Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SRSF3
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name serine and arginine rich splicing factor 3
Also known as SFRS3|SRp20
Coordinate chr6:36594362-36605600
Strand +
Gene summary The protein encoded by this gene is a member of the serine/arginine (SR)-rich family of pre-mRNA splicing factors, which constitute part of the spliceosome. Each of these factors contains an RNA recognition motif (RRM) for binding RNA and an RS domain for binding other proteins. The RS domain is rich in serine and arginine residues and facilitates interaction between different SR splicing factors. In addition to being critical for mRNA splicing, the SR proteins have also been shown to be involved in mRNA export from the nucleus and in translation. Two transcript variants, one protein-coding and the other non-coding, have been found for this gene. [provided by RefSeq, Sep 2010]

Retrocopy(s) from SRSF3

Retroname Coord Strand Genomic Region ENSG
SRSF3P1 chr11:18664929-18666479 + Intergenic
ENSG00000257043 UCSC
SRSF3P4 chr2:106252913-106253835 - Intergenic
ENSG00000224061 UCSC
SRSF3P5 chr2:107920454-107921367 - Intergenic
ENSG00000235325 UCSC
SRSF3P6 chr2:109732728-109733183 + Intergenic
ENSG00000233307 UCSC
SRSF3P7 chr7:117883434-117884169 + Intergenic
ENSG00000224136 UCSC
SRSF3P2 chr8:95946983-95948270 - Intergenic
ENSG00000254079 UCSC

Expression

Transcript Sequences

>NM_003017.5
CCGCCATTTCGTGGACGCCGGGTGAGTGAGAGAGTTGGTTGGTGTTGGGCCGGAGGAAAGCGGGAAGACTCATCGGAGCGTGTGGATTTGAGCCGCCGCATTTTTTAACCCTAGATCTCGAAATGCATCGTGATTCCTGTCCATTGGACTGTAAGGTTTATGTAGGCAATCTTGGAAACAATGGCAACAAGACGGAATTGGAACGGGCTTTTGGCTACTATGGACCACTCCGAAGTGTGTGGGTTGCTAGAAACCCACCCGGCTTTGCTTTTGTTGAATTTGAAGATCCCCGAGATGCAGCTGATGCAGTCCGAGAGCTAGATGGAAGAACACTATGTGGCTGCCGTGTAAGAGTGGAACTGTCGAATGGTGAAAAAAGAAGTAGAAATCGTGGCCCACCTCCCTCTTGGGGTCGTCGCCCTCGAGATGATTATCGTAGGAGGAGTCCTCCACCTCGTCGCAGATCTCCAAGAAGGAGAAGCTTCTCTCGCAGCCGGAGCAGGTCCCTTTCTAGAGATAGGAGAAGAGAGAGATCGCTGTCTCGGGAGAGAAATCACAAGCCGTCCCGATCCTTCTCTAGGTCTCGTAGTCGATCTAGGTCAAATGAAAGGAAATAGAAGACAGTTTGCAAGAGAAGTGGTGTACAGGAAATTACTTCATTTGACAGGAGTATGTACAGAAAATTCAAGTTTTGTTTGAGACTTCATAAGCTTGGTGCATTTTTAAGATGTTTTAGCTGTTCAAATCTGTTTGTCTCTTGAAACAGTGACACAAAGGTGTAATTCTCTATGGTTTGAAATGGATCATACGAGGCATGTAATACCAAGAATTGTTACTTTACAATGTTCCCTTAAGCAAAATTGAATTTGCTTTGAACTTTTAGTTATGCACAGACTGATAATAAACCTCTAAACCTGCCCAGCGGAAGTGTGTTTTTTTTTAAATTTAAATACAGAAACAACTGGCAAAAATTGAACTAAGATTTACTTTTTTTTCCATAGCTGGGATATAGGCTGCAGCTATAGTTGAACAAGCAGTCTTTAAAAACTGCTGTGAAACACAGGCCATCAGGGAAAACGAAATGCTGCACTATTAAATTAGAGGTTTTTGAAAAATCCAACTCTCATCCTGGGCAGAGGTTGCCTAGTTGGTATAGAATGTTAAGTTTCAAGAAAGTTTACCTTTGCTTTAGGTCATAAGTTCCTTATTTGATTGCTGTATATGGATACATGGCTGTTCGTGACATTCTTTATGTGCAAATTTGTGATTTCAAAAATGTCCTGCCAGTTTAAGGGTACATTGTAGAGCCGAACTTTGAGTTACTGTGCAAGATTTTTTTTTCATGCTGTCATTTGTAATATGTTTTGTGAGAATCCTTGGGATTAAAGTTTTGGTTACAAATTGTTCTTTAACTTGAAAGCCTGTTTTTCCTTGCAAACTCAAATCTGTGAGCTTGGTACCAAGTCCAGGTATAACATTCCTATTGGAAGCCATACTTATATTTTCTTGTAAAGTGCTTTTGAATTAATAAAATATTAGCATAATTGTGTATAGTCAGTTGAACCCACTGTTACCATTGTTCTTATCCCATGGGAAGCAGTTGGTTACACGATTCTTATTTTATAAGAAACAGCTGAGAGGCACTATGGATTAGTCTTCTGAAGTGAAGGAAATATAGATGTCACCTAAGTGATAGTTAACCCATTTTTTTTTTTTTTAGGCATAGAAGCCAGTTCAGGGTCCATAATATTTAGTGACCAACATTTTAAAGTATAGCAGCAACCTGGTTCTTAAACACAAAGTAAGTTGCCCATTAACAAATGGCTTTTATCTTTAGCATGAAAACTTTCCACAGGTCTAAAAATTGCTTCCATTTTATAATTTGAGGTGTTGCATGGGAATTCTAAGCTGATCCATCATGATGTAAAAGTTCACAATATGGTTCAAATGTAACAGTGCAGAATTGAATATGGAGGCATGCATAACCTTCCTCTTAGAAAATGGCAGGTGTTGTAATTTCAAATTTTTGTGCAATTAGATTAAATCATAATGCAACAGTCTTGTGGCTTAGTTTCCTTAAATATGCTCTTAAGATAGTTTTGGATTATGCGGTATTGACTGTCTTAAATATGAAAGATAAGTCATTGCATTAAGAGTTCAAGCTAAATGGATACATTAAGATACAGTTCCTAAACAAATTATTTATTTCCACCTTTTACACAAATCTTGGGAGAATTGGTGTCAGGAAGGTTCAGCCTTAAAGTTAAGCATGTTCAAGAAAGACACTTTTCAGACAGCCTGTTTATTTACTGAGAGCTCTGGCATTGGGCATTTTGTCTTTAGTATTCTCACATAGCCTACAACCTGTTCCTGTTAGGAACAAGCCAAGATAGCTAAGAAGTTACGGAAGCCATGCAATATGTCAATTACATTGCTTTTTATAAATGGACAACTTATGTGGGCATTTTTGGGCAGTATATGACTTCCTTGCAGGCTCTTAAGTTGGAAGGGTTTCTGTAAAAAGGACAGTTACGGGTATAATATGGCTAAGAGAAATAATACAGAACCTGAAATAAAAGTAACTTCACCAGGGAGTTATCCTGACTTAGGTGACATACAGTCCCAGTTGGCAGTTACTTTAACCAGGAGCCCTAGCATAACCTCAAGACTCTTAGAAACTTTAGAACATGGAAATTGTTAAAAGCTTTGAATTGCACATTTAGATTGTGGCTATTAGGAATTTTTAAAGTTGTAATTCCTAAAATAACAGGTCACACTAACCGGTCTTGTCCATATTCAGGGTTGAGTGTAAAAATGAAAGGAATCACAAAACTGAACTTAGACCTGTGGTTTAAGGATCAAGGTGTTCACTAGAAGTCACTGTTACTAATACTTGATGACAATGTAAAGAAACATTAAGGATTATATTTGATTGTTTTCAAAGACACTggctggatgtggtggctcacacttgtaattcctagcactttgggaggctagggcgggtgggaggatctcttgaagccaggagttggagaccagtctgcccaacatggcaagattcacatttctattaaaaGGAATATTTAGTTTGATCTCTGGTTCACAGTTCATTGTGGGTTGCTTCTGACCTCCATGTCTTAAGCAGAAAGTAGGGAAGTTGTAGTTTTACCAAGCACAGGTACCCTGTGTCTACCATTTGAGTATCTTAGAGATCCTTACAAACGTGATCCCGTCAGCGTCCATGACACTCCCACCCTGTTAGACTGCTGTCAGTGGCTTTCACACAAACCCATATGTGGATGGAAAATCCAGGTTATTACTACATTCATTTTAGTACAGTGCTGCCTAATTAGAAATTTTGTTGAAGAGGTATTTCAGAATAGATACAGCCAGACTCCAGGCTCATTGACTTAGTTTTTCAGGGTGACCTAACCCTGTGTAATTTTGAGGAGTTCTACATGATAAATACCCTTGGTGATGTGAGAACCACTAGTTTAGTATTTTGTCCAAGTATGCTTTTTTTCAGAGTTCTGAATGAGATTTAGTTGTCATACCTAGTTGGTGGTAATTTCTTAGTTGTATATTTTTGTACTACCAGATTGTTGCCTTCTGGTTTTCCATCTTTTCGAGAAAGATTTCTAGTTAAAGTTACTGAAGAAAAACTGGGTTGGAAGTACATTTTTCTCTAAATAATCCAGTAGTGTTGAATTTGATTTTATGTCCACTCTAATTTTTTTCATCCTGTTTTATTAGGGGGATTCATCGGGTACCTGAAGATAATTCAGCTGTAGACCCCTTAAGGTTCTGAGACAAGGTCATTGAAATTTGTTTTggctgggtgtgatggctcatgcctgtaatcccggtgcattgggaggttgaggcaggtggatcacttgtggtcaggagttggagaccagcttggtcaacatggtgaaaccccgtctctactaacagtacaaaaattagctgggtgtggtggcaggcgcctataatgccagccacttgggaggctgaggcaggagaagtgcttaaacctggtgggtggaggttgccatgagccgagatgtagccacttcactccagcctgagtgaaagcaaaacttcgtctccaaaaaaaaaaaaaaaGTTTGTTTTGGTAAGCCTAGTATAATTGATTAGTTTTGTCCATGCAACTTTCCCCTTGTTGGACTCTGTACTTAATAATACAGTATTTAGATTCTCA