Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl27
Plot displaying the genomic locations of a parental gene (in chr10) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L27
Also known as -
Coordinate chr10:89352864-89356563
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Involved in response to aldosterone. Located in ribosome. Part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 16. Orthologous to human RPL27 (ribosomal protein L27). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl27

Retroname Coord Strand Genomic Region ENSG
Rpl27P1 chr1:132194381-132194719 - Intergenic
N/A UCSC
Rpl27P2 chr1:163813945-163814171 - Intergenic
N/A UCSC
Rpl27P3 chr1:204513939-204514398 + Intergenic
N/A UCSC
Rpl27P4 chr1:42792623-42793019 - Intergenic
N/A UCSC
Rpl27P5 chr1:88126371-88126802 - Intergenic
N/A UCSC
Rpl27P6 chr2:206184030-206184306 + Intergenic
N/A UCSC
Rpl27P7 chr2:80920343-80920764 - Intergenic
N/A UCSC
Rpl27P8 chr3:59916015-59916457 + Intragenic
N/A UCSC
Rpl27P9 chr4:115471390-115471819 - Intergenic
N/A UCSC
Rpl27P10 chr4:50289863-50290313 + Intergenic
N/A UCSC
Rpl27P11 chr4:54029529-54029691 + Intergenic
N/A UCSC
Rpl27P12 chr5:57717708-57718010 - Intergenic
N/A UCSC
Rpl27P13 chr5:90943824-90944127 - Intragenic
N/A UCSC
Rpl27P14 chr6:37364036-37364483 - Intergenic
N/A UCSC
Rpl27P15 chr6:39785289-39785682 + Intergenic
N/A UCSC
Rpl27P16 chr6:75743378-75743535 + Intergenic
N/A UCSC
Rpl27P17 chr7:109640791-109641100 - Intergenic
N/A UCSC
Rpl27P18 chr8:111039660-111040093 + Intergenic
N/A UCSC
Rpl27P19 chr8:112403298-112403611 + Intergenic
N/A UCSC
Rpl27P20 chr8:113575611-113576246 - Intragenic
N/A UCSC
Rpl27P21 chr8:76239549-76240010 - Intergenic
N/A UCSC
Rpl27P22 chr8:80662746-80663207 + Intergenic
N/A UCSC
Rpl27P23 chr11:17853819-17854278 - Intergenic
N/A UCSC
Rpl27P24 chr11:64472068-64472516 + Intergenic
N/A UCSC
Rpl27P25 chr12:37194654-37195031 + Intragenic
N/A UCSC
Rpl27P26 chr15:45966470-45966912 - Intergenic
N/A UCSC
Rpl27P27 chr15:82581470-82581919 - Intergenic
N/A UCSC
Rpl27P28 chr16:1964002-1964436 - Intergenic
N/A UCSC
Rpl27P29 chr17:18350775-18351238 - Intergenic
N/A UCSC
Rpl27P30 chr19:37154336-37154705 - Intragenic
Intragenic
N/A UCSC
Rpl27P31 chr19:57775140-57775591 - Intragenic
N/A UCSC
Rpl27P32 chr20:31147091-31147533 - Intragenic
N/A UCSC
Rpl27P33 chrX:127837107-127837464 - Intergenic
N/A UCSC
Rpl27P34 chrX:140845428-140845749 - Intergenic
N/A UCSC
Rpl27P35 chrX:16115558-16115883 - Intergenic
N/A UCSC
Rpl27P36 chrX:29964801-29965074 + Intergenic
N/A UCSC
Rpl27P37 chrX:68824083-68824337 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_022514.1
CTGCTCGCAGTCGAAATGGGCAAGTTTATGAAACCCGGGAAAGTGGTGCTGGTCCTGGCTGGACGCTACTCCGGACGCAAAGCCGTCATCGTAAAGAACATTGATGATGGCACCTCCGACCGCCCTTACAGCCATGCCCTGGTGGCTGGAATTGACCGCTATCCCAGAAAAGTGACAGCTGCCATGGGCAAGAAGAAGATCGCCAAGCGATCCAAGATCAAGTCCTTTGTGAAAGTTTATAACTACAACCACCTCATGCCCACAAGGTACTCTGTGGATATCCCCTTGGACAAAACTGTTGTCAACAAGGATGTGTTCAGAGACCCAGCACTGAAACGCAAGGCCAGGCGGGAGGCCAAGGTCAAGTTTGAGGAGCGATACAAGACAGGGAAGAACAAATGGTTTTTCCAGAAGCTTCGCTTTTAGATGTATTTTTGTTTTCGTCATTAAAAAAATAAAAAAT