processes, including cellular response to organonitrogen compound; cellular response to phorbol 13-acetate 12-myristate; and lactation. Located in membrane. Is active in synapse. Biomarker of Down syndrome. Orthologous to human RPLP0 (ribosomal protein lateral stalk subunit P0). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rplp0

Retroname Coord Strand Genomic Region ENSG
Rplp0P1 chr1:105944975-105945164 + Intragenic
N/A UCSC
Rplp0P2 chr1:173368546-173368843 - Intergenic
N/A UCSC
Rplp0P3 chr1:18181806-18182665 - Intergenic
N/A UCSC
Rplp0P4 chr1:190635067-190635768 - Intragenic
N/A UCSC
Rplp0P5 chr2:206902774-206903987 + Intergenic
N/A UCSC
Rplp0P6 chr4:125659034-125659261 - Intergenic
N/A UCSC
Rplp0P7 chr6:58563195-58563411 + Intergenic
N/A UCSC
Rplp0P8 chr8:127976555-127977633 + Intragenic
N/A UCSC
Rplp0P9 chr10:10885574-10886629 + Intergenic
N/A UCSC
Rplp0P10 chr10:1539696-1540326 - Intergenic
N/A UCSC
Rplp0P11 chr11:55131335-55132295 + Intergenic
N/A UCSC
Rplp0P12 chr11:71428030-71428830 + Intergenic
N/A UCSC
Rplp0P13 chr15:107906485-107907543 + Intergenic
N/A UCSC
Rplp0P14 chr17:51253158-51253411 - Intergenic
N/A UCSC
Rplp0P15 chr18:35044859-35046286 - Intergenic
N/A UCSC
Rplp0P16 chr18:41847656-41848105 + Intergenic
N/A UCSC
Rplp0P17 chr20:24575013-24575306 - Intergenic
N/A UCSC
Rplp0P18 chrX:115483235-115484249 - Intergenic
N/A UCSC
Rplp0P19 chrX:125068325-125068533 + Intragenic
N/A UCSC
Rplp0P20 chrX:147270934-147271992 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_022402.2
CTCTCGCCAGGCGTCCTCATTAGAGTGACATCGTCTTTAAACCCCGCGTGGCAATCCCTGACGCACCGCCGTGATGCCCAGGGAAGACAGGGCGACCTGGAAGTCCAACTACTTCCTTAAGATCATCCAACTTTTGGATGACTACCCAAAATGCTTCATTGTGGGAGCAGACAATGTGGGCTCCAAGCAGATGCAGCAGATCCGCATGTCCCTCCGCGGGAAGGCTGTGGTGCTGATGGGCAAGAACACCATGATGCGCAAGGCCATCCGGGGCCACCTGGAGAACAACCCCGCTCTGGAGAAGCTGCTGCCTCACATCCGGGGGAACGTGGGCTTTGTGTTCACCAAGGAGGACCTCACCGAGATTAGGGACATGCTGCTGGCCAATAAGGTGCCAGCTGCTGCCCGAGCCGGTGCCATCGCCCCGTGTGAGGTCACAGTACCTGCTCAGAACACCGGTCTGGGGCCCGAGAAGACCTCTTTCTTCCAAGCTTTGGGCATCACCACTAAAATCTCCAGAGGTACCATTGAAATCCTGAGCGATGTGCAGCTGATAAAGACTGGAGACAAGGTGGGAGCCAGCGAAGCCACACTGCTGAACATGTTGAACATCTCCCCCTTCTCCTTCGGGCTGATCATCCAGCAGGTGTTTGACAATGGCAGCATCTACAGCCCAGAGGTGCTGGACATCACAGAGCAGGCCCTGCACACTCGCTTCCTAGAGGGTGTCCGCAATGTGGCCAGCGTCTGTCTGCAGATTGGCTACCCGACTGTTGCCTCAGTGCCTCACTCCATCATCAATGGATACAAAAGGGTCCTGGCTTTGTCTGTGGAGACTGACTACACCTTCCCACTGGCTGAAAAGGTCAAGGCCTTCCTGGCCGATCCATCTGCATTtgcggctgcggcccctgtggctgctgccaccactgctgctcctgcagctgctgctgcCCCAGCCAAGGTCGAAGCAAAGGAAGAGTCGGAGGAATCCGATGAGGACATGGGATTCGGTCTCTTCGACTAAGCCCCTCACACCAAGTCAGCCTGCTTAATTTGAGAAAGATGGAAATAAAGGCTTACTTCTCTTAAA