Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl31
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L31
Also known as -
Coordinate chr9:46086959-46090444
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Located in nucleolus and nucleoplasm. Part of cytosolic large ribosomal subunit. Orthologous to human RPL31 (ribosomal protein L31). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl31

Retroname Coord Strand Genomic Region ENSG
Rpl31P1 chr1:105619295-105619725 + Intragenic
N/A UCSC
Rpl31P2 chr1:166449772-166449935 + Intragenic
N/A UCSC
Rpl31P3 chr1:178853817-178854235 - Intragenic
N/A UCSC
Rpl31P4 chr1:226618106-226618538 + Intergenic
N/A UCSC
Rpl31P5 chr1:232820468-232820893 - Intergenic
N/A UCSC
Rpl31P6 chr1:262898730-262899151 - Intragenic
Intragenic
N/A UCSC
Rpl31P7 chr1:265566794-265567215 + Intragenic
N/A UCSC
Rpl31P8 chr1:36777108-36777801 + Intergenic
N/A UCSC
Rpl31P9 chr1:83679622-83679929 - Intergenic
N/A UCSC
Rpl31P10 chr1:9980282-9980718 - Intergenic
N/A UCSC
Rpl31P11 chr2:125983265-125983682 - Intergenic
N/A UCSC
Rpl31P12 chr2:138489341-138489775 + Intergenic
N/A UCSC
Rpl31P13 chr2:185793357-185793578 - Intragenic
N/A UCSC
Rpl31P14 chr2:197939986-197940311 - Intergenic
N/A UCSC
Rpl31P15 chr2:209656003-209656338 + Intergenic
N/A UCSC
Rpl31P16 chr2:22010846-22011203 - Intragenic
N/A UCSC
Rpl31P17 chr2:233955864-233956139 + Intergenic
N/A UCSC
Rpl31P18 chr2:45658081-45658246 - Intergenic
N/A UCSC
Rpl31P19 chr2:56764338-56764723 - Intergenic
N/A UCSC
Rpl31P20 chr3:122816926-122817334 + Intergenic
N/A UCSC
Rpl31P21 chr3:94812433-94812707 + Intergenic
N/A UCSC
Rpl31P22 chr4:116132261-116132700 + Intergenic
N/A UCSC
Rpl31P23 chr4:155702621-155703043 - Intergenic
N/A UCSC
Rpl31P24 chr4:177100667-177100942 + Intragenic
N/A UCSC
Rpl31P25 chr4:180050486-180050632 + Intergenic
N/A UCSC
Rpl31P26 chr4:31704721-31705149 + Intragenic
N/A UCSC
Rpl31P27 chr4:80257079-80257295 + Intergenic
N/A UCSC
Rpl31P28 chr4:82060444-82060856 + Intergenic
N/A UCSC
Rpl31P29 chr5:22870066-22870460 - Intergenic
N/A UCSC
Rpl31P30 chr5:48682239-48682669 - Intragenic
N/A UCSC
Rpl31P31 chr5:61042517-61042928 - Intragenic
N/A UCSC
Rpl31P32 chr5:78392675-78393111 - Intragenic
N/A UCSC
Rpl31P33 chr5:83647641-83648068 - Intergenic
N/A UCSC
Rpl31P34 chr5:97964420-97964848 + Intergenic
N/A UCSC
Rpl31P35 chr6:11580568-11580990 - Intergenic
N/A UCSC
Rpl31P36 chr6:135455967-135456519 - Intergenic
N/A UCSC
Rpl31P37 chr6:42464441-42464867 + Intergenic
N/A UCSC
Rpl31P38 chr6:43934538-43934949 + Intergenic
N/A UCSC
Rpl31P39 chr6:8165698-8166085 - Intergenic
N/A UCSC
Rpl31P40 chr6:95972974-95973482 + Intergenic
N/A UCSC
Rpl31P41 chr6:98451960-98452368 + Intragenic
N/A UCSC
Rpl31P42 chr7:119825519-119825775 - Intragenic
N/A UCSC
Rpl31P43 chr7:11983603-11984042 + Intergenic
N/A UCSC
Rpl31P44 chr7:35549833-35550271 - Intergenic
N/A UCSC
Rpl31P45 chr7:37918519-37918850 + Intergenic
N/A UCSC
Rpl31P46 chr7:50579789-50580215 + Intragenic
N/A UCSC
Rpl31P47 chr7:80457422-80457840 - Intragenic
N/A UCSC
Rpl31P48 chr7:94813674-94813936 + Intragenic
N/A UCSC
Rpl31P49 chr7:97773759-97774156 + Intergenic
N/A UCSC
Rpl31P50 chr8:104155367-104155798 - Intragenic
N/A UCSC
Rpl31P51 chr8:40174786-40175217 - Intergenic
N/A UCSC
Rpl31P52 chr8:93126738-93127067 + Intergenic
N/A UCSC
Rpl31P53 chr8:99430308-99430711 - Intergenic
N/A UCSC
Rpl31P54 chr9:2107502-2107928 + Intergenic
N/A UCSC
Rpl31P55 chr9:60923295-60923731 - Intragenic
N/A UCSC
Rpl31P56 chr9:94217682-94218044 - Intergenic
N/A UCSC
Rpl31P57 chr10:2074994-2075405 + Intergenic
N/A UCSC
Rpl31P58 chr10:34355731-34356168 + Intergenic
N/A UCSC
Rpl31P59 chr10:95555960-95556330 + Intragenic
N/A UCSC
Rpl31P60 chr11:47793310-47793535 + Intergenic
N/A UCSC
Rpl31P61 chr11:65322749-65323040 + Intragenic
N/A UCSC
Rpl31P62 chr11:72680497-72680745 - Intergenic
N/A UCSC
Rpl31P63 chr11:81682270-81682603 - Intergenic
N/A UCSC
Rpl31P64 chr11:87658724-87659158 + Intragenic
N/A UCSC
Rpl31P65 chr12:19159467-19159901 - Intergenic
N/A UCSC
Rpl31P66 chr13:105509869-105510241 - Intragenic
N/A UCSC
Rpl31P67 chr13:53283829-53284262 + Intergenic
N/A UCSC
Rpl31P68 chr13:64719688-64719962 - Intergenic
N/A UCSC
Rpl31P69 chr13:89987296-89987714 - Intragenic
N/A UCSC
Rpl31P70 chr13:96691151-96691558 - Intergenic
N/A UCSC
Rpl31P71 chr14:104026140-104026569 - Intergenic
N/A UCSC
Rpl31P72 chr15:106794320-106794755 - Intergenic
N/A UCSC
Rpl31P73 chr15:28439296-28439727 + Intergenic
N/A UCSC
Rpl31P74 chr15:52712590-52713004 - Intergenic
N/A UCSC
Rpl31P75 chr15:57931225-57931658 - Intergenic
N/A UCSC
Rpl31P76 chr18:31568870-31569290 - Intergenic
N/A UCSC
Rpl31P77 chr18:40087797-40088233 + Intragenic
N/A UCSC
Rpl31P78 chr18:52777617-52778052 - Intergenic
N/A UCSC
Rpl31P79 chr18:59479762-59480198 + Intergenic
N/A UCSC
Rpl31P80 chr18:69815974-69816400 + Intergenic
N/A UCSC
Rpl31P81 chr19:41207676-41208037 - Intragenic
N/A UCSC
Rpl31P82 chr20:15897274-15897606 - Intragenic
N/A UCSC
Rpl31P83 chr20:49128321-49128540 + Intergenic
N/A UCSC
Rpl31P84 chrX:15001633-15002071 + Intragenic
N/A UCSC
Rpl31P85 chrX:22183656-22184079 + Intergenic
N/A UCSC
Rpl31P86 chrX:84115036-84115454 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_022506.3
TCCTTTCCAACTTGGGCCCGGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGAGAATACACCATCAACATTCACAAACGCATCCATGGAGTGGGCTTCAAGAAGCGTGCTCCTCGGGCACTCAAAGAAATTCGGAAATTTGCCATGAAGGAGATGGGAACTCCAGATGTGCGCATAGACACCAGGCTCAATAAAGCCGTCTGGGCCAAAGGAATAAGGAATGTTCCGTACCGCATCCGAGTACGTTTGTCCAGAAAGCGTAATGAGGATGAGGATTCACCAAACAAGCTCTACACACTGGTAACTTACGTGCCTGTTACCACATTCAAAAATCTACAGACGGTCAATGTGGATGAGAACTAACTGCTGAATGTCAAATAAAGTTACAGAATTGCCTCC